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Aliases for HSPE1P1 Gene

Subcategory (RNA class) for HSPE1P1 Gene

lncRNA

Aliases for HSPE1P1 Gene

  • Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 1 2 3 5
  • Heat Shock 10kDa Protein 1 Pseudogene 1 2 3
  • Heat Shock 10kDa Protein 1 (Chaperonin 10) Pseudogene 1 3
  • Heat Shock 10kD Protein 1 (Chaperonin 10) Psuedogene 1 2
  • Heat Shock 10kD Protein 1 (Chaperonin 10) Pseudogene 1 3
  • BA101E14.1 3
  • HSPEP1 3

External Ids for HSPE1P1 Gene

ORGUL Members for HSPE1P1 Gene

Previous HGNC Symbols for HSPE1P1 Gene

  • HSPEP1

Previous GeneCards Identifiers for HSPE1P1 Gene

  • GC20M038562

Summaries for HSPE1P1 Gene

GeneCards Summary for HSPE1P1 Gene

HSPE1P1 (Heat Shock Protein Family E (Hsp10) Member 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPE1P1 Gene

Genomics for HSPE1P1 Gene

Regulatory Elements for HSPE1P1 Gene

Enhancers for HSPE1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G039952 0.6 VISTA 0.4 -19.6 -19574 1.1 HLF TEAD3 NFIL3 ZNF629 GLIS1 ZNF600 SMAD4 HNRNPL PRDM1 GC20P039952 HSPE1P1
GH20G039892 0.8 Ensembl ENCODE 0.3 +39.8 39791 1.7 CTCF GATA3 RAD21 MAFK GC20M039827 HSPE1P1
GH20G039886 0.9 Ensembl ENCODE 0.2 +47.0 47039 0.4 CTCF HCFC1 BHLHE40 TEAD4 MAX TRIM22 SIX5 MNT RAD21 FOXA1 GC20M039827 HSPE1P1
GH20G039896 0.6 ENCODE 0.3 +35.6 35632 1.8 ZBTB21 RAD21 FOXK2 IKZF1 HNF4A FOS PRDM1 NFE2L2 HSPE1P1 GC20M039827
GH20G039874 0.8 ENCODE 0.2 +59.0 59006 0.2 CTCF MXI1 WRNIP1 MAX RAD21 RFX5 RELA POLR2A ZNF143 SMC3 GC20M039827 HSPE1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HSPE1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HSPE1P1 Gene

Chromosome:
20
Start:
39,932,922 bp from pter
End:
39,933,239 bp from pter
Size:
318 bases
Orientation:
Minus strand

Genomic View for HSPE1P1 Gene

Genes around HSPE1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPE1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPE1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPE1P1 Gene

Proteins for HSPE1P1 Gene

Post-translational modifications for HSPE1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPE1P1 Gene

Domains & Families for HSPE1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPE1P1 Gene

Function for HSPE1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPE1P1 Gene

Localization for HSPE1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HSPE1P1 Gene

Pathways & Interactions for HSPE1P1 Gene

SuperPathways for HSPE1P1 Gene

No Data Available

Interacting Proteins for HSPE1P1 Gene

Gene Ontology (GO) - Biological Process for HSPE1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPE1P1 Gene

Transcripts for HSPE1P1 Gene

mRNA/cDNA for HSPE1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSPE1P1 Gene

No ASD Table

Relevant External Links for HSPE1P1 Gene

GeneLoc Exon Structure for
HSPE1P1
ECgene alternative splicing isoforms for
HSPE1P1

Expression for HSPE1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPE1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSPE1P1 Gene:

HSPE1P1
genes like me logo Genes that share expression patterns with HSPE1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPE1P1 Gene

Orthologs for HSPE1P1 Gene

Evolution for HSPE1P1 Gene

ENSEMBL:
Gene Tree for HSPE1P1 (if available)
TreeFam:
Gene Tree for HSPE1P1 (if available)

No data available for Orthologs for HSPE1P1 Gene

Paralogs for HSPE1P1 Gene

No data available for Paralogs for HSPE1P1 Gene

Variants for HSPE1P1 Gene

Relevant External Links for HSPE1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPE1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPE1P1 Gene

Disorders for HSPE1P1 Gene

Relevant External Links for HSPE1P1

Genetic Association Database (GAD)
HSPE1P1

No disorders were found for HSPE1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HSPE1P1 Gene

Publications for HSPE1P1 Gene

  1. Citalopram and escitalopram plasma drug and metabolite concentrations: genome-wide associations. (PMID: 24528284) Ji Y. … Weinshilboum R.M. (Br J Clin Pharmacol 2014) 3 64
  2. Genome-wide association study does not reveal major genetic determinants for anti-cytomegalovirus antibody response. (PMID: 21993531) Kuparinen T. … Hurme M. (Genes Immun. 2012) 46 64
  3. Wnt signaling and Dupuytren's disease. (PMID: 21732829) Dolmans G.H. … . (N. Engl. J. Med. 2011) 46 64
  4. Biological, clinical and population relevance of 95 loci for blood lipids. (PMID: 20686565) Teslovich T.M. … Kathiresan S. (Nature 2010) 46 64
  5. Common variants at 30 loci contribute to polygenic dyslipidemia. (PMID: 19060906) Kathiresan S. … Cupples L.A. (Nat. Genet. 2009) 46 64

Products for HSPE1P1 Gene

Sources for HSPE1P1 Gene

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