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Aliases & Descriptions for HSPB1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| CMT2F 2, 5 | | DKFZp586P1322 2 | | HMN2B 2, 5 | | HS.76067 2 | | HSP27 1, 2, 3, 5 | | HSP28 1, 2, 3 | | Hsp25 1, 2 | | HspB1 3 | | OTTHUMP00000024846 2 | | SRP27 2, 3 |
| | | Descriptions |
|---|
| 28 kDa heat shock protein 3 | | Estrogen-regulated 24 kDa protein 2, 3 | | HSP 27 3 | | Heat shock 27 kDa protein 3 | | Stress-responsive protein 27 2, 3 | | heat shock 27kD protein 1 1, 2 | | heat shock 27kDa protein 1 2 | | heat shock protein beta-1 2 |
|
| | Search outside databases for aliases for HSPB1 genePrevious GC identifers: GC07P074467 GC07P075530 GC07P075544 GC07P075576 |
Summaries for HSPB1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for HSPB1: The protein encoded by this gene is induced by environmental stress and developmental changes. The encoded protein is involved in stress resistance and actin organization and translocates from the cytoplasm to the nucleus upon stress induction. Defects in this gene are a cause of Charcot-Marie-Tooth disease type 2F (CMT2F) and distal hereditary motor neuropathy (dHMN). [provided by RefSeq] UniProtKB/Swiss-Prot: HSPB1_HUMAN, P04792Function: Involved in stress resistance and actin organizationGene Wiki entry for HSPB1 (Hsp27) |
Genomic Location for HSPB1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the HSPB1 gene 
Entrez Gene cytogenetic band: 7q11.23 Ensembl cytogenetic band: 7q11.23 HGNC cytogenetic band: 7qHSPB1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 7 GeneLoc Exon Structure GeneLoc location for GC07P075769:
(about GC identifiers)
Start:
|
75,769,859 bp from pter |
End:
|
75,771,548 bp from pter |
Size:
|
1,690 bases |
Orientation:
|
plus strand |
1 alternative location:
| Chr7+,CRA_TCAG 75,264,987-75,266,676 |
RefSeq DNA sequence:- NC_000007.12 NT_007933.14 NT_079595.2
| Proteins for HSPB1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: HSPB1_HUMAN, P04792 (See
protein sequence)Recommended Name: Heat shock protein beta-1 Size: 205 amino acids; 22783 Da
Subunit: Interacts with TGFB1I1 (By similarity). Associates with alpha- and beta-tubulin, microtubules and CRYAB. Interacts with HSPB8 and HSPBAP1
Subcellular location: Cytoplasm. Nucleus. Spindle. Note=Cytoplasmic in interphase cells. Colocalizes with mitotic spindles in mitotic cells. Translocates to the nucleus during heat shock
Sequence caution: Sequence=AAA62175.1; Type=Frameshift; Positions=194; Sequence=AAB20722.1; Type=Frameshift; Positions=194; Sequence=CAA34498.1; Type=Frameshift; Positions=194;
Secondary accessions: Q6FI47 Q96C20 Q96EI7 Q9UC31 Q9UC34 Q9UC35 Q9UC36Post-translational modifications:
Phosphorylated in MCF-7 cells on exposure to protein kinase C activators and heat shock1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001531.1
ENSEMBL proteins: ENSP00000248553
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: HSPB1 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for HSPB1: Assays for HSPB1: | Protein
Domains/ Families for HSPB1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P04792
ProtoNet protein and cluster: P04792 1 Blocks protein family: IPB002068 Heat shock protein Hsp20
UniProtKB/Swiss-Prot: HSPB1_HUMAN, P04792Similarity: Belongs to the small heat shock protein (HSP20) family | Gene Function for HSPB1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001540
Applied Biosystems Silencer® siRNAs for HSPB1
Sigma-Aldrich siRNA for HSPB1  Sigma-Aldrich shRNA Panels and shRNA for HSPB1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001540                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001540                                  untagged cDNA clone in CMV expression vector: NM_001540 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001540
UniProtKB/Swiss-Prot: HSPB1_HUMAN, P04792Function: Involved in stress resistance and actin organizationInduction: Expressed in response to environmental stresses such as heat shock, or estrogen stimulation in MCF-7 cellsGenatlas biochemistry entry for HSPB1:heat shock protein 1,estrogen receptor related1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Hspb1):
1 Gene Ontology (GO) molecular function term (links to tree view): About this table | Pathways & Interactions for HSPB1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/6 Sigma-Aldrich "Your Favorite Gene" Pathways for HSPB1 (Your Favorite Gene powered by Ingenuity) (see all 6
) 
Gene Network CentralTM Interacting Genes and Proteins Network for HSPB1 
5/50 Interacting proteins for HSPB1 (ENSP000002485533 P047921, 2) via UniProtKB, MINT, and/or STRING (see all 50
)About this table
5 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for HSPB1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for HSPB1 10/52 Novoseek chemical compound relationships for HSPB1 gene (see all 52
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| 17-(allylamino)-17-demethoxygeldanamycin |
53.82 |
6 |
19383903 (3), 17173546 (2) |
| sp 600125 |
46.31 |
8 |
12943527 (3), 15062846 (2), 18407296 (1), 16876988 (1) (see all 5) |
| pd 98,059 |
43.89 |
16 |
11909638 (3), 11483406 (2), 10572244 (2), 11034403 (2) (see all 10) |
| okadaic acid |
38.56 |
12 |
8690728 (2), 8380591 (1), 18241680 (1), 7510704 (1) (see all 9) |
| 12-o-tetradecanoylphorbol 13-acetate |
35.04 |
24 |
10572244 (3), 17673262 (3), 10839933 (2), 9332492 (1) (see all 8) |
| dbc-amp |
32.70 |
9 |
11701442 (2), 7541446 (1), 12694807 (1), 15848222 (1) (see all 7) |
| cdcl2 |
32.53 |
7 |
11525238 (2), 11497330 (2), 10379001 (1) |
| manganese superoxide |
30.37 |
4 |
12385642 (2), 17593366 (1), 17884789 (1) |
| progesterone |
30.08 |
28 |
8142264 (4), 1851492 (2), 1562530 (2), 9219918 (2) (see all 16) |
| ecdysone |
29.33 |
2 |
1846802 (1), 12175493 (1) |
About this table
|
Transcripts for HSPB1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001540
Sigma-Aldrich siRNA for HSPB1  Sigma-Aldrich shRNA Panels and shRNA for HSPB1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001540 REFSEQ mRNAs for HSPB1 gene: NM_001540.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001540               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001540                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001540                                  untagged cDNA clone in CMV expression vector: NM_001540  Additional cDNA sequence: AB020027.1 AF086135.1 AK296890.1 AK311446.1 AK311894.1 AL050380.1 BC000510.2 BC012292.1 BC012768.2 BC014920.1 BC073768.1 BT019888.1 CR407614.1 CR536489.1 CR591310.1 CR602417.1 CR603713.1 CR605148.1 CR606208.1 CR607252.1 CR608836.1 CR609210.1 CR611496.1 S74571.1 U90906.1 X16477.1 X54079.1 24/41 DOTS entries (see all 41
): DT.91648006 DT.97869739 DT.101986742 DT.95186317 DT.100738944 DT.100886895 DT.100886894 DT.95365380 DT.100886884 DT.80100707 DT.91870325 DT.100886876 DT.95365364 DT.100886881 DT.100886879 DT.86996824 DT.100886873 DT.100886891 DT.121077547 DT.87009731 DT.95365341 DT.100660034 DT.100886874 DT.100886882 24/2126 AceView cDNA sequences (see all 2126
):BI819052 BM827986 BQ651753 BM887777 BM919872 BM912150 CR609210 BU557899 CD675553 BU728236 BE858184 AI149133 BM909888 BU189491 BM826205 BG752568 BM833965 BM672677 AU134929 AA302272 BM787855 AL541694 BM747288 CD674863
highest scoring ESTs for HSPB1:AA022819 AA033557 AA040623 AA042877 AA044229 AA044762 AA045029 AA045039 AA045787 AA052937 Unigene Cluster for HSPB1: Heat shock 27kDa protein 1 Hs.520973 [show with all ESTs]Unigene Representative Sequence: BM454532
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for HSPB1
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3 | ^ | 4a | · | 4b | · | 4c | |
| SP1: | |   | - |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for HSPB1
1 Ensembl transcript including schematic representation: ENST00000248553
|
Expression for HSPB1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| HSPB1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for HSPB1
1 / 2 / 3 4 probe-sets matching HSPB1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CCCAAGCTAG
SOURCE GeneReport for Unigene cluster: Hs.520973
Expression variation in blood from EXPOLDB for HSPB1 UniProtKB/Swiss-Prot: HSPB1_HUMAN, P04792Tissue specificity: Detected in all tissues tested: skeletal muscle, heart, aorta, large intestine, small intestine, stomach, esophagus, bladder, adrenal gland, thyroid, pancreas, testis, adipose tissue, kidney, liver, spleen, cerebral cortex, blood serum and cerebrospinal fluid. Highest levels are found in the heart and in tissues composed of striated and smooth muscle |
Orthologs for HSPB1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for HSPB1 gene from 5/10 species (see all 10
)
About this table Species with no ortholog for HSPB1
ENSEMBL Gene Tree for HSPB1 | Paralogs for HSPB1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for HSPB1 gene
- CRYAA2 CRYAB2 HSPB62
Pseudogenes
- 1 related pseudogene
|
SNPs/Variants for HSPB1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for HSPB1 (up to first 250kb)
|
Disorders & Mutations for HSPB1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602195 disorders: 608634 606595 UniProtKB/Swiss-Prot: HSPB1_HUMAN, P04792
Defects in HSPB1 are the cause of Charcot-Marie-Tooth disease type 2F (CMT2F) [MIM:606595]. CMT2F is a form of Charcot-Marie-Tooth disease, the most common inherited disorder of the peripheral nervous system. Charcot-Marie-Tooth disease is classified in two main groups on the basis of electrophysiologic properties and histopathology: primary peripheral demyelinating neuropathy or CMT1, and primary peripheral axonal neuropathy or CMT2. Neuropathies of the CMT2 group are characterized by signs of axonal regeneration in the absence of obvious myelin alterations, normal or slightly reduced nerve conduction velocities, and progressive distal muscle weakness and atrophy. Nerve conduction velocities are normal or slightly reduced. CMT2F onset is between 15 and 25 years with muscle weakness and atrophy usually beginning in feet and legs (peroneal distribution). Upper limb involvement occurs later. CMT2F inheritance is autosomal dominant Defects in HSPB1 are a cause of distal hereditary motor neuronopathy type 2B (HMN2B) [MIM:608634]. Distal hereditary motor neuronopathies constitute a heterogeneous group of neuromuscular disorders caused by selective impairment of motor neurons in the anterior horn of the spinal cord, without sensory deficit in the posterior horn. The overall clinical picture consists of a classical distal muscular atrophy syndrome in the legs without clinical sensory loss. The disease starts with weakness and wasting of distal muscles of the anterior tibial and peroneal compartments of the legs. Later on, weakness and atrophy may expand to the proximal muscles of the lower limbs and/or to the distal upper limbs10/95 Novoseek disease relationships for HSPB1 gene (see all 95
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| shock |
91.56 |
613 |
16840785 (4), 1730670 (4), 12423255 (4), 2037626 (4) (see all 99) |
| alexanders disease |
57.44 |
5 |
8256860 (2), 8393618 (2), 7541446 (1) |
| charcot-marie-tooth disease |
56.08 |
5 |
17881652 (2), 18587268 (1), 16215937 (1), 16155736 (1) |
| tumors |
45.47 |
212 |
9179613 (6), 12820652 (6), 16234246 (5), 8590455 (5) (see all 92) |
| breast cancer |
45.27 |
102 |
15833836 (5), 8402609 (4), 19080259 (4), 9307847 (3) (see all 46) |
| ehrlich ascites tumor |
37.04 |
4 |
1930221 (2), 8647651 (1), 9665826 (1) |
| carcinoma squamous cell |
36.67 |
35 |
11836604 (3), 9210326 (2), 14702179 (2), 16619543 (2) (see all 22) |
| cancer |
32.54 |
34 |
19214136 (3), 9815962 (2), 17106261 (2), 11156417 (2) (see all 21) |
| metastasis |
30.50 |
31 |
16696328 (2), 9568646 (2), 11836604 (2), 19166925 (1) (see all 16) |
| breast carcinoma |
30.17 |
13 |
1988702 (4), 14715258 (2), 9568111 (1), 7579511 (1) (see all 7) |
About this table
GeneTests: HSPB1 Charcot-Marie-Tooth Neuropathy Type 2 Human Gene Mutation Database: HSPB1 Genetic Association Database: HSPB1 Human Genome Epidemiology Navigator: HSPB1 (2 documents)
|
Medical News for HSPB1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for HSPB1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/733 PubMed articles for HSPB1 gene (see all 733
):- cDNA sequence of a human heat shock protein HSP27. (PubMed id 2243808)2, 3, 4 Carper S.W.... Storm F.K. (1990)
- Small heat shock protein 27 (HSP27) associates with tubulin/microtubules in HeLa cells. (PubMed id 10777697)1, 3, 4 Hino M.... Hosoya H. (2000)
- [Mutation analysis of small heat shock protein 27 gene in Chinese patients with Charcot-Marie-Tooth disease] (PubMed id 16215937)1, 3, 6 Liu X.M....Jiang H. (2005)
- Human HSP27 is phosphorylated at serines 78 and 82 by heat shock and mitogen-activated kinases that recognize the same amino acid motif as S6 kinase II. (PubMed id 1730670)1, 3, 4 Landry J....Anderson C.W. (1992)
- Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. (PubMed id 16916647)3, 4 Kim S.C.... Zhao Y. (2006)
- A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)3, 4 Beausoleil S.A.... Gygi S.P. (2006)
- Phosphoproteome analysis of the human mitotic spindle. (PubMed id 16565220)3, 4 Nousiainen M.... Koerner R. (2006)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- Heat shock protein 27 is associated with freedom from graft vasculopathy after human cardiac transplantation. (PubMed id 15976317)3, 4 De Souza A.I....Rose M.L. (2005)
- Global phosphoproteome analysis on human HepG2 hepatocytes using reversed-phase diagonal LC. (PubMed id 16097034)3, 4 Gevaert K.... Vandekerckhove J. (2005)
|
Search for HSPB1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing HSPB1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing HSPB1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing HSPB1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| Name | Description |
| ATLAS Chromosomes in Cancer entry for HSPB1 | Genetics and Cytogenetics in Oncology and Haematology | | Inherited peripheral neuropathies mutation db | http://www.molgen.ua.ac.be/CMTMutations/ | | GeneReviews | http://www.genetests.org/query?gene=HSPB1 | | NIEHS SNPs | http://egp.gs.washington.edu/data/hspb1/ |
|
| | | About This Section
| --
| Services for HSPB1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for HSPB1:

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Incremental update: 13 Oct 2009
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