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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HSPA5 Gene

protein-coding   GIFtS: 69
GCID: GC09M127997

heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)

(Previous names: heat shock 70kD protein 5 (glucose-regulated protein, 78kD)...)
(Previous symbol: GRP78)
 Explore 113 diseases affiliated with
HSPA5 via our new
 Human Malady Compendium 
Biological research products
for HSPA5
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Heat Shock 70kDa Protein 5 (Glucose-Regulated Protein, 78kDa)1 2     78 KDa Glucose-Regulated Protein2
GRP781 2 3 5     BIP2
BiP1 3     MIF22
Endoplasmic Reticulum Lumenal Ca(2+)-Binding Protein Grp782 3     GRP-783
Immunoglobulin Heavy Chain-Binding Protein2 3     Heat Shock 70 KDa Protein 53
Heat Shock 70kD Protein 5 (Glucose-Regulated Protein, 78kD)1     

External Ids:    HGNC: 52381   Entrez Gene: 33092   Ensembl: ENSG000000445747   OMIM: 1381205   UniProtKB: P110213   

Export aliases for HSPA5 gene to outside databases

Previous GC identifers: GC09M119111 GC09M119643 GC09M121450 GC09M123373 GC09M125076 GC09M127036 GC09M097610


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HSPA5:
The protein encoded by this gene is a member of the heat shock protein 70 (HSP70) family. It is localized in the lumen
of the endoplasmic reticulum (ER), and is involved in the folding and assembly of proteins in the ER. As this protein
interacts with many ER proteins, it may play a key role in monitoring protein transport through the cell.(provided by
RefSeq, Sep 2010)

UniProtKB/Swiss-Prot: GRP78_HUMAN, P11021
Function: Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER

Gene Wiki entry for HSPA5 (Binding immunoglobulin protein)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000009.11  NC_018920.1  NT_008470.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HSPA5 gene promoter:
         CREB   AP-1   ATF-2   deltaCREB   c-Myb   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): HSPA5 promoter sequence
   Search SABiosciences Chromatin IP Primers for HSPA5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HSPA5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 9q33.3   Ensembl cytogenetic band:  9q33.3   HGNC cytogenetic band: 9q33.3

HSPA5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HSPA5 gene location

GeneLoc information about chromosome 9         GeneLoc Exon Structure

GeneLoc location for GC09M127997:  view genomic region     (about GC identifiers)

Start:
127,997,127 bp from pter      End:
128,003,661 bp from pter
Size:
6,535 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: GRP78_HUMAN, P11021 (See protein sequence)
Recommended Name: 78 kDa glucose-regulated protein precursor  
Size: 654 amino acids; 72333 Da
Subunit: Interacts with DNAJC1 (via J domain) (By similarity). Component of an EIF2 complex at least composed of
CELF1/CUGBP1, CALR, CALR3, EIF2S1, EIF2S2, HSP90B1 and HSPA5. Part of a large chaperone multiprotein complex
comprising DNAJB11, HSP90B1, HSPA5, HYOU, PDIA2, PDIA4, PDIA6, PPIB, SDF2L1, UGT1A1 and very small amounts of ERP29,
but not, or at very low levels, CALR nor CANX. Interacts with TMEM132A and TRIM21. May form a complex with ERLEC1,
OS9, SEL1L and SYVN1. Interacts with MX1 (By similarity)
Subcellular location: Endoplasmic reticulum lumen. Melanosome. Cytoplasm (By similarity). Note=Identified by mass
spectrometry in melanosome fractions from stage I to stage IV
5 PDB 3D structures from and Proteopedia for HSPA5:
3IUC (3D)        3LDL (3D)        3LDN (3D)        3LDO (3D)        3LDP (3D)    
Secondary accessions: B0QZ61 Q2EF78 Q9NPF1 Q9UK02

Explore the universe of human proteins at neXtProt for HSPA5: NX_P11021

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P11021

  • HSPA5 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_005338.1  
    ENSEMBL proteins: 
     ENSP00000324173  
    Reactome Protein details: P11021
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    Uscn Proteins for HSPA5

    Gene Ontology (GO): 5/13 cellular component terms (GO ID links to tree view) (see all 13):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IMP11943137
    GO:0005783endoplasmic reticulum TAS16130169
    GO:0005788endoplasmic reticulum lumen TAS--
    GO:0005789endoplasmic reticulum membrane TAS--
    GO:0005793endoplasmic reticulum-Golgi intermediate compartment IDA15308636


    HSPA5 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HSPA5 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR018181 Heat_shock_70_CS
     IPR013126 Hsp_70_fam

    Graphical View of Domain Structure for InterPro Entry P11021

    ProtoNet protein and cluster: P11021

    1 Blocks protein family: IPB001023 Heat shock protein Hsp70

    UniProtKB/Swiss-Prot: GRP78_HUMAN, P11021
    Similarity: Belongs to the heat shock protein 70 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: GRP78_HUMAN, P11021
    Function: Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER

         Genatlas biochemistry entry for HSPA5:
    glucose regulated protein (78kDa),HSP70 homolog,in the endoplasmic reticulum,subunit of PPP1CC2

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    Gene Ontology (GO): 5/12 molecular function terms (GO ID links to tree view) (see all 12):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005509calcium ion binding TAS16130169
    GO:0005515protein binding IPI19632185
    GO:0005524ATP binding IEA--
    GO:0016887ATPase activity ISS--
    GO:0019904protein domain specific binding IPI12411443


    HSPA5 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for HSPA5:
     Decreased G3BP1 protein expres  Decreased Wnt reporter activit 

    Animal Models:
         Mouse knock-out Hspa5tm1.1Alee for HSPA5
         15 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Hspa5):
     cardiovascular system  cellular  craniofacial  digestive/alimentary  embryogenesis 
     growth/size  homeostasis/metabolism  integument  mortality/aging  nervous system 
     normal  renal/urinary system  reproductive system  respiratory system  tumorigenesis 

    HSPA5 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/20 super-pathways (see all 20About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)
    Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)1.00
    Development_Glucocorticoid receptor signaling0.27
    CFTR folding and maturation (norm and CF)0.37
    Development Glucocorticoid receptor signaling0.27
    2Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway1.00
    Parkin-Ubiquitin Proteasomal System pathway0.93
    Proteolysis_Role of Parkin in the Ubiquitin-Proteasomal Pathway0.93
    3Platelet activation, signaling and aggregation
    Platelet activation, signaling and aggregation1.00
    Hemostasis0.43
    4Immune System
    Immune System1.00
    Adaptive Immune System0.59
    5Platelet degranulation
    Platelet degranulation 1.00
    Response to elevated platelet cytosolic Ca2+0.94

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    3 EMD Millipore Pathways for HSPA5
        Development Glucocorticoid receptor signaling
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Proteolysis Putative ubiquitin pathway


    1 Cell Signaling Technology (CST) Pathway for HSPA5
        Translational Control

    5/6 GeneGo (Thomson Reuters) Pathways for HSPA5 (see all 6)
        Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Regulation of degradation of deltaF508 CFTR in CF
    CFTR folding and maturation (norm and CF)
    Proteolysis Putative ubiquitin pathway

    2 BioSystems Pathways for HSPA5 
        MAPK signaling pathway
    Parkin-Ubiquitin Proteasomal System pathway

    5/15        Reactome Pathways for HSPA5 (see all 15)
        Expression of BIP (78 kDa Glucose-regulated protein, GRP78, HSPA5)
    Hemostasis
    Antigen Presentation: Folding, assembly and peptide loading of class I MHC
    Adaptive Immune System
    Response to elevated platelet cytosolic Ca2+


    4         Kegg Pathways  (Kegg details for HSPA5):
        Protein export
    Protein processing in endoplasmic reticulum
    Antigen processing and presentation
    Prion diseases


    HSPA5 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HSPA5

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/1195 Interacting proteins for HSPA5 (P110211, 2, 3 ENSP000003241734) via UniProtKB, MINT, STRING, and/or I2D (see all 1195)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=1 
    HIST1H4BP628053I2D: score=1 
    HIST1H4CP628053I2D: score=1 
    HIST1H4DP628053I2D: score=1 
    HIST1H4EP628053I2D: score=1 
    About this table

    Gene Ontology (GO): 5/17 biological process terms (GO ID links to tree view) (see all 17):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002576platelet degranulation TAS--
    GO:0006200ATP catabolic process ISS--
    GO:0006983ER overload response IEA--
    GO:0006987activation of signaling protein activity involved in unfolded protein response TAS--
    GO:0007596blood coagulation TAS--


    HSPA5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    HSPA5 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for HSPA5

    1 DrugBank Compound for HSPA5    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Antihemophilic FactorAHF (see all 3)--targetchaperone9607108 17139284 17016423

    10/98 Novoseek chemical compound relationships for HSPA5 gene (see all 98)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tunicamycin 87.1 67 10760948 (7), 8454000 (4), 18477628 (3), 18228003 (3) (see all 33)
    trans-4,5-dihydroxy-1,2-dithiane 84.3 4 9268305 (2), 9268304 (1), 16150886 (1)
    thapsigargin 77.5 57 9595551 (6), 1506413 (4), 8844337 (3), 12516782 (3) (see all 32)
    11-deoxy-16,16-dimethyl-pge2 73.3 4 15226156 (4)
    2-deoxyglucose 57.7 26 19766678 (6), 15895530 (1), 17612505 (1), 17941090 (1) (see all 13)
    kar 2 57.4 2 2071610 (1), 9428766 (1)
    azetidine 54.2 5 12076252 (2), 9498488 (2), 8972185 (1)
    6-aminonicotinamide 54.1 11 10198218 (4), 10692493 (3), 7850801 (1)
    calcium 47.2 76 16418174 (7), 9388233 (5), 1649196 (4), 9477774 (4) (see all 36)
    dithiothreitol 47 14 7876163 (2), 2122977 (2), 11796709 (1), 9159886 (1) (see all 10)

    Search CenterWatch for drugs/clinical trials and news about HSPA5 / GRP78 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HSPA5 gene: 
    NM_005347.4  

    Unigene Cluster for HSPA5:

    Heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
    Hs.743241  [show with all ESTs]
    Unigene Representative Sequence: NM_005347
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000324460(uc004bpn.3)

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    Additional cDNA sequence: 

    AF188611.1 AF216292.1 AJ271729.1 AK129617.1 AK293604.1 BC020235.1 X87949.1 

    24/38 DOTS entries (see all 38):

    DT.100735994  DT.100735949  DT.100866457  DT.91778195  DT.97861539  DT.95343265  DT.121196325  DT.121196336 
    DT.97868449  DT.121196285  DT.97853455  DT.121196307  DT.100735971  DT.100736014  DT.121196310  DT.95296188 
    DT.97868439  DT.100034725  DT.121271258  DT.100658122  DT.121196305  DT.91778233  DT.95252068  DT.95295959 

    24/1367 AceView cDNA sequences (see all 1367):

    BU736038 BQ004912 BM827014 BM453295 BP380076 AL043258 AW449037 BQ717770 
    CB106885 BP367119 BX439221 BM353167 AL044593 BM825472 AI926841 BF094889 
    BF923835 CN481072 CB149040 AA160899 BX414039 BM841556 AL040204 AA025918 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HSPA5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TGCATCTGGT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    HSPA5 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Definitive endoderm-like cells (A scalable, suspensi...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See HSPA5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HSPA5

    SOURCE GeneReport for Unigene cluster: Hs.743241
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              Heat Shock Proteins & Chaperones in human mouse rat
              cAMP / Ca2+ Signaling PathwayFinder in human mouse rat
              Neurotoxicity in human mouse rat
              Cellular Stress Responses in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for HSPA5 gene from 9/37 species (see all 37)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves HSPA51 heat shock 70kDa protein 5 (glucose-regulated protein, more 84.55(n)
    97.36(a)
      396487  NM_205491.1  NP_990822.1 
    lizard
    (Anolis carolinensis)
    Reptilia HSPA56
    --
    --
    93(a)
    53(a)
    1 ↔ 1
    possible ortholog
    AAWZ02037731(6139-11086)
    GL343668.1(269397-271328)
    African clawed frog
    (Xenopus laevis)
    Amphibia hspa5-prov2 heat shock 70kDa protein 5 (glucose-regulated protein, more 79.8(n)    BC041200.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.261162 Danio rerio cDNA clone MGC55994 IMAGE3819692, complete more 78.19(n)    BC063946.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Hsc70-31 Heat shock protein cognate 3 72.79(n)
    81.01(a)
      32133  NM_078577.2  NP_511132.2 
    worm
    (Caenorhabditis elegans)
    Secernentea hsp-31 Protein HSP-3 69.94(n)
    78.03(a)
      180880  NM_076618.4  NP_509019.1 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes KAR2(YJL034W)4
    KAR21
    ATPase involved in protein import into the ER, also more4
    Kar2p1
    64.33(n)1
    68.26(a)1
      10(381327-383375)4
    8534181, 4  NP_012500.31  NP_012500.14 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons BIP11 Luminal-binding protein 1 64.48(n)
    70.27(a)
      832950  NM_122737.3  NP_198206.1 
    rice
    (Oryza sativa)
    Liliopsida Os02g01159001 hypothetical protein 65.67(n)
    70.53(a)
      4328075  NM_001052210.1  NP_001045675.1 


    ENSEMBL Gene Tree for HSPA5 (if available)
    TreeFam Gene Tree for HSPA5 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for HSPA5 gene
    HSPA82  HSPA1L2  HSPA1B2  HSPA62  HSPA142  HSPA132  HSPA1A2  
    14 SIMAP similar genes for HSPA5 using alignment to 1 protein entry:     GRP78_HUMAN:
    HSPA1L    HSPA2    HSPA6    HSPA1A    HSPA7    HSPA1B
    HSPA8    LOC401308    HSPA9    HSPA14    HS24/p52    HSPA13
    HSPA4    HSPH1

    HSPA5 for paralogs           About GeneDecksing


    2 Pseudogenes.org Pseudogenes for HSPA5
    PGOHUM00000244679 PGOHUM00000246127


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/192 NCBI SNPs in HSPA5 are shown (see all 192    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 9 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs4214291,2
    C,F,--127996712(-) CCTGAG/ATATCT 4 -- ds5001 int17Minor allele frequency- A:0.07NS NA 192
    rs40758561,2
    C,F,--127996778(-) atggtG/Atgatc 4 -- ds5001 int18Minor allele frequency- A:0.04NA NS CSA 190
    rs1858069121,2
    --127996833(+) AAAAAA/TAAATA 4 -- ds5001 int10--------
    rs2003076071,2
    --127996834(+) AAAAA-/TAATAT 4 -- int1 ds50010--------
    rs20053421,2
    C,--127996835(-) TATATA/TTTTTT 4 -- ds5001 int12Minor allele frequency- T:0.00NA 4
    rs74689161,2
    C,--127996837(+) AAAAAT/AATATA 4 -- int1 ds50011Minor allele frequency- A:0.00NA 2
    rs586129091,2
    --127996849(+) ATATAC/TACATA 4 -- ds5001 int10--------
    rs2017138011,2
    --127996886(+) ATAGT-/ATAC  
            
    ATATT
    4 -- int1 ds50010--------
    rs2012734551,2
    --127996910(+) ATATA-/TGTATA 4 -- ds5001 int10--------
    rs1995785911,2
    --127996913(+) TATGT-/ATAC  
            
    ATATT
    4 -- int1 ds50010--------

    HapMap Linkage Disequilibrium report for HSPA5 (127997127 - 128003661 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for HSPA5: --
    Human Gene Mutation Database (HGMD): HSPA5

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HSPA5 for disorders           About GeneDecksing

    OMIM gene information: 138120    OMIM disorders: --

    UniProtKB/Swiss-Prot: GRP78_HUMAN, P11021
  • Note=Autoantigen in rheumatoid arthritis

  • 20/113 diseases for HSPA5 (see all 113):    About MalaCards
    factor v and factor viii    alpha 1-antitrypsin deficiency    spinocerebellar ataxia type 17    retinol binding protein
    non-small cell lung carcinoma    amyotrophic lateral sclerosis    myotonic dystrophy type 1    von willebrand's disease
    pre-eclampsia    osteogenesis imperfecta    myotonic dystrophy    transient cerebral ischemia
    spinocerebellar ataxia    lateral sclerosis    japanese encephalitis    olfactory neuroblastoma
    squamous cell carcinoma    b-cell lymphomas    bipolar i disorder    ankylosing spondylitis

    10/54 Novoseek disease relationships for HSPA5 gene (see all 54)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    shock 63.6 74 9806766 (2), 16878978 (2), 9434171 (1), 9482255 (1) (see all 52)
    hepatitis halothane 46.8 1 8415876 (1)
    solid tumor 38.3 5 16595926 (2), 17161515 (1), 8113109 (1)
    cancer 37.7 68 16297569 (6), 16472112 (4), 20097177 (3), 17440054 (2) (see all 36)
    colon cancer 32.4 8 10198218 (3), 20204278 (1), 15778089 (1), 16182273 (1) (see all 6)
    alzheimers disease 29.8 5 10963362 (1), 18781276 (1), 2005999 (1), 10587643 (1) (see all 5)
    tumors 27.4 105 15514946 (7), 18331622 (6), 15380518 (5), 10752676 (3) (see all 49)
    hepatocellular carcinoma 27.2 18 20082722 (8), 20087778 (2), 12713871 (2), 19533686 (1) (see all 7)
    cell damage 26.9 5 11113529 (3), 18813861 (1)
    prostate cancer 24 34 19097122 (4), 17062670 (4), 17640713 (4), 10760948 (3) (see all 14)

    Genetic Association Database (GAD): HSPA5
    Human Genome Epidemiology (HuGE) Navigator: HSPA5 (10 documents)

    Export disorders for HSPA5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HSPA5 gene, integrated from 9 sources (see all 897):
    (articles sorted by number of sources associating them with HSPA5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Human XTP3-B forms an endoplasmic reticulum quality control scaffold with the HRD1-SEL1L ubiquitin ligase complex and BiP. (PubMed id 18502753)1, 2 Hosokawa N.... Nagata K. (2008)
    2. OS-9 and GRP94 deliver mutant alpha1-antitrypsin to the Hrd1-SEL1L ubiquitin ligase complex for ERAD. (PubMed id 18264092)1, 2 Christianson J.C.... Kopito R.R. (2008)
    3. Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. (PubMed id 17081065)1, 2 Chi A....Hunt D.F. (2006)
    4. Functional polymorphisms of HSPA5: possible association with bipolar disorder. (PubMed id 16168956)1, 4 Kakiuchi C....Kato T. (2005)
    5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    6. Proteomic analysis of early melanosomes: identification of novel melanosomal proteins. (PubMed id 12643545)1, 2 Basrur V.... Appella E. (2003)
    7. A subset of chaperones and folding enzymes form multiprotein complexes in endoplasmic reticulum to bind nascent proteins. (PubMed id 12475965)1, 2 Meunier L....Hendershot L.M. (2002)
    8. The human endoplasmic reticulum molecular chaperone BiP is an autoantigen for rheumatoid arthritis and prevents the induction of experimental arthritis. (PubMed id 11160188)1, 2 Corrigall V.M.... Panayi G.S. (2001)
    9. A two-dimensional gel database of human colon carcinoma proteins. (PubMed id 9150948)1, 2 Ji H.... Simpson R.J. (1997)
    10. Two-dimensional electrophoretic analysis of human breast carcinoma proteins: mapping of proteins that bind to the SH3 domain of mixed lineage kinase MLK2. (PubMed id 9150946)1, 2 Rasmussen R.K.... Dorow D.S. (1997)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3309 HGNC: 5238 AceView: HSPA5 Ensembl:ENSG00000044574 euGenes: HUgn3309
    ECgene: HSPA5 Kegg: 3309 H-InvDB: HSPA5

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HSPA5 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for HSPA5 Genetics and Cytogenetics in Oncology and Haematology
    NIEHS-SNPshttp://egp.gs.washington.edu/data/hspa5/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HSPA5 gene:
    Search GeneIP for patents involving HSPA5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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