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Aliases for HSFY1P1 Gene

Aliases for HSFY1P1 Gene

  • Heat Shock Transcription Factor, Y-Linked 1 Pseudogene 1 2 3
  • Cat Eye Syndrome Chromosome Region, Candidate 8 (Non-Protein Coding) 2 3
  • Heat Shock Transcription Factor, Y-Linked-Like 1, Pseudogene 3
  • Heat Shock Transcription Factor, Y-Linked-Like Pseudogene 1 3
  • Cat Eye Syndrome Chromosome Region, Candidate 8 2
  • NCRNA00016 3
  • HSFYL1 3
  • HSFYP1 3
  • CECR8 3

External Ids for HSFY1P1 Gene

Previous HGNC Symbols for HSFY1P1 Gene

  • CECR8

Previous GeneCards Identifiers for HSFY1P1 Gene

  • GC22P017313
  • GC22P001127

Summaries for HSFY1P1 Gene

GeneCards Summary for HSFY1P1 Gene

HSFY1P1 (Heat Shock Transcription Factor, Y-Linked 1 Pseudogene 1) is a Pseudogene. Diseases associated with HSFY1P1 include cat eye syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSFY1P1 Gene

Genomics for HSFY1P1 Gene

Genomic Location for HSFY1P1 Gene

Start:
16,827,474 bp from pter
End:
16,829,335 bp from pter
Size:
1,862 bases
Orientation:
Plus strand

Genomic View for HSFY1P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HSFY1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSFY1P1 Gene

No data available for Regulatory Elements for HSFY1P1 Gene

Proteins for HSFY1P1 Gene

Post-translational modifications for HSFY1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSFY1P1 Gene

Domains for HSFY1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSFY1P1 Gene

Function for HSFY1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HSFY1P1 Gene

Localization for HSFY1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HSFY1P1 Gene

Pathways for HSFY1P1 Gene

SuperPathways for HSFY1P1 Gene

No Data Available

Interacting Proteins for HSFY1P1 Gene

Gene Ontology (GO) - Biological Process for HSFY1P1 Gene

None

No data available for Pathways by source for HSFY1P1 Gene

Transcripts for HSFY1P1 Gene

mRNA/cDNA for HSFY1P1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HSFY1P1 Gene

Heat shock transcription factor, Y-linked 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HSFY1P1 Gene

No ASD Table

Relevant External Links for HSFY1P1 Gene

GeneLoc Exon Structure for
HSFY1P1
ECgene alternative splicing isoforms for
HSFY1P1

Expression for HSFY1P1 Gene

mRNA expression in normal human tissues for HSFY1P1 Gene

mRNA differential expression in normal tissues according to GTEx for HSFY1P1 Gene

This gene is overexpressed in Testis (53.0).

SOURCE GeneReport for Unigene cluster for HSFY1P1 Gene Hs.143955

genes like me logo Genes that share expressions with HSFY1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for HSFY1P1 Gene

Orthologs for HSFY1P1 Gene

Evolution for HSFY1P1 Gene

ENSEMBL:
Gene Tree for HSFY1P1 (if available)
TreeFam:
Gene Tree for HSFY1P1 (if available)

No data available for Orthologs for HSFY1P1 Gene

Paralogs for HSFY1P1 Gene

No data available for Paralogs for HSFY1P1 Gene

Variants for HSFY1P1 Gene

Sequence variations from dbSNP and Humsavar for HSFY1P1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs175142 -- 16,826,509(+) ATACA(C/T)GAATA upstream-variant-2KB
rs175143 -- 16,827,014(+) cacaa(C/T)ctcag upstream-variant-2KB
rs175144 -- 16,827,033(+) agctt(C/T)cgcct upstream-variant-2KB
rs175145 -- 16,827,351(+) ACTGG(A/G)AAGTA upstream-variant-2KB
rs175146 -- 16,828,406(+) AGTAA(A/G)CAATG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HSFY1P1 Gene

Variant ID Type Subtype PubMed ID
nsv527637 CNV Gain 19592680
nsv834117 CNV Gain 17160897
esv23434 CNV Loss 19812545

Relevant External Links for HSFY1P1 Gene

HapMap Linkage Disequilibrium report
HSFY1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HSFY1P1 Gene

Disorders for HSFY1P1 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for HSFY1P1 Gene including...

Search for HSFY1P1 Gene in MalaCards »
genes like me logo Genes that share disorders with HSFY1P1: view

No data available for UniProtKB/Swiss-Prot for HSFY1P1 Gene

Publications for HSFY1P1 Gene

  1. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (PMID: 11381032) Footz T.K. … McDermid H.E. (Genome Res. 2001) 2 3

Products for HSFY1P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HSFY1P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HSFY1P1
    • Block miRNA regulation of HSFY1P1 using miScript Target Protectors

    Sources for HSFY1P1 Gene

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