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Aliases for HSD3BP5 Gene

Aliases for HSD3BP5 Gene

  • Hydroxy-Delta-5-Steroid Dehydrogenase, 3 Beta, Pseudogene 5 2 3 5

External Ids for HSD3BP5 Gene

Previous GeneCards Identifiers for HSD3BP5 Gene

  • GC01U990090
  • GC01P120148

Summaries for HSD3BP5 Gene

GeneCards Summary for HSD3BP5 Gene

HSD3BP5 (Hydroxy-Delta-5-Steroid Dehydrogenase, 3 Beta, Pseudogene 5) is a Pseudogene.

Additional gene information for HSD3BP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSD3BP5 Gene

Genomics for HSD3BP5 Gene

GeneHancer (GH) Regulatory Elements for HSD3BP5 Gene

Promoters and enhancers for HSD3BP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I119765 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 21.6 +166.6 166554 4.5 ELF3 FOXA2 NFIB ARID4B ZNF195 THRB RAD21 RARA YY1 SCRT2 HMGCS2 HSD3BP5 LOC101929147 ADAM30 REG4 ZNF697 GC01P119741 PIR35373
GH01I119672 Enhancer 1.1 Ensembl ENCODE 5.6 +73.2 73189 3.6 FOXA2 ARID4B RAD21 RFX5 YY1 ZNF335 ZNF766 ZNF366 ZNF143 FOS ZNF697 PHGDH HSD3BP5 LOC105378937
GH01I119971 Enhancer 0.8 dbSUPER 4.7 +373.9 373920 6.9 FOXA2 INSM2 FEZF1 RAD21 ZNF366 ZSCAN5C SCRT2 ATF7 FOS ZNF398 ADAM30 NOTCH2 ENSG00000261662 HSD3BP5 GC01P119934
GH01I119605 Enhancer 0.5 FANTOM5 0.8 +4.0 3987 0.2 PKNOX1 YY2 ZNF366 CREB1 FOS ZNF600 ZNF697 PHGDH HSD3B1 HSD3BP5 GC01M119620
GH01I119613 Enhancer 0.7 ENCODE 0.4 +12.7 12710 0.2 CTCF PKNOX1 RB1 ARNT ARID4B MAX ZNF2 ZNF48 RAD21 TEAD3 ZNF697 PHGDH ADAM30 GC01M119620 HSD3BP5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HSD3BP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HSD3BP5 Gene

Genomic Locations for HSD3BP5 Gene
chr1:119,601,253-119,609,449
(GRCh38/hg38)
Size:
8,197 bases
Orientation:
Plus strand
chr1:120,143,876-120,152,072
(GRCh37/hg19)

Genomic View for HSD3BP5 Gene

Genes around HSD3BP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HSD3BP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HSD3BP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSD3BP5 Gene

Proteins for HSD3BP5 Gene

Post-translational modifications for HSD3BP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSD3BP5 Gene

Domains & Families for HSD3BP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSD3BP5 Gene

Function for HSD3BP5 Gene

Molecular function for HSD3BP5 Gene

GENATLAS Biochemistry:
hydroxysteroid 3-beta dehydrogenase/steroid delta 5-delta 4 isomerase, pseudogene 5

Phenotypes From GWAS Catalog for HSD3BP5 Gene

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HSD3BP5 Gene

Localization for HSD3BP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HSD3BP5 Gene

Pathways & Interactions for HSD3BP5 Gene

SuperPathways for HSD3BP5 Gene

No Data Available

Interacting Proteins for HSD3BP5 Gene

Gene Ontology (GO) - Biological Process for HSD3BP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HSD3BP5 Gene

Drugs & Compounds for HSD3BP5 Gene

No Compound Related Data Available

Transcripts for HSD3BP5 Gene

mRNA/cDNA for HSD3BP5 Gene

(7) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HSD3BP5 Gene

No ASD Table

Relevant External Links for HSD3BP5 Gene

GeneLoc Exon Structure for
HSD3BP5
ECgene alternative splicing isoforms for
HSD3BP5

Expression for HSD3BP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HSD3BP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of HSD3BP5 Gene:

HSD3BP5
genes like me logo Genes that share expression patterns with HSD3BP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HSD3BP5 Gene

Orthologs for HSD3BP5 Gene

Evolution for HSD3BP5 Gene

ENSEMBL:
Gene Tree for HSD3BP5 (if available)
TreeFam:
Gene Tree for HSD3BP5 (if available)

No data available for Orthologs for HSD3BP5 Gene

Paralogs for HSD3BP5 Gene

No data available for Paralogs for HSD3BP5 Gene

Variants for HSD3BP5 Gene

Additional Variant Information for HSD3BP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HSD3BP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HSD3BP5 Gene

Disorders for HSD3BP5 Gene

No disorders were found for HSD3BP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HSD3BP5 Gene

Publications for HSD3BP5 Gene

  1. Cloning, expression, and physical mapping of the 3beta-hydroxysteroid dehydrogenase gene cluster (HSD3BP1-HSD3BP5) in human. (PMID: 10552929) McBride MW … Sutcliffe RG (Genomics 1999) 2 3 58

Products for HSD3BP5 Gene

Sources for HSD3BP5 Gene

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