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Aliases for HSD17B7P2 Gene

Aliases for HSD17B7P2 Gene

  • Hydroxysteroid (17-Beta) Dehydrogenase 7 Pseudogene 2 2 3
  • 17beta-Hydroxysteroid Dehydrogenase Type 7 Form 2 3
  • BA291L22.1 3
  • Hsd17b_2 3
  • HSD17B7 3

External Ids for HSD17B7P2 Gene

Summaries for HSD17B7P2 Gene

GeneCards Summary for HSD17B7P2 Gene

HSD17B7P2 (Hydroxysteroid (17-Beta) Dehydrogenase 7 Pseudogene 2) is a Pseudogene. Among its related pathways are Metabolism and Metabolism.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSD17B7P2 Gene

Genomics for HSD17B7P2 Gene

Genomic Location for HSD17B7P2 Gene

Start:
38,356,380 bp from pter
End:
38,378,505 bp from pter
Size:
22,126 bases
Orientation:
Plus strand

Genomic View for HSD17B7P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HSD17B7P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSD17B7P2 Gene

Regulatory Elements for HSD17B7P2 Gene

Proteins for HSD17B7P2 Gene

Post-translational modifications for HSD17B7P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSD17B7P2 Gene

Domains for HSD17B7P2 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for HSD17B7P2 Gene

Function for HSD17B7P2 Gene

miRNA for HSD17B7P2 Gene

miRTarBase miRNAs that target HSD17B7P2

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for HSD17B7P2 Gene

Localization for HSD17B7P2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HSD17B7P2 Gene COMPARTMENTS Subcellular localization image for HSD17B7P2 gene
Compartment Confidence
mitochondrion 2
cytosol 1
extracellular 1
nucleus 1
peroxisome 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for HSD17B7P2 Gene

Pathways for HSD17B7P2 Gene

genes like me logo Genes that share pathways with HSD17B7P2: view

Interacting Proteins for HSD17B7P2 Gene

Gene Ontology (GO) - Biological Process for HSD17B7P2 Gene

None

Compounds for HSD17B7P2 Gene

(5) Novoseek inferred chemical compound relationships for HSD17B7P2 Gene

Compound -log(P) Hits PubMed IDs
zymosterol 91.9 1
17beta-hydroxysteroid 89.7 5
estradiol 53.5 1
sterol 52.5 3
cholesterol 40.8 4
genes like me logo Genes that share compounds with HSD17B7P2: view

Transcripts for HSD17B7P2 Gene

mRNA/cDNA for HSD17B7P2 Gene

Unigene Clusters for HSD17B7P2 Gene

Hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HSD17B7P2 Gene

No ASD Table

Relevant External Links for HSD17B7P2 Gene

GeneLoc Exon Structure for
HSD17B7P2
ECgene alternative splicing isoforms for
HSD17B7P2

Expression for HSD17B7P2 Gene

mRNA expression in normal human tissues for HSD17B7P2 Gene

SOURCE GeneReport for Unigene cluster for HSD17B7P2 Gene Hs.652484

genes like me logo Genes that share expressions with HSD17B7P2: view

Orthologs for HSD17B7P2 Gene

Evolution for HSD17B7P2 Gene

ENSEMBL:
Gene Tree for HSD17B7P2 (if available)
TreeFam:
Gene Tree for HSD17B7P2 (if available)

No data available for Orthologs for HSD17B7P2 Gene

Paralogs for HSD17B7P2 Gene

No data available for Paralogs for HSD17B7P2 Gene

Variants for HSD17B7P2 Gene

Sequence variations from dbSNP and Humsavar for HSD17B7P2 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs1060746 -- 38,359,923(+) GAAGA(C/T)GTTTG intron-variant
rs2064968 -- 38,362,947(-) tgtgt(C/G)tgtct intron-variant
rs2064969 -- 38,362,943(-) tctgt(C/G)tgtct intron-variant
rs2236265 -- 38,369,482(+) ATCAT(A/G)TAATT intron-variant
rs2257652 -- 38,367,388(+) CATGC(A/G)TGTAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for HSD17B7P2 Gene

Variant ID Type Subtype PubMed ID
nsv895030 CNV Loss 21882294
esv33710 CNV Loss 17666407
nsv895034 CNV Gain 21882294
nsv428230 CNV Loss 18775914

Relevant External Links for HSD17B7P2 Gene

HapMap Linkage Disequilibrium report
HSD17B7P2

Disorders for HSD17B7P2 Gene

No disorders were found for HSD17B7P2 Gene.

No data available for UniProtKB/Swiss-Prot for HSD17B7P2 Gene

Publications for HSD17B7P2 Gene

  1. Determination of cDNA, gene structure and chromosomal localization of the novel human 17beta-hydroxysteroid dehydrogenase type 7. (PMID: 10544267) Krazeisen A. … Adamski J. (FEBS Lett. 1999) 2 3 23
  2. Closing the gap: identification of human 3-ketosteroid reductase, the last unknown enzyme of mammalian cholesterol biosynthesis. (PMID: 12829805) Marijanovic Z. … Breitling R. (Mol. Endocrinol. 2003) 3 23
  3. Promoter analyses of human and mouse 17beta-hydroxysteroid dehydrogenase type 7. (PMID: 15862973) Ohnesorg T. … Adamski J. (J. Steroid Biochem. Mol. Biol. 2005) 23
  4. Transcriptional regulation of human and murine 17beta-hydroxysteroid dehydrogenase type-7 confers its participation in cholesterol biosynthesis. (PMID: 16901934) Ohnesorg T. … Adamski J. (J. Mol. Endocrinol. 2006) 23
  5. Depot-specific steroidogenic gene transcription in human adipose tissue. (PMID: 18410552) MacKenzie S.M. … Davies E. (Clin. Endocrinol. (Oxf) 2008) 23

Products for HSD17B7P2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HSD17B7P2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HSD17B7P2
    • Block miRNA regulation of HSD17B7P2 using miScript Target Protectors

    Sources for HSD17B7P2 Gene

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