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Aliases for HSPA4L Gene

Aliases for HSPA4L Gene

  • Heat Shock 70kDa Protein 4-Like 2 3
  • Heat Shock 70-Related Protein APG-1 3 4
  • Osmotic Stress Protein 94 3 4
  • Osp94 3 4
  • Heat Shock 70 KDa Protein 4-Like Protein 3
  • Heat Shock Protein (Hsp110 Family) 3
  • Heat Shock 70 KDa Protein 4L 3
  • APG-1 3
  • HSPH3 3
  • APG1 4

External Ids for HSPA4L Gene

Previous GeneCards Identifiers for HSPA4L Gene

  • GC04P129062
  • GC04P128922
  • GC04P128703
  • GC04P124431

Summaries for HSPA4L Gene

GeneCards Summary for HSPA4L Gene

HSPA4L (Heat Shock 70kDa Protein 4-Like) is a Protein Coding gene. Diseases associated with HSPA4L include endolymphatic hydrops. Among its related pathways are Protein processing in endoplasmic reticulum. An important paralog of this gene is HSPH1.

UniProtKB/Swiss-Prot for HSPA4L Gene

  • Possesses chaperone activity in vitro where it inhibits aggregation of citrate synthase.

Gene Wiki entry for HSPA4L Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSPA4L Gene

Genomics for HSPA4L Gene

Regulatory Elements for HSPA4L Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for HSPA4L Gene

Start:
127,781,821 bp from pter
End:
127,840,733 bp from pter
Size:
58,913 bases
Orientation:
Plus strand

Genomic View for HSPA4L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HSPA4L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSPA4L Gene

Proteins for HSPA4L Gene

  • Protein details for HSPA4L Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O95757-HS74L_HUMAN
    Recommended name:
    Heat shock 70 kDa protein 4L
    Protein Accession:
    O95757
    Secondary Accessions:
    • A2ICT2
    • Q4W5M5
    • Q8IWA2

    Protein attributes for HSPA4L Gene

    Size:
    839 amino acids
    Molecular mass:
    94512 Da
    Quaternary structure:
    • Homodimer.

neXtProt entry for HSPA4L Gene

Proteomics data for HSPA4L Gene at MOPED

Post-translational modifications for HSPA4L Gene

  • Ubiquitination at Lys388
  • Modification sites at PhosphoSitePlus

Other Protein References for HSPA4L Gene

Antibody Products

No data available for DME Specific Peptides for HSPA4L Gene

Domains for HSPA4L Gene

Gene Families for HSPA4L Gene

HGNC:
  • HSP70 :Heat shock proteins / HSP70

Protein Domains for HSPA4L Gene

Suggested Antigen Peptide Sequences for HSPA4L Gene

Graphical View of Domain Structure for InterPro Entry

O95757

UniProtKB/Swiss-Prot:

HS74L_HUMAN :
  • O95757
Family:
  • Belongs to the heat shock protein 70 family.
genes like me logo Genes that share domains with HSPA4L: view

Function for HSPA4L Gene

Molecular function for HSPA4L Gene

UniProtKB/Swiss-Prot Function: Possesses chaperone activity in vitro where it inhibits aggregation of citrate synthase.
UniProtKB/Swiss-Prot Induction: By heat shock and osmotic imbalance.

Gene Ontology (GO) - Molecular Function for HSPA4L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
GO:0005524 ATP binding ISS --
genes like me logo Genes that share ontologies with HSPA4L: view
genes like me logo Genes that share phenotypes with HSPA4L: view

Animal Models for HSPA4L Gene

MGI Knock Outs for HSPA4L:

Animal Model Products

CRISPR Products

miRNA for HSPA4L Gene

miRTarBase miRNAs that target HSPA4L

No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targeting and HOMER Transcription for HSPA4L Gene

Localization for HSPA4L Gene

Subcellular locations from UniProtKB/Swiss-Prot for HSPA4L Gene

Cytoplasm. Nucleus. Note=May translocate to the nucleus after heat shock. {ECO:0000250}.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HSPA4L Gene COMPARTMENTS Subcellular localization image for HSPA4L gene
Compartment Confidence
nucleus 4
cytosol 3
peroxisome 2
mitochondrion 1

Gene Ontology (GO) - Cellular Components for HSPA4L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus ISS --
GO:0005737 cytoplasm ISS --
GO:0005829 cytosol IDA 21231916
genes like me logo Genes that share ontologies with HSPA4L: view

Pathways for HSPA4L Gene

genes like me logo Genes that share pathways with HSPA4L: view

Pathways by source for HSPA4L Gene

1 KEGG pathway for HSPA4L Gene

PCR Array Products

Gene Ontology (GO) - Biological Process for HSPA4L Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000902 cell morphogenesis --
GO:0006457 protein folding ISS --
GO:0006986 response to unfolded protein ISS --
genes like me logo Genes that share ontologies with HSPA4L: view

Compounds for HSPA4L Gene

(1) Novoseek inferred chemical compound relationships for HSPA4L Gene

Compound -log(P) Hits PubMed IDs
urea 42.5 1
genes like me logo Genes that share compounds with HSPA4L: view

Transcripts for HSPA4L Gene

Unigene Clusters for HSPA4L Gene

Heat shock 70kDa protein 4-like:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HSPA4L

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSPA4L Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15a · 15b ^ 16 ^ 17 ^ 18 ^ 19 ^ 20
SP1: -
SP2: -
SP3:

Relevant External Links for HSPA4L Gene

GeneLoc Exon Structure for
HSPA4L
ECgene alternative splicing isoforms for
HSPA4L

Expression for HSPA4L Gene

mRNA expression in normal human tissues for HSPA4L Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for HSPA4L Gene

This gene is overexpressed in Testis (9.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for HSPA4L Gene

SOURCE GeneReport for Unigene cluster for HSPA4L Gene Hs.135554

genes like me logo Genes that share expressions with HSPA4L: view

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for HSPA4L Gene

Orthologs for HSPA4L Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for HSPA4L Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia HSPA4L 35
  • 99.6 (n)
  • 99.28 (a)
HSPA4L 36
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia HSPA4L 35
  • 93.25 (n)
  • 94.74 (a)
HSPA4L 36
  • 91 (a)
OneToOne
dog
(Canis familiaris)
Mammalia HSPA4L 35
  • 94.28 (n)
  • 95.95 (a)
HSPA4L 36
  • 83 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Hspa4l 35
  • 88.33 (n)
  • 92.71 (a)
Hspa4l 16
Hspa4l 36
  • 93 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia HSPA4L 36
  • 89 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 66 (a)
OneToMany
-- 36
  • 83 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Hspa4l 35
  • 88.89 (n)
  • 93.07 (a)
chicken
(Gallus gallus)
Aves HSPA4L 35
  • 78.67 (n)
  • 81.88 (a)
HSPA4L 36
  • 81 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia HSPA4L 36
  • 78 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii HSPA4L 36
  • 67 (a)
OneToOne
si:dkey-21a6.6 35
  • 66.67 (n)
  • 67.97 (a)
fruit fly
(Drosophila melanogaster)
Insecta Hsc70Cb 36
  • 43 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea hsp-110 36
  • 45 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes SSE1 36
  • 37 (a)
ManyToMany
SSE2 36
  • 37 (a)
ManyToMany
corn
(Zea mays)
Liliopsida Zm.4273 35
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.1750 35
sea squirt
(Ciona savignyi)
Ascidiacea CSA.9760 36
  • 46 (a)
OneToMany
Species with no ortholog for HSPA4L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for HSPA4L Gene

ENSEMBL:
Gene Tree for HSPA4L (if available)
TreeFam:
Gene Tree for HSPA4L (if available)

Paralogs for HSPA4L Gene

Paralogs for HSPA4L Gene

Selected SIMAP similar genes for HSPA4L Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with HSPA4L: view

Variants for HSPA4L Gene

Sequence variations from dbSNP and Humsavar for HSPA4L Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs1380154 - 127,801,887(+) GGTCT(C/T)GGTTT missense, reference
rs1380155 -- 127,806,663(+) TGCCC(A/G)GGATT intron-variant
rs1380156 -- 127,793,358(-) TGTCT(G/T)GGAGA intron-variant
rs1459050 -- 127,789,050(-) CTCAG(C/T)ACTAA intron-variant
rs1841156 -- 127,817,211(+) CAGGC(A/G)TGCAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HSPA4L Gene

Variant ID Type Subtype PubMed ID
nsv879915 CNV Gain 21882294
dgv5711n71 CNV Loss 21882294
nsv879921 CNV Loss 21882294
nsv879923 CNV Loss 21882294
nsv830057 CNV Loss 17160897
dgv5713n71 CNV Loss 21882294
nsv437935 CNV Loss 16468122
nsv879928 CNV Loss 21882294
esv2728291 CNV Deletion 23290073
esv2669954 CNV Deletion 23128226

Relevant External Links for HSPA4L Gene

HapMap Linkage Disequilibrium report
HSPA4L

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HSPA4L Gene

Disorders for HSPA4L Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for HSPA4L Gene including...

Search for HSPA4L Gene in MalaCards »

(1) University of Copenhagen DISEASES for HSPA4L Gene

(1) Novoseek inferred disease relationships for HSPA4L Gene

Disease -log(P) Hits PubMed IDs
shock 58.6 3

Relevant External Links for HSPA4L

Genetic Association Database (GAD)
HSPA4L
Human Genome Epidemiology (HuGE) Navigator
HSPA4L
genes like me logo Genes that share disorders with HSPA4L: view

No data available for UniProtKB/Swiss-Prot for HSPA4L Gene

Publications for HSPA4L Gene

  1. Cloning of human cDNAs for Apg-1 and Apg-2, members of the Hsp110 family, and chromosomal assignment of their genes. (PMID: 10524232) Nonoguchi K. … Fujita J. (Gene 1999) 2 3 4 23
  2. Molecular cloning of OSP94: A significant biomarker protein of hypertensive human heart and a member of HSP110 family. (PMID: 19169850) Mala J.G. … Takeuchi S. (Mol. Biotechnol. 2009) 3 4 23
  3. Expression of Apg-1, a member of the Hsp110 family, in the human testis and sperm. (PMID: 11389747) Nonoguchi K. … Fujita J. (Int. J. Urol. 2001) 3 23
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  5. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 3 4

Products for HSPA4L Gene

  • antibodies-online peptides for HSPA4L
  • antibodies-online antibodies for HSPA4L
  • antibodies-online kits for HSPA4L

Sources for HSPA4L Gene

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