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Aliases for HSFY1P1 Gene

Aliases for HSFY1P1 Gene

  • Heat Shock Transcription Factor, Y-Linked 1 Pseudogene 1 2 3 5
  • Cat Eye Syndrome Chromosome Region, Candidate 8 (Non-Protein Coding) 2 3
  • Heat Shock Transcription Factor, Y-Linked-Like 1, Pseudogene 3
  • Heat Shock Transcription Factor, Y-Linked-Like Pseudogene 1 3
  • Cat Eye Syndrome Chromosome Region, Candidate 8 2
  • NCRNA00016 3
  • HSFYL1 3
  • HSFYP1 3
  • CECR8 3

External Ids for HSFY1P1 Gene

Previous HGNC Symbols for HSFY1P1 Gene

  • CECR8

Previous GeneCards Identifiers for HSFY1P1 Gene

  • GC22P017313
  • GC22P001127

Summaries for HSFY1P1 Gene

GeneCards Summary for HSFY1P1 Gene

HSFY1P1 (Heat Shock Transcription Factor, Y-Linked 1 Pseudogene 1) is a Pseudogene. Diseases associated with HSFY1P1 include Cat Eye Syndrome.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSFY1P1 Gene

Genomics for HSFY1P1 Gene

Regulatory Elements for HSFY1P1 Gene

Enhancers for HSFY1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G016774 1 Ensembl ENCODE 12.1 -52.4 -52409 0.7 BCOR HNRNPUL1 CTCF ATF1 RAD21 NCOR1 SMC3 CREM ZNF654 NR4A1 XKR3 HSFY1P1 LINC01665
GH22G016917 0.7 ENCODE 10.5 +90.2 90152 0.2 ZNF263 CTCF MAZ ZNF654 ATF1 GFI1B TRIM22 REST RAD21 JUND GAB4 HSFY1P1 XKR3 IGKV2OR22-3 IGKV2OR22-4
GH22G016824 1.4 FANTOM5 Ensembl ENCODE 0.7 -2.4 -2372 1.4 FOSL1 ZNF316 ZNF350 FOS NFE2 MAFK RNF2 BHLHE40 USF2 MAFG IL17RA ADA2 HSFY1P1 XKR3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HSFY1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HSFY1P1 Gene

Chromosome:
22
Start:
16,827,474 bp from pter
End:
16,829,335 bp from pter
Size:
1,862 bases
Orientation:
Plus strand

Genomic View for HSFY1P1 Gene

Genes around HSFY1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSFY1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSFY1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSFY1P1 Gene

Proteins for HSFY1P1 Gene

Post-translational modifications for HSFY1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSFY1P1 Gene

Domains & Families for HSFY1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSFY1P1 Gene

Function for HSFY1P1 Gene

Phenotypes for HSFY1P1 Gene

GenomeRNAi human phenotypes for HSFY1P1:
genes like me logo Genes that share phenotypes with HSFY1P1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSFY1P1 Gene

Localization for HSFY1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HSFY1P1 Gene

Pathways & Interactions for HSFY1P1 Gene

SuperPathways for HSFY1P1 Gene

No Data Available

Interacting Proteins for HSFY1P1 Gene

Gene Ontology (GO) - Biological Process for HSFY1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSFY1P1 Gene

Drugs & Compounds for HSFY1P1 Gene

No Compound Related Data Available

Transcripts for HSFY1P1 Gene

mRNA/cDNA for HSFY1P1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HSFY1P1 Gene

Heat shock transcription factor, Y-linked 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HSFY1P1 Gene

No ASD Table

Relevant External Links for HSFY1P1 Gene

GeneLoc Exon Structure for
HSFY1P1
ECgene alternative splicing isoforms for
HSFY1P1

Expression for HSFY1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSFY1P1 Gene

mRNA differential expression in normal tissues according to GTEx for HSFY1P1 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of HSFY1P1 Gene:

HSFY1P1

SOURCE GeneReport for Unigene cluster for HSFY1P1 Gene:

Hs.143955
genes like me logo Genes that share expression patterns with HSFY1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSFY1P1 Gene

Orthologs for HSFY1P1 Gene

Evolution for HSFY1P1 Gene

ENSEMBL:
Gene Tree for HSFY1P1 (if available)
TreeFam:
Gene Tree for HSFY1P1 (if available)

No data available for Orthologs for HSFY1P1 Gene

Paralogs for HSFY1P1 Gene

No data available for Paralogs for HSFY1P1 Gene

Variants for HSFY1P1 Gene

Sequence variations from dbSNP and Humsavar for HSFY1P1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs1000896255 -- 16,829,427(+) AAAAA(A/T)ATATG downstream-variant-500B
rs1001326897 -- 16,829,142(+) CTGAT(A/C)CATCA nc-transcript-variant
rs1002302592 -- 16,827,792(+) TCCCA(C/G)TAAAC nc-transcript-variant
rs1002853736 -- 16,826,457(+) TGAAA(A/G)TATTA upstream-variant-2KB
rs1002884964 -- 16,826,197(+) CTGTT(C/T)TATAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for HSFY1P1 Gene

Variant ID Type Subtype PubMed ID
dgv4459n100 CNV gain 25217958
dgv4460n100 CNV gain 25217958
dgv4461n100 CNV loss 25217958
dgv4463n100 CNV gain 25217958
dgv7947n54 CNV gain 21841781
esv23434 CNV loss 19812545
esv2763696 CNV gain 21179565
esv3568223 CNV loss 25503493
esv3575406 CNV gain 25503493
esv3647196 CNV gain 21293372
nsv1064641 CNV gain 25217958
nsv1067110 CNV gain 25217958
nsv1067241 CNV loss 25217958
nsv527637 CNV gain 19592680
nsv588062 CNV gain 21841781
nsv588077 CNV gain 21841781
nsv588081 CNV loss 21841781
nsv588083 CNV loss 21841781
nsv588084 CNV loss 21841781
nsv834117 CNV gain 17160897

Relevant External Links for HSFY1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSFY1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HSFY1P1 Gene

Disorders for HSFY1P1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for HSFY1P1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
cat eye syndrome
  • ces
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for HSFY1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HSFY1P1
genes like me logo Genes that share disorders with HSFY1P1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for HSFY1P1 Gene

Publications for HSFY1P1 Gene

  1. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (PMID: 11381032) Footz T.K. … McDermid H.E. (Genome Res. 2001) 2 3 64

Products for HSFY1P1 Gene

Sources for HSFY1P1 Gene

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