Free for academic non-profit institutions. Other users need a Commercial license

HSPD1P6 Gene(Pseudogene)

Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 6

GCID:
GC03M036766
GIFtS:
10
Genes Participants
UDN Logo

Aliases for HSPD1P6 Gene

Aliases for HSPD1P6 Gene

  • Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 6 2 3 5
  • Heat Shock 60kDa Protein 1 (Chaperonin) Pseudogene 6 2 3
  • Heat Shock 60kD Protein 1 (Chaperonin) Pseudogene 6 2 3
  • HSPD1-6P 3
  • HSPDP6 3

External Ids for HSPD1P6 Gene

Previous HGNC Symbols for HSPD1P6 Gene

  • HSPDP6

Previous GeneCards Identifiers for HSPD1P6 Gene

  • GC03M036785

Summaries for HSPD1P6 Gene

GeneCards Summary for HSPD1P6 Gene

HSPD1P6 (Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 6) is a Pseudogene.

Additional gene information for HSPD1P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPD1P6 Gene

Genomics for HSPD1P6 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for HSPD1P6 Gene

Promoters and enhancers for HSPD1P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH03I036783 Enhancer 0.2 ENCODE 577.9 -0.3 -310 1.6 HSPD1P6 LOC105377030 DCLK3 LINC02033
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HSPD1P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSPD1P6 Gene

Genomic Locations for HSPD1P6 Gene
chr3:36,766,643-36,784,167
(GRCh38/hg38)
Size:
17,525 bases
Orientation:
Minus strand
chr3:36,808,291-36,825,658
(GRCh37/hg19)

Genomic View for HSPD1P6 Gene

Genes around HSPD1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPD1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPD1P6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HSPD1P6 Gene

Proteins for HSPD1P6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HSPD1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPD1P6 Gene

Domains & Families for HSPD1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPD1P6 Gene

Function for HSPD1P6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPD1P6 Gene

Localization for HSPD1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSPD1P6 Gene

Pathways & Interactions for HSPD1P6 Gene

SuperPathways for HSPD1P6 Gene

PathCards logo More details on SuperPathways for HSPD1P6
No Data Available

Interacting Proteins for HSPD1P6 Gene

Gene Ontology (GO) - Biological Process for HSPD1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPD1P6 Gene

Drugs & Compounds for HSPD1P6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HSPD1P6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for HSPD1P6 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSPD1P6 Gene

No ASD Table

Relevant External Links for HSPD1P6 Gene

GeneLoc Exon Structure for
HSPD1P6
ECgene alternative splicing isoforms for
HSPD1P6

Expression for HSPD1P6 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPD1P6 Gene

mRNA expression in normal human tissues for HSPD1P6 Gene
mRNA expression by GTEx for HSPD1P6 Gene

mRNA differential expression in normal tissues according to GTEx for HSPD1P6 Gene

This gene is overexpressed in Bladder (x14.6) and Nerve - Tibial (x7.8).

NURSA nuclear receptor signaling pathways regulating expression of HSPD1P6 Gene:

HSPD1P6
genes like me logo Genes that share expression patterns with HSPD1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPD1P6 Gene

Orthologs for HSPD1P6 Gene

Evolution for HSPD1P6 Gene

ENSEMBL:
Gene Tree for HSPD1P6 (if available)
TreeFam:
Gene Tree for HSPD1P6 (if available)

No data available for Orthologs for HSPD1P6 Gene

Paralogs for HSPD1P6 Gene

No data available for Paralogs for HSPD1P6 Gene

Variants for HSPD1P6 Gene

Additional Variant Information for HSPD1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPD1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPD1P6 Gene

Disorders for HSPD1P6 Gene

Additional Disease Information for HSPD1P6

Genetic Association Database
(GAD)

No disorders were found for HSPD1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HSPD1P6 Gene

Publications for HSPD1P6 Gene

  1. Genome-wide association study meta-analysis of European and Asian-ancestry samples identifies three novel loci associated with bipolar disorder. (PMID: 22182935) Chen DT … Strauss J (Molecular psychiatry 2013) 44 58
  2. Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. (PMID: 21926972) Psychiatric GWAS Consortium Bipolar Disorder Working Group (Nature genetics 2011) 44 58
  3. Genome-wide association study identifies five new schizophrenia loci. (PMID: 21926974) Schizophrenia Psychiatric Genome-Wide Association Study (GWAS) Consortium (Nature genetics 2011) 44 58
  4. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K … Brocchieri L (BMC evolutionary biology 2010) 3 58
  5. Nucleotide sequences and novel structural features of human and Chinese hamster hsp60 (chaperonin) gene families. (PMID: 1980192) Venner TJ … Gupta RS (DNA and cell biology 1990) 3 58

Products for HSPD1P6 Gene

Sources for HSPD1P6 Gene

Content
Loading form....