Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HSPD1P4 Gene

Aliases for HSPD1P4 Gene

  • Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 4 2 3 5
  • Heat Shock 60kDa Protein 1 (Chaperonin) Pseudogene 4 2 3
  • HSPD1-5P 3

External Ids for HSPD1P4 Gene

Previous GeneCards Identifiers for HSPD1P4 Gene

  • GC12P055194
  • GC12P056904

Summaries for HSPD1P4 Gene

GeneCards Summary for HSPD1P4 Gene

HSPD1P4 (Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 4) is a Pseudogene.

Additional gene information for HSPD1P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPD1P4 Gene

Genomics for HSPD1P4 Gene

GeneHancer (GH) Regulatory Elements for HSPD1P4 Gene

Promoters and enhancers for HSPD1P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I056150 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 28.7 -357.6 -357623 4.9 HDGF FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 MYL6B IKZF4 PHC1P1 ENSG00000257740 HSPD1P4 NEMP1 PAN2 SMARCC2 DNAJC14 ANKRD52
GH12I057109 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 26.6 +600.3 600313 3.8 CLOCK FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF416 ZNF143 ZNF548 MCM3 STAT6 NEMP1 EEF1AKMT3 ENSG00000257740 BAZ2A PAN2 SMARCC2 ANKRD52 CDK4 CTDSP2
GH12I055715 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 13.9 -792.3 -792269 7.1 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 RDH5 BLOC1S1 PIR49113 PIR46127 BAZ2A DNAJC14 RN7SL809P TMEM198B PAN2 CDK2
GH12I056187 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 16 -321.5 -321485 3.5 MLX DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 ZNF610 ENSG00000258199 SMARCC2 GC12P056192 TRS-CGA4-1 NEMP1 ENSG00000257740 IKZF4 ANKRD52 PHC1P1 BAZ2A
GH12I056156 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 13.9 -351.0 -351006 6.4 FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 NFYC ZFP41 MEF2D ENSG00000257809 MYL6 NEMP1 BAZ2A DNAJC14 TMEM198B ZC3H10 RN7SL809P ENSG00000257740 SMARCC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HSPD1P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSPD1P4 Gene

Genomic Locations for HSPD1P4 Gene
chr12:56,510,941-56,513,190
(GRCh38/hg38)
Size:
2,250 bases
Orientation:
Plus strand
chr12:56,904,725-56,906,974
(GRCh37/hg19)

Genomic View for HSPD1P4 Gene

Genes around HSPD1P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPD1P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPD1P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPD1P4 Gene

Proteins for HSPD1P4 Gene

Post-translational modifications for HSPD1P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPD1P4 Gene

Domains & Families for HSPD1P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPD1P4 Gene

Function for HSPD1P4 Gene

Phenotypes From GWAS Catalog for HSPD1P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPD1P4 Gene

Localization for HSPD1P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSPD1P4 Gene

Pathways & Interactions for HSPD1P4 Gene

SuperPathways for HSPD1P4 Gene

No Data Available

Interacting Proteins for HSPD1P4 Gene

Gene Ontology (GO) - Biological Process for HSPD1P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPD1P4 Gene

Drugs & Compounds for HSPD1P4 Gene

No Compound Related Data Available

Transcripts for HSPD1P4 Gene

mRNA/cDNA for HSPD1P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSPD1P4 Gene

No ASD Table

Relevant External Links for HSPD1P4 Gene

GeneLoc Exon Structure for
HSPD1P4
ECgene alternative splicing isoforms for
HSPD1P4

Expression for HSPD1P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPD1P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSPD1P4 Gene:

HSPD1P4
genes like me logo Genes that share expression patterns with HSPD1P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPD1P4 Gene

Orthologs for HSPD1P4 Gene

Evolution for HSPD1P4 Gene

ENSEMBL:
Gene Tree for HSPD1P4 (if available)
TreeFam:
Gene Tree for HSPD1P4 (if available)

No data available for Orthologs for HSPD1P4 Gene

Paralogs for HSPD1P4 Gene

No data available for Paralogs for HSPD1P4 Gene

Variants for HSPD1P4 Gene

Additional Variant Information for HSPD1P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPD1P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPD1P4 Gene

Disorders for HSPD1P4 Gene

No disorders were found for HSPD1P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPD1P4 Gene

Publications for HSPD1P4 Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K … Brocchieri L (BMC evolutionary biology 2010) 3 58

Products for HSPD1P4 Gene

Sources for HSPD1P4 Gene

Content
Loading form....