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Aliases for HSF2BP Gene

Aliases for HSF2BP Gene

  • Heat Shock Transcription Factor 2 Binding Protein 2 3 5
  • Heat Shock Factor 2 Binding Protein 2

External Ids for HSF2BP Gene

Previous GeneCards Identifiers for HSF2BP Gene

  • GC21M041458
  • GC21M041541
  • GC21M043805
  • GC21M043775
  • GC21M044949
  • GC21M030317

Summaries for HSF2BP Gene

Entrez Gene Summary for HSF2BP Gene

  • HSF2 binding protein (HSF2BP) associates with HSF2. The interaction occurs between the trimerization domain of HSF2 and the amino terminal hydrophilic region of HSF2BP that comprises two leucine zipper motifs. HSF2BP may therefore be involved in modulating HSF2 activation. [provided by RefSeq, Jul 2008]

GeneCards Summary for HSF2BP Gene

HSF2BP (Heat Shock Transcription Factor 2 Binding Protein) is a Protein Coding gene. GO annotations related to this gene include binding.

UniProtKB/Swiss-Prot for HSF2BP Gene

  • May be involved in modulating HSF2 activation in testis (PubMed:9651507). Inhibits BNC1 transcriptional activity during spermatogenesis, probably by sequestering it in the cytoplasm (By similarity).

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSF2BP Gene

Genomics for HSF2BP Gene

Regulatory Elements for HSF2BP Gene

Enhancers for HSF2BP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around HSF2BP on UCSC Golden Path with GeneCards custom track

Genomic Location for HSF2BP Gene

Chromosome:
21
Start:
43,529,186 bp from pter
End:
43,659,499 bp from pter
Size:
130,314 bases
Orientation:
Minus strand

Genomic View for HSF2BP Gene

Genes around HSF2BP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSF2BP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSF2BP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSF2BP Gene

Proteins for HSF2BP Gene

  • Protein details for HSF2BP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O75031-HSF2B_HUMAN
    Recommended name:
    Heat shock factor 2-binding protein
    Protein Accession:
    O75031
    Secondary Accessions:
    • B4DX36

    Protein attributes for HSF2BP Gene

    Size:
    334 amino acids
    Molecular mass:
    37645 Da
    Quaternary structure:
    • Associates with HSF2 (PubMed:9651507). The interaction seems to occur between the trimerization domain of HSF2 and the N-terminal hydrophilic region of HSF2BP (PubMed:9651507). Interacts (via C-terminus) with BNC1 (By similarity).

    Alternative splice isoforms for HSF2BP Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for HSF2BP Gene

Post-translational modifications for HSF2BP Gene

  • Sumoylated by UBE2I in response to MEKK1-mediated stimuli.
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for HSF2BP Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for HSF2BP Gene

Domains & Families for HSF2BP Gene

Protein Domains for HSF2BP Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HSF2BP: view

No data available for Gene Families and UniProtKB/Swiss-Prot for HSF2BP Gene

Function for HSF2BP Gene

Molecular function for HSF2BP Gene

UniProtKB/Swiss-Prot Function:
May be involved in modulating HSF2 activation in testis (PubMed:9651507). Inhibits BNC1 transcriptional activity during spermatogenesis, probably by sequestering it in the cytoplasm (By similarity).
genes like me logo Genes that share phenotypes with HSF2BP: view

Animal Models for HSF2BP Gene

MGI Knock Outs for HSF2BP:

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for HSF2BP Gene

Localization for HSF2BP Gene

Subcellular locations from UniProtKB/Swiss-Prot for HSF2BP Gene

Cytoplasm.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HSF2BP Gene COMPARTMENTS Subcellular localization image for HSF2BP gene
Compartment Confidence
cytosol 5
nucleus 2
golgi apparatus 1
mitochondrion 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for HSF2BP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol IDA 16780588
genes like me logo Genes that share ontologies with HSF2BP: view

Pathways & Interactions for HSF2BP Gene

SuperPathways for HSF2BP Gene

No Data Available

Gene Ontology (GO) - Biological Process for HSF2BP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006366 transcription from RNA polymerase II promoter TAS 9651507
GO:0007283 spermatogenesis TAS 9651507
GO:0098779 mitophagy in response to mitochondrial depolarization IGI 22020285
genes like me logo Genes that share ontologies with HSF2BP: view

No data available for Pathways by source and SIGNOR curated interactions for HSF2BP Gene

Drugs & Compounds for HSF2BP Gene

No Compound Related Data Available

Transcripts for HSF2BP Gene

Unigene Clusters for HSF2BP Gene

Heat shock transcription factor 2 binding protein:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSF2BP Gene

No ASD Table

Relevant External Links for HSF2BP Gene

GeneLoc Exon Structure for
HSF2BP
ECgene alternative splicing isoforms for
HSF2BP

Expression for HSF2BP Gene

mRNA expression in normal human tissues for HSF2BP Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for HSF2BP Gene

This gene is overexpressed in Testis (x25.1).

Protein differential expression in normal tissues from HIPED for HSF2BP Gene

This gene is overexpressed in Testis (41.4), Fetal ovary (15.5), and Brain (12.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for HSF2BP Gene



Protein tissue co-expression partners for HSF2BP Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of HSF2BP Gene:

HSF2BP

SOURCE GeneReport for Unigene cluster for HSF2BP Gene:

Hs.406157

mRNA Expression by UniProt/SwissProt for HSF2BP Gene:

O75031-HSF2B_HUMAN
Tissue specificity: Testis specific.
genes like me logo Genes that share expression patterns with HSF2BP: view

Primer Products

Orthologs for HSF2BP Gene

This gene was present in the common ancestor of chordates.

Orthologs for HSF2BP Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia HSF2BP 34
  • 86.63 (n)
  • 93.11 (a)
HSF2BP 35
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia HSF2BP 34
  • 88.82 (n)
  • 93.11 (a)
HSF2BP 35
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Hsf2bp 34
  • 85.43 (n)
  • 88.32 (a)
Hsf2bp 16
Hsf2bp 35
  • 87 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia HSF2BP 34
  • 99.4 (n)
  • 99.4 (a)
HSF2BP 35
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Hsf2bp 34
  • 85.23 (n)
  • 88.02 (a)
oppossum
(Monodelphis domestica)
Mammalia HSF2BP 35
  • 77 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia HSF2BP 35
  • 74 (a)
OneToOne
chicken
(Gallus gallus)
Aves HSF2BP 34
  • 75.05 (n)
  • 74.23 (a)
HSF2BP 35
  • 71 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia HSF2BP 35
  • 73 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia hsf2bp 34
  • 59.54 (n)
  • 54.93 (a)
zebrafish
(Danio rerio)
Actinopterygii hsf2bp 34
  • 60.64 (n)
  • 50 (a)
hsf2bp 35
  • 41 (a)
OneToOne
Species where no ortholog for HSF2BP was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for HSF2BP Gene

ENSEMBL:
Gene Tree for HSF2BP (if available)
TreeFam:
Gene Tree for HSF2BP (if available)

Paralogs for HSF2BP Gene

No data available for Paralogs for HSF2BP Gene

Variants for HSF2BP Gene

Sequence variations from dbSNP and Humsavar for HSF2BP Gene

SNP ID Clin Chr 21 pos Sequence Context AA Info Type
rs229340 -- 43,535,523(-) accac(A/G)cccag intron-variant
rs229356 -- 43,565,230(-) GAAGG(C/T)GAACT intron-variant
rs229357 -- 43,562,836(-) TTACC(A/G)CCTTG intron-variant
rs374262 -- 43,581,346(+) ACGCC(A/T)CTGAA intron-variant
rs378230 -- 43,583,866(+) CCTGC(C/T)GAGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HSF2BP Gene

Variant ID Type Subtype PubMed ID
dgv109n6 CNV deletion 16902084
dgv1275e212 CNV loss 25503493
dgv2399n106 CNV deletion 24896259
dgv2503e59 CNV duplication 20981092
dgv7873n54 CNV loss 21841781
esv1010827 CNV gain 20482838
esv1180297 CNV deletion 17803354
esv2108372 CNV deletion 18987734
esv2421821 CNV deletion 20811451
esv2474541 CNV loss 19546169
esv2627317 CNV deletion 19546169
esv2659710 CNV deletion 23128226
esv2723610 CNV deletion 23290073
esv2723611 CNV deletion 23290073
esv2723612 CNV deletion 23290073
esv2723613 CNV deletion 23290073
esv27911 CNV loss 19812545
esv2807 CNV loss 18987735
esv29530 CNV gain 19812545
esv3449507 CNV duplication 20981092
esv3557786 CNV deletion 23714750
esv3557787 CNV deletion 23714750
esv3568214 CNV loss 25503493
esv3575396 CNV gain 25503493
esv3647106 CNV loss 21293372
esv3647107 CNV loss 21293372
esv3647108 CNV loss 21293372
esv3647109 CNV gain 21293372
esv3647110 CNV gain 21293372
esv7883 CNV loss 19470904
nsv1061539 CNV loss 25217958
nsv1065359 CNV gain 25217958
nsv1070865 CNV deletion 25765185
nsv1135909 CNV deletion 24896259
nsv1136645 CNV deletion 24896259
nsv1144953 CNV deletion 24896259
nsv1147937 CNV duplication 26484159
nsv1148607 CNV deletion 26484159
nsv1160718 OTHER complex 26073780
nsv187429 CNV deletion 16902084
nsv3537 CNV deletion 18451855
nsv436338 CNV deletion 17901297
nsv442789 CNV loss 18776908
nsv459289 CNV loss 19166990
nsv470903 CNV loss 18288195
nsv511632 CNV loss 21212237
nsv512641 CNV loss 21212237
nsv514957 CNV loss 21397061
nsv521700 CNV loss 19592680
nsv587689 CNV loss 21841781
nsv587690 CNV loss 21841781
nsv587691 CNV gain 21841781
nsv587692 CNV gain+loss 21841781
nsv587693 CNV gain 21841781
nsv587694 CNV loss 21841781
nsv587695 CNV gain 21841781
nsv587696 CNV gain+loss 21841781
nsv587697 CNV loss 21841781
nsv587700 CNV loss 21841781
nsv820925 CNV deletion 20802225
nsv828905 CNV gain+loss 20364138
nsv828906 CNV loss 20364138
nsv834106 CNV loss 17160897
nsv953641 CNV deletion 24416366
nsv965983 CNV duplication 23825009
nsv965984 CNV duplication 23825009

Variation tolerance for HSF2BP Gene

Residual Variation Intolerance Score: 61.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.29; 25.74% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for HSF2BP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSF2BP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HSF2BP Gene

Disorders for HSF2BP Gene

Relevant External Links for HSF2BP

Genetic Association Database (GAD)
HSF2BP
Human Genome Epidemiology (HuGE) Navigator
HSF2BP
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HSF2BP

No disorders were found for HSF2BP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HSF2BP Gene

Publications for HSF2BP Gene

  1. Novel testis-specific protein that interacts with heat shock factor 2. (PMID: 9651507) Yoshima T. … Yanagi H. (Gene 1998) 2 3 4 22 65
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 65
  3. Ubc9 fusion-directed SUMOylation identifies constitutive and inducible SUMOylation. (PMID: 17709345) Jakobs A. … Niedenthal R. (Nucleic Acids Res. 2007) 3 4 65
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 65
  5. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 4 65

Products for HSF2BP Gene

Sources for HSF2BP Gene

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