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Aliases for HSPD1P11 Gene

Subcategory (RNA class) for HSPD1P11 Gene

lncRNA

Aliases for HSPD1P11 Gene

  • Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 11 2 3 5
  • Heat Shock 60kDa Protein 1 (Chaperonin) Pseudogene 11 2 3
  • HSPD1-11P 3

External Ids for HSPD1P11 Gene

ORGUL Members for HSPD1P11 Gene

Previous GeneCards Identifiers for HSPD1P11 Gene

  • GC00U923108
  • GC05U901154
  • GC05P090295
  • GC05P095105

Summaries for HSPD1P11 Gene

GeneCards Summary for HSPD1P11 Gene

HSPD1P11 (Heat Shock Protein Family D (Hsp60) Member 1 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPD1P11 Gene

Genomics for HSPD1P11 Gene

Regulatory Elements for HSPD1P11 Gene

Enhancers for HSPD1P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F095709 1.7 FANTOM5 Ensembl ENCODE 10 -57.6 -57614 4.5 HDGF PKNOX1 ARNT SIN3A FEZF1 ZNF2 CBX5 ZNF143 FOS DEK HSPD1P11 SPATA9 TTC37 RHOBTB3
GH05F096699 1.4 Ensembl ENCODE 9.9 +936.0 936012 11.6 CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 ZNF548 ENSG00000248734 RIOK2 ERAP1 CAST ENSG00000249180 HSPD1P11 LOC101929710
GH05F095807 1.2 Ensembl ENCODE 8 +41.2 41154 5.4 WRNIP1 SIN3A ARID4B DMAP1 ZNF48 ELK1 GATA2 ZNF263 SP5 MXD4 ENSG00000251409 LINC01554 ENSG00000250240 RHOBTB3 LOC105379091 SPATA9 HSPD1P11 GLRX
GH05F096584 0.9 Ensembl 9.9 +815.9 815940 1.0 ZFP64 ZNF121 ZNF366 ZNF138 ZNF680 ZNF654 ZBTB11 CEBPB REST ZNF623 RIOK2 ENSG00000248734 ERAP1 HSPD1P11 CAST ENSG00000249180
GH05F095814 1.1 ENCODE 6.5 +51.0 50987 10.4 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 LINC01554 ENSG00000251409 ENSG00000250240 RHOBTB3 GLRX LOC105379091 SPATA9 HSPD1P11 LOC100528061
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HSPD1P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for HSPD1P11 Gene

Chromosome:
5
Start:
95,768,999 bp from pter
End:
95,771,187 bp from pter
Size:
2,189 bases
Orientation:
Plus strand

Genomic View for HSPD1P11 Gene

Genes around HSPD1P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSPD1P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSPD1P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPD1P11 Gene

Proteins for HSPD1P11 Gene

Post-translational modifications for HSPD1P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSPD1P11 Gene

Domains & Families for HSPD1P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSPD1P11 Gene

Function for HSPD1P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSPD1P11 Gene

Localization for HSPD1P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HSPD1P11 Gene

Pathways & Interactions for HSPD1P11 Gene

SuperPathways for HSPD1P11 Gene

No Data Available

Interacting Proteins for HSPD1P11 Gene

Gene Ontology (GO) - Biological Process for HSPD1P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSPD1P11 Gene

Transcripts for HSPD1P11 Gene

mRNA/cDNA for HSPD1P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HSPD1P11 Gene

No ASD Table

Relevant External Links for HSPD1P11 Gene

GeneLoc Exon Structure for
HSPD1P11
ECgene alternative splicing isoforms for
HSPD1P11

Expression for HSPD1P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HSPD1P11 Gene

mRNA differential expression in normal tissues according to GTEx for HSPD1P11 Gene

This gene is overexpressed in Pancreas (x7.8) and Ovary (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of HSPD1P11 Gene:

HSPD1P11
genes like me logo Genes that share expression patterns with HSPD1P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HSPD1P11 Gene

Orthologs for HSPD1P11 Gene

Evolution for HSPD1P11 Gene

ENSEMBL:
Gene Tree for HSPD1P11 (if available)
TreeFam:
Gene Tree for HSPD1P11 (if available)

No data available for Orthologs for HSPD1P11 Gene

Paralogs for HSPD1P11 Gene

No data available for Paralogs for HSPD1P11 Gene

Variants for HSPD1P11 Gene

Relevant External Links for HSPD1P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSPD1P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSPD1P11 Gene

Disorders for HSPD1P11 Gene

No disorders were found for HSPD1P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSPD1P11 Gene

Publications for HSPD1P11 Gene

  1. Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. (PMID: 20193073) Mukherjee K. … Brocchieri L. (BMC Evol. Biol. 2010) 3 64
  2. The DNA sequence and comparative analysis of human chromosome 5. (PMID: 15372022) Schmutz J. … Rubin E.M. (Nature 2004) 3 64
  3. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) (Nature 2004) 3 64
  4. Initial sequencing and analysis of the human genome. (PMID: 11237011) Lander E.S. … Szustakowki J. (Nature 2001) 3 64

Products for HSPD1P11 Gene

Sources for HSPD1P11 Gene

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