HSP90AB1 Gene
protein-coding GIFtS : 62
GC06P044324
heat shock protein 90kDa alpha (cytosolic), class B member 1 (Previous names: heat shock 90kD protein 1, beta, heat shock 90kDa protein 1, beta )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbols: HSPC2, HSPCB )
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Aliases & Descriptions for HSP90AB1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases D6S182 2 FLJ26984 2 HSP90-BETA 2 HSP90B 2 , 3 , 5 HSPC2 2 , 3 , 5 HSPCB 2 , 3 , 5 OTTHUMP00000016517 2 OTTHUMP00000016518 2 OTTHUMP00000016519 2 OTTHUMP00000039869 2
Descriptions HSP 84 3 HSP 90 3 heat shock 90kD protein 1, beta 1 , 2 heat shock 90kDa protein 1, beta 1 , 2 heat shock protein 90kDa alpha (cytosolic), class B member 1 2 heat shock protein beta 2
Search outside databases for aliases for HSP90AB1 genePrevious GC identifer: GC06P044323
Summaries for HSP90AB1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for HSP90AB1 : HSP90 proteins are highly conserved molecular chaperones that have key roles in signaltransduction, protein folding, protein degradation, and morphologic evolution. HSP90 proteinsnormally associate with other cochaperones and play important roles in folding newly synthesizedproteins or stabilizing and refolding denatured proteins after stress. There are 2 major cytosolicHSP90 proteins, HSP90AA1 (MIM 140571), an inducible form, and HSP90AB1, a constitutive form. OtherHSP90 proteins are found in endoplasmic reticulum (HSP90B1; MIM 191175) and mitochondria (TRAP1;MIM 606219) (Chen et al., 2005 [PubMed 16269234]).[supplied by OMIM] UniProtKB/Swiss-Prot: HS90B_HUMAN, P08238 Function : Molecular chaperone. Has ATPase activity
Gene Wiki entry for HSP90AB1
Genomic Location for HSP90AB1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the HSP90AB1 gene Entrez Gene cytogenetic band: 6p12 Ensembl cytogenetic band: 6p21.1 HGNC cytogenetic band: 6p12 HSP90AB1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure
GeneLoc location for GC06P044324:
(about GC identifiers )
Start:
44,322,802 bp from pter
End:
44,329,598 bp from pter
Size:
6,797 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000006.10 NT_007592.14 Proteins for HSP90AB1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: HS90B_HUMAN, P08238 (See
protein sequence )Recommended Name: Heat shock protein HSP 90-beta Size : 724 amino acids; 83264 Da
Subunit : Homodimer. Interacts with TP53/p53 (By similarity). Interacts with UNC45A. Binding toUNC45A involves 2 UNC45A monomers per HSP90AB1 dimer
Subcellular location : Cytoplasm. Melanosome. Note=Identified by mass spectrometry in melanosomefractions from stage I to stage IV
Sequence caution : Sequence=CAB66478.1; Type=Frameshift; Positions=709;
PDB structure from and Proteopedia : 1QZ2 (3D)
 1UYM (3D)
 
Secondary accessions : Q5T9W7 Q9NQW0 Q9NTK6
Post-translational modifications:
Phosphorylated upon DNA damage, probably by ATM or ATR1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins: NP_031381.2 ENSEMBL proteins: ENSP00000360709 ENSP00000325875 ENSP00000360609 ENSP00000360620 ENSP00000360611 ENSP00000360617 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: HSP90AB1 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for HSP90AB1: Assays for HSP90AB1:
Protein
Domains/ Families for HSP90AB1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P08238 ProtoNet protein and cluster: P08238
2 Blocks protein families : IPB001404 Heat shock protein Hsp90 IPB003594 ATP-binding region UniProtKB/Swiss-Prot: HS90B_HUMAN, P08238 Similarity : Belongs to the heat shock protein 90 family
Gene Function for HSP90AB1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_007355 Applied Biosystems Silencer ® siRNAs for HSP90AB1 Sigma-Aldrich siRNA and siRNA Panels for HSP90AB1 Sigma-Aldrich shRNA Panels and shRNA for HSP90AB1 Explore Sigma-Aldrich super-pooled esiRNAs               OriGene GFP tagged cDNA clone in CMV expression vector: NM_007355                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_007355                                  untagged cDNA clone in CMV expression vector: NM_007355  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_007355 UniProtKB/Swiss-Prot: HS90B_HUMAN, P08238 Function : Molecular chaperone. Has ATPase activity
4 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Hsp90ab1) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for HSP90AB1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/11 Sigma-Aldrich "Your Favorite Gene" Pathways for HSP90AB1 (Your Favorite Gene powered by Ingenuity) (see all 11
) 5/370 Interacting proteins for HSP90AB1 (P08238 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 370
)About this table 5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
):
GO ID Qualified GO term Evidence PubMed IDs GO:0006457 protein folding
IEA -- GO:0006986 response to unfolded protein
NAS 2768249 GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process
IMP 16280321 GO:0045429 positive regulation of nitric oxide biosynthetic process
ISS -- GO:0060334 regulation of interferon-gamma-mediated signaling pathway
IMP 16280321
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Drugs & Compounds for HSP90AB1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for HSP90AB1
Compounds for HSP90AB1 available from Tocris Bioscience Compound Action
CAS
number CCT 018159 Hsp90 inhibitor [171009-07-7] 17-AAG Selective Hsp90 inhibitor [75747-14-7] Macbecin I Hsp90 inhibitor [73341-72-7] Gedunin Hsp90 inhibitor; anticancer and antimalarial activity [2753-30-2] Radicicol Hsp90 inhibitor. Antifungal antibiotic [12772-57-5]
About this table 7 Novoseek chemical compound relationships for HSP90AB1 gene
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Transcripts for HSP90AB1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_007355 Sigma-Aldrich siRNA and siRNA Panels for HSP90AB1 Sigma-Aldrich shRNA Panels and shRNA for HSP90AB1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_007355
REFSEQ mRNAs for HSP90AB1 gene: NM_007355.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_007355
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_007355                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_007355                                  untagged cDNA clone in CMV expression vector: NM_007355  
Additional cDNA sequence: AF275719.1 AK025370.1 AK130494.1 AK290734.1 AK294643.1 AK297367.1 AK312255.1 AL136543.1 AY359878.1 BC004928.1 BC007327.2 BC009206.2 BC012807.2 BC014485.1 BC016753.2 BC068474.1 BX649079.1 CR605481.1 CR612013.1 CR613983.1 CR618851.1 D28342.1 M16660.1
24/167 DOTS entries (see all 167
): DT.95313805 DT.92408441 DT.92470997 DT.121336150 DT.100725038 DT.92326561 DT.100725015 DT.91902593 DT.92411584 DT.121336080 DT.95139876 DT.121336390 DT.121336180 DT.100652561 DT.121336358 DT.100725069 DT.121336274 DT.100804704 DT.100725071 DT.97869713 DT.91657672 DT.100724999 DT.100725012 DT.121336112
24/219 AceView cDNA sequences (see all 219
):AW963867 T51115 AA487401 AA487283 AA075646 T59827 BI494859 AA075645 BM014574 H50320 T59996 AA101959 T51023 T59691 CA398011 AI094312 AI874069 AA211753 AA284704 AW675427 AA287134 AW439011 BM875458 BQ316345
highest scoring ESTs for HSP90AB1 :M16660 AA034511 AA035563 AA039819 AA053002 AA074189 AA075646 AA076380 AA099618 AA126226
Unigene Cluster for HSP90AB1: Heat shock protein 90kDa alpha (cytosolic), class B member 1 Hs.509736 [show with all ESTs ] Unigene Representative Sequence: AY359878 GeneLoc Exon Structure 5/12 Alternative Splicing Database (ASD) splice patterns (SP) for HSP90AB1 (see all 12
) ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4a · 4b · 4c ^ 5a · 5b ^ 6a · 6b · 6c ^ 7a · 7b ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16a · SP1 :                                       -               SP2 :                                       -               SP3 :                                       -               SP4 :         -           -                                   SP5 :                                 -   -                  
About this scheme ECgene alternative splicing isoforms for HSP90AB1 6 Ensembl transcripts including schematic representations : ENST00000371646
ENST00000353801
ENST00000371554
ENST00000371565
ENST00000371556
ENST00000371562
Expression for HSP90AB1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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HSP90AB1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for HSP90AB1 1 / 2 / 3
7 probe-sets matching HSP90AB1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.509736
Orthologs for HSP90AB1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for HSP90AB1 gene from 5/24 species (see all 24
)
About this table Species with no ortholog for HSP90AB1 ENSEMBL Gene Tree for HSP90AB1 Paralogs for HSP90AB1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for HSP90AB1 gene HSP90AB3P 2 HSP90AA5P 2 HSP90AB2P 2 HSP90AA6P 2 HSP90AA4P 2 HSP90AB4P 2 HSP90AA2 2 Pseudogenes 4 related pseudogenes
SNPs/Variants for HSP90AB1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for HSP90AB1 (up to first 250kb)
Disorders & Mutations for HSP90AB1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 140572 10 Novoseek disease relationships for HSP90AB1 gene
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
shock
77.61
50
1988296 (3), 14532285 (3), 8991187 (2), 12569668 (2) (see all 37 )
laryngeal carcinoma
33.90
3
11717891 (2), 10920983 (1)
laryngeal cancer
28.97
1
10920983 (1)
lupus erythematosus systemic
24.91
2
11771959 (1), 8216691 (1)
bronchitis chronic
23.39
1
11775547 (1)
breast cancer
8.52
4
10638971 (1), 10376793 (1), 9364934 (1), 1312348 (1)
melanoma
0.00
1
7954339 (1)
cancer
0.00
8
11721455 (1), 18497978 (1), 8878452 (1), 12369295 (1)
carcinoma
0.00
4
18497978 (1), 8878452 (1)
asthma
0.00
1
11775547 (1)
About this table Human Genome Epidemiology Navigator: HSP90AB1 (1 document)
Medical News for HSP90AB1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for HSP90AB1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/148 PubMed articles for HSP90AB1 gene (see all 148
): Nucleotide sequence and regulation of a human 90-kDa heat shock protein gene. (PubMed id 2768249) 2, 3, 4 Rebbe N.F.... Hickman S. (1989) The HSP90 family of genes in the human genome: insights into their divergence and evolution. (PubMed id 16269234) 1, 2, 3 Chen B....Monteiro A. (2005) A cosmid clone at the D6S182 locus on human chromosome 6p12 contains the 90-kDa heat shock protein beta gene (HSP90 beta). (PubMed id 8180474) 1, 3, 4 Takahashi I.... Hashimoto K. (1994) Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. (PubMed id 16916647) 3, 4 Kim S.C.... Zhao Y. (2006) Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. (PubMed id 17081065) 3, 4 Chi A....Hunt D.F. (2006) A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243) 3, 4 Beausoleil S.A.... Gygi S.P. (2006) Phosphoproteome analysis of the human mitotic spindle. (PubMed id 16565220) 3, 4 Nousiainen M.... Koerner R. (2006) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 3, 4 Olsen J.V....Mann M. (2006) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455) 3, 4 Rush J.... Comb M.J. (2005) Phosphoproteomic analysis of synaptosomes from human cerebral cortex. (PubMed id 15822905) 3, 4 DeGiorgis J.A.... Dosemeci A. (2005)
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Genome Databases showing HSP90AB1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing HSP90AB1
(According to HUGE )
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--
Specialized Databases showing HSP90AB1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for HSP90AB1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for HSP90AB1:
Antibodies & Assays for HSP90AB1   (HSP90beta)
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Aliases for HSP90AB1
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009