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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HSPA4 Gene

protein-coding   GIFtS: 63
GCID: GC05P132415

heat shock 70kDa protein 4

(Previous name: heat shock 70kD protein 4 )
 Explore 180 diseases affiliated with
HSPA4 via our new
 Human Malady Compendium 
Biological research products
for HSPA4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Heat Shock 70kDa Protein 41 2     Heat Shock 70 KDa Protein 42
HS24/P521 2     Heat Shock Protein, 110 KDa2
HSPH21 2     Hsp701
Heat Shock 70kD Protein 41 2     Hsp70 RY2
Heat Shock 70-Related Protein APG-22 3     Hsp70RY1
APG-22     APG23
RY2     HSP70RY3

External Ids:    HGNC: 52371   Entrez Gene: 33082   Ensembl: ENSG000001706067   OMIM: 6011135   UniProtKB: P349323   

Export aliases for HSPA4 gene to outside databases

Previous GC identifers: GC05P131909 GC05P132834 GC05P132418 GC05P132463 GC05P127579


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Gene Wiki entry for HSPA4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000005.9  NC_018916.1  NT_034772.6  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HSPA4 gene promoter:
         CREB   AP-1   ATF-2   deltaCREB   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidHSPA4 promoter sequence
   Search SABiosciences Chromatin IP Primers for HSPA4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HSPA4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q31.1   Ensembl cytogenetic band:  5q31.1   HGNC cytogenetic band: 5q31.1

HSPA4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HSPA4 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05P132415:  view genomic region     (about GC identifiers)

Start:
132,387,654 bp from pter      End:
132,442,141 bp from pter
Size:
54,488 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HSP74_HUMAN, P34932 (See protein sequence)
Recommended Name: Heat shock 70 kDa protein 4  
Size: 840 amino acids; 94331 Da
Subunit: Interacts with TJP1/ZO-1 (By similarity)
Subcellular location: Cytoplasm (Probable)
Sequence caution: Sequence=AAA02807.1; Type=Frameshift; Positions=567, 586, 697, 715, 722;
Secondary accessions: O95756 Q2TAL4

Explore the universe of human proteins at neXtProt for HSPA4: NX_P34932

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P34932

  • HSPA4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_002145.3  
    ENSEMBL proteins: 
     ENSP00000302961  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    R&D Systems Recombinant & Natural Proteins for HSPA4 (HSP70/HSPA1A)
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    OriGene Purified Protein: HSPA4
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    Novus Biologicals HSPA4 Protein
    Novus Biologicals HSPA4 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for HSPA4

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm NAS--
    GO:0005811lipid particle ----
    GO:0005829cytosol ----


    HSPA4 for ontologies           About GeneDecksing



    HSPA4 Antibody Products: 
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    Abcam antibodies for HSPA4 
    Uscn Antibodies for HSPA4
    ThermoFisher Antibody for HSPA4

    Assay Products for HSPA4: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
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    GenScript Custom Assay Services for HSPA4
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for HSPA4


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HSPA4 for domains           About GeneDecksing

    2 InterPro domains/families:
     IPR018181 Heat_shock_70_CS
     IPR013126 Hsp_70_fam

    Graphical View of Domain Structure for InterPro Entry P34932

    ProtoNet protein and cluster: P34932

    UniProtKB/Swiss-Prot: HSP74_HUMAN, P34932
    Similarity: Belongs to the heat shock protein 70 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:
         Genatlas biochemistry entry for HSPA4:
    heat shock 70kDa protein A4,structurally related to aconitase

    miRNA
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    miRTarBase miRNAs that target HSPA4:
    hsa-mir-1 (MIRT003977)

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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat HSPA4
    8/13 QIAGEN miScript miRNA Assays for microRNAs that regulate HSPA4 (see all 13):
    hsa-miR-323-3p hsa-miR-549 hsa-miR-320a hsa-miR-548am hsa-miR-374b hsa-miR-320d hsa-miR-624* hsa-miR-374a
    SwitchGear 3'UTR luciferase reporter plasmidHSPA4 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HSPA4 (see all 6)
    OriGene siRNA: HSPA4
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat HSPA4

    Gene Editing
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    DNA2.0 Custom Protein Engineering Service for HSPA4

    Clone
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    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
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    Browse Sino Biological Human cDNA Clones
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    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HSPA4 

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    Search LifeMap BioReagents cell lines for HSPA4

    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HSPA4

    Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005524ATP binding NAS8335910


    HSPA4 for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-out Hspa4tm1Imad for HSPA4
         6 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Hspa4):
     behavior/neurological  cellular  endocrine/exocrine gland  mortality/aging  nervous system 
     reproductive system 

    HSPA4 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/12 super-pathways (see all 12About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)
    Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)1.00
    Development_Glucocorticoid receptor signaling0.27
    CFTR folding and maturation (norm and CF)0.37
    Development Glucocorticoid receptor signaling0.27
    2Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway1.00
    Parkin-Ubiquitin Proteasomal System pathway0.93
    Proteolysis_Role of Parkin in the Ubiquitin-Proteasomal Pathway0.93
    3Proteolysis Putative ubiquitin pathway
    Proteolysis Putative ubiquitin pathway1.00
    Proteolysis_Putative ubiquitin pathway0.97
    4Glucocorticoid Pathway (Peripheral Tissue), Pharmacodynamics
    Glucocorticoid Pathway (Peripheral Tissue), Pharmacodynamics1.00
    5Androgen Signaling
    Androgen Signaling1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    3 EMD Millipore Pathways for HSPA4
        Development Glucocorticoid receptor signaling
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Proteolysis Putative ubiquitin pathway

    1 R&D Systems Pathway for HSPA4
        Apoptosis Signaling Pathways

    4 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for HSPA4
        Androgen Signaling
    eNOS Signaling
    Cellular Transformation by HTLV1
    Parkinson's Disease Pathway

    5/6 GeneGo (Thomson Reuters) Pathways for HSPA4 (see all 6)
        Mechanisms of CFTR activation by S-nitrosoglutathione (normal and CF)
    Proteolysis Role of Parkin in the Ubiquitin-Proteasomal Pathway
    Regulation of degradation of deltaF508 CFTR in CF
    CFTR folding and maturation (norm and CF)
    Proteolysis Putative ubiquitin pathway

    2 BioSystems Pathways for HSPA4 
        Parkin-Ubiquitin Proteasomal System pathway
    Validated targets of C-MYC transcriptional activation

    1 PharmGKB Pathway for HSPA4
        Glucocorticoid Pathway (Peripheral Tissue), Pharmacodynamics

    1         Kegg Pathway  (Kegg details for HSPA4):
        Antigen processing and presentation


    HSPA4 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HSPA4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/252 Interacting proteins for HSPA4 (P349322, 3 ENSP000003029614) via UniProtKB, MINT, STRING, and/or I2D (see all 252)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TAB1Q157502, 3, ENSP000002161604MINT-49161 I2D: score=2 STRING: ENSP00000216160
    DDIT4Q9NX092, 3, ENSP000003073054MINT-2873798 I2D: score=3 STRING: ENSP00000307305
    CDKN2AQ8N7263, ENSP000003551534I2D: score=1 I2D: score=1 STRING: ENSP00000355153
    TRAF2Q129332, 3, ENSP000002476684MINT-49532 I2D: score=2 STRING: ENSP00000247668
    YWHAZP631042, 3, ENSP000003095034MINT-3319394 I2D: score=1 STRING: ENSP00000309503
    About this table

    Gene Ontology (GO): 5 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006986response to unfolded protein NAS8335910
    GO:0009408response to heat ----
    GO:0032092positive regulation of protein binding ----
    GO:0045040protein import into mitochondrial outer membrane IDA15644312
    GO:0051131chaperone-mediated protein complex assembly IDA15644312


    HSPA4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    HSPA4 for compounds           About GeneDecksing

    EMD Millipore small molecules for HSPA4:
    Small Molecule - inhibitor
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for HSPA4
    10/149 Novoseek chemical compound relationships for HSPA4 gene (see all 149)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    geldanamycin 76.9 44 19995547 (5), 16311509 (3), 18852129 (3), 14633716 (2) (see all 18)
    17-(allylamino)-17-demethoxygeldanamycin 75.7 20 19383903 (4), 20090934 (2), 18429957 (2), 11280726 (1) (see all 11)
    pga1 71.4 31 8548766 (5), 7769835 (5), 8468116 (2), 11037055 (2) (see all 10)
    sodium arsenite 67.1 27 19358893 (4), 11740261 (3), 11322385 (3), 8464927 (1) (see all 16)
    geranylgeranylacetone 64.4 43 17182004 (7), 11693530 (5), 17702888 (4), 17684364 (3) (see all 10)
    ggmp 63.7 2 9447991 (1), 8887650 (1)
    quercetin 56.7 94 8198534 (8), 12969528 (4), 19017364 (4), 14625852 (4) (see all 37)
    cdcl2 54.2 15 9545559 (4), 8375467 (2), 15764298 (2), 9344607 (1) (see all 10)
    pga2 54.2 15 9824682 (4), 20153327 (2), 1549109 (2), 7926370 (1)
    atp 53.2 109 12832480 (3), 9830049 (3), 2203539 (2), 11170435 (2) (see all 74)

    Search CenterWatch for drugs/clinical trials and news about HSPA4 / HSP74 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HSPA4 gene (2 alternative transcripts): 
    NM_198431.1  NM_002154.3  

    Unigene Cluster for HSPA4:

    Heat shock 70kDa protein 4
    Hs.90093  [show with all ESTs]
    Unigene Representative Sequence: NM_002154
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000304858(uc003kyj.3) ENST00000504328 ENST00000514825

    miRNA
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    OriGene 3'-UTR Clone: HSPA4
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    8/13 QIAGEN miScript miRNA Assays for microRNAs that regulate HSPA4 (see all 13):
    hsa-miR-323-3p hsa-miR-549 hsa-miR-320a hsa-miR-548am hsa-miR-374b hsa-miR-320d hsa-miR-624* hsa-miR-374a
    SwitchGear 3'UTR luciferase reporter plasmidHSPA4 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for HSPA4 (see all 6)
    OriGene siRNA: HSPA4
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    Clone
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    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for HSPA4 (see all 3)
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    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: HSPA4 (NM_002154)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for HSPA4
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat HSPA4 
    Primer
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    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for HSPA4
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HSPA4
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HSPA4

    Additional cDNA sequence: 

    AB023420.1 AB074275.1 AB209151.1 AK294859.1 AK295847.1 AK297762.1 AK299710.1 AK300050.1 
    AK300770.1 AK303382.1 AK304578.1 AK311097.1 AK311125.1 AK311135.1 AK311224.1 AK311299.1 
    AK311316.1 AK311422.1 AK311457.1 AK311465.1 AK311466.1 AK311471.1 AK311483.1 AK311615.1 
    AK311632.1 AK315862.1 AK315871.1 AK315875.1 AK315887.1 BC002526.2 BC110861.1 BC126122.1 
    BC126124.1 BT007375.1 L12723.1 X67643.1 

    18 DOTS entries:

    DT.100821700  DT.445307  DT.100821697  DT.40105813  DT.95169241  DT.217041  DT.95169252  DT.100821693 
    DT.100821695  DT.91828289  DT.99929734  DT.100030800  DT.95169249  DT.120883687  DT.120883716  DT.95088201 
    DT.95169244  DT.70100908 

    24/401 AceView cDNA sequences (see all 401):

    BC002526 CK905042 AI005006 AA665471 BU685927 BU171424 CN481241 AU138494 
    BE857936 AI799801 BE388253 BU542656 NM_002154 AI742972 BE388732 AI911599 
    BF026277 AA948300 BM787246 BM746586 AA433916 AA442855 BX482095 AA370218 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HSPA4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GATCCAGTTG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See HSPA4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HSPA4

    SOURCE GeneReport for Unigene cluster: Hs.90093
        SABiosciences Expression via Pathway-Focused PCR Arrays including HSPA4 (see all 9): 
              mTOR Signaling in human mouse rat
              Parkinson's Disease in human mouse rat
              Stress & Toxicity PathwayFinder in human mouse rat
              Heat Shock Proteins & Chaperones in human mouse rat
              cAMP / Ca2+ Signaling PathwayFinder in human mouse rat

    Primer
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HSPA4

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the last universal common ancestor (LUCA).

    Orthologs for HSPA4 gene from 10/37 species (see all 37)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves HSPA41 heat shock 70kDa protein 4 79.71(n)
    85.92(a)
      416339  XM_003642094.1  XP_003642142.1 
    lizard
    (Anolis carolinensis)
    Reptilia HSPA46
    --
    85(a)
    1 ↔ 1
    2(127095467-127135197)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.57992 Xenopus laevis, Similar to heat shock 70 kDa protein more 79.73(n)    BC041515.1 
    zebrafish
    (Danio rerio)
    Actinopterygii wufc41d052 Danio rerio cDNA clone MGC55506 IMAGE2641035, complete more 76.26(n)    BC051152.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta Hsc70Cb6
    Hsc70Cb
    43(a)
    1 → many
    3L(14030119-14036786)
    worm
    (Caenorhabditis elegans)
    Secernentea C30C11.43 Msi3p 42(a)   III(8515890-8517059)   --
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes SSE11 Sse1p 49.53(n)
    41.46(a)
      855998   NP_015219.1 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons HSP911 heat shock protein 91 50.97(n)
    41.61(a)
      844333  NM_106642.4  NP_178111.1 
    rice
    (Oryza sativa)
    Liliopsida Os.264952 Oryza sativa (japonica cultivar-group) cDNA cloneJ more 69.88(n)    AK122040.1 
    E. coli
    (Escherichia coli)
    Gamma proteobacteria hscC6
    Hsp70 family chaperone Hsc62, binds to RpoD and in...
    20(a)
    1 → many
    Chromosome(680946-682616)


    ENSEMBL Gene Tree for HSPA4 (if available)
    TreeFam Gene Tree for HSPA4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for HSPA4 gene
    HYOU12  HSPA4L2  HSPH12  
    15 SIMAP similar genes for HSPA4 using alignment to 2 protein entries:     HSP74_HUMAN (see all proteins):
    HS24/P52    HS24/p52    HSPA4L    HSPH1    HSP70-1    HSPA7
    HSPA1A    HSPA1L    HSPA14    HSPA1B    HSPA6    HSPA8
    HSPA2    HSPA5    HYOU1

    HSPA4 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1017 NCBI SNPs in HSPA4 are shown (see all 1017    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 5 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1907473071,2
    --132385663(+) ATAAAA/GTTTAC 1 -- us2k10--------
    rs1483143911,2
    C,--132385767(+) TTCCC-/AAACTG
            
    AAACT
    1 -- us2k10--------
    rs579768641,2
    C--132385772(+) AAACT-/GAAACT
            
    CTGTA
    1 -- us2k10--------
    rs1808262911,2
    --132385879(+) TAAATG/TTTGAA 1 -- us2k10--------
    rs1859264851,2
    --132385906(+) AAAAAA/GAATTA 1 -- us2k10--------
    rs1152612561,2
    --132386033(+) ATACAC/GTAAAT 1 -- us2k11Minor allele frequency- G:0.01NA 120
    rs93276401,2
    C,F,A,H,--132386105(+) AATAAG/ACTACT 1 -- us2k122Minor allele frequency- A:0.43NS EA WA NA CSA 2348
    rs1490541331,2
    --132386222(+) CACCTC/GGTACT 1 -- us2k10--------
    rs77301251,2
    C,F,H,--132386223(+) ACCTGG/ATACTT 1 -- us2k119Minor allele frequency- A:0.18NS EA WA NA CSA 2341
    rs77121811,2
    C,A,--132386241(+) AAGAAT/CTAACA 1 -- us2k1 tfbs34Minor allele frequency- C:0.31WA NA 242

    HapMap Linkage Disequilibrium report for HSPA4 (132387654 - 132442141 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for HSPA4: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HSPA4
    DNA2.0 Custom Variant and Variant Library Synthesis for HSPA4

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HSPA4 for disorders           About GeneDecksing

    OMIM gene information: 601113    OMIM disorders: --

    20/180 diseases for HSPA4 (see all 180):    About MalaCards
    spinocerebellar ataxia type 7    inner ear disease    autoimmune inner ear disease    human t-cell leukemia virus type 1
    hypersensitivity reaction type ii disease    lichen planus    transient cerebral ischemia    graft versus host disease
    non-small cell lung carcinoma    arterial occlusive disease    peripheral arterial occlusive disease    spinocerebellar ataxia
    oral lichen planus    pre-eclampsia    bacterial vaginosis    squamous cell carcinoma
    cervical intraepithelial neoplasia    multiple endocrine neoplasia    coronary heart disease    menieres disease

    5 diseases from the University of Copenhagen DISEASES database for HSPA4:
    Vascular disease     Cancer     Neurodegenerative disease     Brain disease
    Toxic encephalopathy

    10/91 Novoseek disease relationships for HSPA4 gene (see all 91)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    shock 95.2 1759 12969528 (9), 1910812 (5), 18088459 (5), 19670094 (4) (see all 99)
    tumors 47.9 385 16224158 (5), 19309230 (5), 16769335 (5), 9585177 (4) (see all 99)
    ischemia 40.7 139 8249024 (7), 8364736 (6), 8239864 (6), 7982052 (4) (see all 47)
    cancer 40 122 19716411 (4), 15553822 (4), 15741319 (4), 19017364 (3) (see all 69)
    cell damage 35.6 15 20123033 (2), 16492383 (2), 17209876 (1), 7922267 (1) (see all 10)
    spinocerebellar ataxia type 7 34.7 1 16039988 (1)
    neurodegenerative diseases 34.6 5 15673657 (1), 10562718 (1), 17536171 (1), 11044589 (1) (see all 5)
    necrosis 34.1 54 11341981 (3), 9755110 (2), 18336662 (2), 7749813 (2) (see all 40)
    muscular dystrophy oculopharyngeal 33.5 1 14729833 (1)
    erythroleukemia 30.4 8 9738016 (2), 17213196 (1), 9389084 (1), 16706166 (1) (see all 7)

    Genetic Association Database (GAD): HSPA4
    Human Genome Epidemiology (HuGE) Navigator: HSPA4 (8 documents)

    Export disorders for HSPA4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HSPA4 gene, integrated from 9 sources (see all 1824):
    (articles sorted by number of sources associating them with HSPA4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Molecular cloning of a novel human hsp70 from a B cell line and its assignment to chromosome 5. (PubMed id 8335910)1, 2, 3 Fathallah D.M.... Arnaout M.A. (1993)
    2. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455)1, 2 Rush J.... Comb M.J. (2005)
    3. 1267 HSP70-2 polymorphism as a risk factor for carotid plaque rupture and cerebral ischaemia in old type 2 diabetes-atherosclerotic patients. (PubMed id 15992611)1, 4 Giacconi R....Mocchegiani E. (2005)
    4. Polymorphisms in the tumor necrosis factor-alpha gene at position -308 and the inducible 70 kd heat shock protein gene at position +1267 in multifetal pregnancies and preterm premature rupture of fetal membranes. (PubMed id 15507967)1, 4 Kalish R.B....Witkin S.S. (2004)
    5. Cloning of human cDNAs for Apg-1 and Apg-2, members of the Hsp110 family, and chromosomal assignment of their genes. (PubMed id 10524232)1, 9 Nonoguchi K.... Fujita J. (1999)
    6. Identification of residues on Hsp70 and Hsp90 ubiquit inated by the cochaperone CHIP. (PubMed id 19913553)1, 9 Kundrat L. and Regan L. (2010)
    7. A dual role for HSP90 and HSP70 in the inflammatory m yopathies: from muscle fiber protection to active invasion by macrophages. (PubMed id 19758187)1, 9 De Paepe B....De Bleecker J.L. (2009)
    8. [Expression characteristics of heat shock protein 70 and pim-1 gene in bone marrow mononuclear cells from leukemia patients and their clinical significance] (PubMed id 18426646)1, 9 Li Y....Peng H.L. (2008)
    9. Hsp70 interacts with the retroviral restriction facto r TRIM5alpha and assists the folding of TRIM5alpha. (PubMed id 20053985)1, 9 Hwang C.Y....Song B. (2010)
    10. Helicobacter pylori inhibits expression of heat shock protein 70 (HSP70) in human epithelial cell line. Importance of Cag A protein. (PubMed id 16845230)1, 9 Targosz A....Pawlik W.W. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
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    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3308 HGNC: 5237 AceView: HSPA4 Ensembl:ENSG00000170606 euGenes: HUgn3308
    ECgene: HSPA4 Kegg: 3308 H-InvDB: HSPA4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HSPA4 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for HSPA4 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HSPA4 gene:
    Search GeneIP for patents involving HSPA4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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