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Aliases for HSPD1P11 Gene

Subcategory (RNA class) for HSPD1P11 Gene

lncRNA

Aliases for HSPD1P11 Gene

  • Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 11 2 3 5
  • Heat Shock 60kDa Protein 1 (Chaperonin) Pseudogene 11 2 3
  • HSPD1-11P 3

External Ids for HSPD1P11 Gene

ORGUL Members for HSPD1P11 Gene

Previous GeneCards Identifiers for HSPD1P11 Gene

  • GC00U923108
  • GC05U901154
  • GC05P090295
  • GC05P095105

Summaries for HSPD1P11 Gene

GeneCards Summary for HSPD1P11 Gene

HSPD1P11 (Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPD1P11 Gene

Genomics for HSPD1P11 Gene

Regulatory Elements for HSPD1P11 Gene

Enhancers for HSPD1P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G095807 1.5 Ensembl ENCODE dbSUPER 8 +41.2 41154 5.4 WRNIP1 ARID4B SIN3A DMAP1 ZNF48 GATA2 ELK1 ZNF263 SP5 MXD4 ENSG00000251409 LINC01554 ENSG00000250240 RHOBTB3 LOC105379091 SPATA9 HSPD1P11 GLRX
GH05G095814 1.3 ENCODE dbSUPER 6.5 +51.0 50987 10.4 HDGF PKNOX1 FOXA2 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 YBX1 ZNF2 LINC01554 ENSG00000251409 ENSG00000250240 RHOBTB3 GLRX LOC105379091 SPATA9 HSPD1P11 LOC100528061
GH05G095773 1.4 Ensembl ENCODE dbSUPER 0.7 +4.7 4743 1.5 HDAC1 FOS ZBTB2 CEBPB ZEB2 ZNF592 POLR2H NFIC MAFF RAD51 RHOBTB3 LINC01554 ENSG00000250240 GLRX ENSG00000251409 SPATA9 HSPD1P11
GH05G095770 1.1 ENCODE dbSUPER 0.7 +2.5 2491 1.3 ELF3 ARID4B RAD21 RARA YY1 PAF1 KAT8 HMBOX1 HNF4A KDM1A RHOBTB3 LINC01554 GLRX ENSG00000250240 ENSG00000251409 SPATA9 HSPD1P11
GH05G095757 1.5 Ensembl ENCODE dbSUPER 0.4 -8.5 -8530 5.7 PKNOX1 FOXA2 MLX SIN3A ARID4B FEZF1 YY1 TCF12 GATA2 FOS RHOBTB3 ENSG00000250240 GLRX SPATA9 ENSG00000251409 LINC01554 HSPD1P11
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HSPD1P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for HSPD1P11 Gene

Chromosome:
5
Start:
95,768,999 bp from pter
End:
95,771,187 bp from pter
Size:
2,189 bases
Orientation:
Plus strand

Genomic View for HSPD1P11 Gene

Genes around HSPD1P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPD1P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPD1P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPD1P11 Gene

Proteins for HSPD1P11 Gene

Post-translational modifications for HSPD1P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPD1P11 Gene

Domains & Families for HSPD1P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPD1P11 Gene

Function for HSPD1P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPD1P11 Gene

Localization for HSPD1P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HSPD1P11 Gene

Pathways & Interactions for HSPD1P11 Gene

SuperPathways for HSPD1P11 Gene

No Data Available

Interacting Proteins for HSPD1P11 Gene

Gene Ontology (GO) - Biological Process for HSPD1P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPD1P11 Gene

Drugs & Compounds for HSPD1P11 Gene

No Compound Related Data Available

Transcripts for HSPD1P11 Gene

mRNA/cDNA for HSPD1P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSPD1P11 Gene

No ASD Table

Relevant External Links for HSPD1P11 Gene

GeneLoc Exon Structure for
HSPD1P11
ECgene alternative splicing isoforms for
HSPD1P11

Expression for HSPD1P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSPD1P11 Gene

mRNA differential expression in normal tissues according to GTEx for HSPD1P11 Gene

This gene is overexpressed in Pancreas (x7.8) and Ovary (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of HSPD1P11 Gene:

HSPD1P11
genes like me logo Genes that share expression patterns with HSPD1P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSPD1P11 Gene

Orthologs for HSPD1P11 Gene

Evolution for HSPD1P11 Gene

ENSEMBL:
Gene Tree for HSPD1P11 (if available)
TreeFam:
Gene Tree for HSPD1P11 (if available)

No data available for Orthologs for HSPD1P11 Gene

Paralogs for HSPD1P11 Gene

No data available for Paralogs for HSPD1P11 Gene

Variants for HSPD1P11 Gene

Relevant External Links for HSPD1P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPD1P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPD1P11 Gene

Disorders for HSPD1P11 Gene

No disorders were found for HSPD1P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPD1P11 Gene

Publications for HSPD1P11 Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64
  2. The DNA sequence and comparative analysis of human chromosome 5. (PMID: 15372022) Schmutz J. … Rubin E.M. (Nature 2004) 3 64
  3. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) (Nature 2004) 3 64
  4. Initial sequencing and analysis of the human genome. (PMID: 11237011) Lander E.S. … Szustakowki J. (Nature 2001) 3 64

Products for HSPD1P11 Gene

Sources for HSPD1P11 Gene

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