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Aliases for HSD17B7P2 Gene

Aliases for HSD17B7P2 Gene

  • Hydroxysteroid (17-Beta) Dehydrogenase 7 Pseudogene 2 2 3
  • 17beta-Hydroxysteroid Dehydrogenase Type 7 Form 2 3
  • BA291L22.1 3
  • Hsd17b_2 3
  • HSD17B7 3

External Ids for HSD17B7P2 Gene

Previous GeneCards Identifiers for HSD17B7P2 Gene

  • GC10U900126
  • GC10P038686

Summaries for HSD17B7P2 Gene

GeneCards Summary for HSD17B7P2 Gene

HSD17B7P2 (Hydroxysteroid (17-Beta) Dehydrogenase 7 Pseudogene 2) is a Pseudogene. Among its related pathways are Metabolism and Metabolism.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HSD17B7P2 Gene

Genomics for HSD17B7P2 Gene

Regulatory Elements for HSD17B7P2 Gene

Genomic Location for HSD17B7P2 Gene

Start:
38,356,380 bp from pter
End:
38,378,505 bp from pter
Size:
22,126 bases
Orientation:
Plus strand

Genomic View for HSD17B7P2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HSD17B7P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HSD17B7P2 Gene

Proteins for HSD17B7P2 Gene

Post-translational modifications for HSD17B7P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HSD17B7P2 Gene

Domains for HSD17B7P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HSD17B7P2 Gene

Function for HSD17B7P2 Gene

miRNA for HSD17B7P2 Gene

miRTarBase miRNAs that target HSD17B7P2

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for HSD17B7P2 Gene

Localization for HSD17B7P2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HSD17B7P2 Gene COMPARTMENTS Subcellular localization image for HSD17B7P2 gene
Compartment Confidence
mitochondrion 2
cytosol 1
extracellular 1
nucleus 1
peroxisome 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for HSD17B7P2 Gene

Pathways for HSD17B7P2 Gene

genes like me logo Genes that share pathways with HSD17B7P2: view

Interacting Proteins for HSD17B7P2 Gene

Gene Ontology (GO) - Biological Process for HSD17B7P2 Gene

None

Compounds for HSD17B7P2 Gene

(5) Novoseek inferred chemical compound relationships for HSD17B7P2 Gene

Compound -log(P) Hits PubMed IDs
zymosterol 91.9 1
17beta-hydroxysteroid 89.7 5
estradiol 53.5 1
sterol 52.5 3
cholesterol 40.8 4
genes like me logo Genes that share compounds with HSD17B7P2: view

Transcripts for HSD17B7P2 Gene

mRNA/cDNA for HSD17B7P2 Gene

Unigene Clusters for HSD17B7P2 Gene

Hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HSD17B7P2
    • Block miRNA regulation of HSD17B7P2 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for HSD17B7P2

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for HSD17B7P2 Gene

    No ASD Table

    Relevant External Links for HSD17B7P2 Gene

    GeneLoc Exon Structure for
    HSD17B7P2
    ECgene alternative splicing isoforms for
    HSD17B7P2

    Expression for HSD17B7P2 Gene

    mRNA expression in normal human tissues for HSD17B7P2 Gene

    SOURCE GeneReport for Unigene cluster for HSD17B7P2 Gene Hs.652484

    genes like me logo Genes that share expressions with HSD17B7P2: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for HSD17B7P2 Gene

    Orthologs for HSD17B7P2 Gene

    Evolution for HSD17B7P2 Gene

    ENSEMBL:
    Gene Tree for HSD17B7P2 (if available)
    TreeFam:
    Gene Tree for HSD17B7P2 (if available)

    No data available for Orthologs for HSD17B7P2 Gene

    Paralogs for HSD17B7P2 Gene

    No data available for Paralogs for HSD17B7P2 Gene

    Variants for HSD17B7P2 Gene

    Sequence variations from dbSNP and Humsavar for HSD17B7P2 Gene

    SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
    rs1060746 -- 38,359,923(+) GAAGA(C/T)GTTTG intron-variant
    rs2064968 -- 38,362,947(-) tgtgt(C/G)tgtct intron-variant
    rs2064969 -- 38,362,943(-) tctgt(C/G)tgtct intron-variant
    rs2236265 -- 38,369,482(+) ATCAT(A/G)TAATT intron-variant
    rs2257652 -- 38,367,388(+) CATGC(A/G)TGTAC intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for HSD17B7P2 Gene

    Variant ID Type Subtype PubMed ID
    nsv895030 CNV Loss 21882294
    esv33710 CNV Loss 17666407
    nsv895034 CNV Gain 21882294
    nsv428230 CNV Loss 18775914

    Relevant External Links for HSD17B7P2 Gene

    HapMap Linkage Disequilibrium report
    HSD17B7P2

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HSD17B7P2 Gene

    Disorders for HSD17B7P2 Gene

    No disorders were found for HSD17B7P2 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for HSD17B7P2 Gene

    Publications for HSD17B7P2 Gene

    1. Determination of cDNA, gene structure and chromosomal localization of the novel human 17beta-hydroxysteroid dehydrogenase type 7. (PMID: 10544267) Krazeisen A. … Adamski J. (FEBS Lett. 1999) 2 3 23
    2. Closing the gap: identification of human 3-ketosteroid reductase, the last unknown enzyme of mammalian cholesterol biosynthesis. (PMID: 12829805) Marijanovic Z. … Breitling R. (Mol. Endocrinol. 2003) 3 23
    3. Promoter analyses of human and mouse 17beta-hydroxysteroid dehydrogenase type 7. (PMID: 15862973) Ohnesorg T. … Adamski J. (J. Steroid Biochem. Mol. Biol. 2005) 23
    4. Transcriptional regulation of human and murine 17beta-hydroxysteroid dehydrogenase type-7 confers its participation in cholesterol biosynthesis. (PMID: 16901934) Ohnesorg T. … Adamski J. (J. Mol. Endocrinol. 2006) 23
    5. Depot-specific steroidogenic gene transcription in human adipose tissue. (PMID: 18410552) MacKenzie S.M. … Davies E. (Clin. Endocrinol. (Oxf) 2008) 23

    Products for HSD17B7P2 Gene

    Sources for HSD17B7P2 Gene

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