HS3ST3A1 Gene
protein-coding GIFtS : 59
GCID: GC17 M013339
heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Aliasesfor HS3ST3A1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Heparan Sulfate (Glucosamine) 3-O-Sulfotransferase 3A1 1 2 H3-OST-3A1 3OST3A11 2 3 Heparan Sulfate Glucosamine 3-O-Sulfotransferase 3A12 30ST3A11 2 5 Heparin-Glucosamine 3-O-Sulfotransferase2 Heparan Sulfate 3-O-Sulfotransferase 3A12 3 EC 2.8.2.303 Heparan Sulfate D-Glucosaminyl 3-O-Sulfotransferase 3A12 3 HS3ST3A3 3-OST-3A2 3 EC 2.8.28
Export aliases for HS3ST3A1 gene to outside databases Previous GC identifers: GC17M013765 GC17M014513 GC17M013342 GC17M013599
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Summariesfor HS3ST3A1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for HS3ST3A1 : Heparan sulfate biosynthetic enzymes are key components in generating a myriad of distinct heparan sulfate fine structures that carry out multiple biologic activities. The enzyme encoded by this gene is a member of the heparan sulfate biosynthetic enzyme family. It is a type II integral membrane protein and possesses heparan sulfate glucosaminyl 3-O-sulfotransferase activity. The sulfotransferase domain of this enzyme is highly similar to the same domain of heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3A1, and these two enzymes sulfate an identical disaccharide. This gene is widely expressed, with the most abundant expression in liver and placenta. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: HS3SA_HUMAN, Q9Y663 Function : Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfogroup to an N-unsubstituted glucosamine linked to a 2-O-sulfo iduronic acid unit on heparan sulfate. Catalyzes the O-sulfation of glucosamine in IdoUA2S-GlcNS and also in IdoUA2S-GlcNH2. The substrate-specific O-sulfation generates an enzyme-modified heparan sulfate which acts as a binding receptor to Herpes simplex virus-1 (HSV-1) and permits its entry. Unlike 3-OST-1, does not convert non-anticoagulant heparan sulfate to anticoagulant heparan sulfate Gene Wiki entry for HS3ST3A1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Viewsfor HS3ST3A1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000017.10 NC_018928.1 NT_010718.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the HS3ST3A1 gene promoter: COUP-TF1 GATA-3 COUP CUTL1 HNF-4alpha1 C/EBPalpha GATA-1 GATA-2 COUP-TF Pax-4a Other transcription factors Search SABiosciences Chromatin IP Primers for HS3ST3A1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat HS3ST3A1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 17p12 Ensembl cytogenetic band: 17p12 HGNC cytogenetic band: 17p12 HS3ST3A1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17M013339: view genomic region
(about GC identifiers )
Start:
13,399,006 bp from pter
End:
13,505,244 bp from pter
Size:
106,239 bases
Orientation:
minus strand
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Proteinsfor HS3ST3A1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: HS3SA_HUMAN, Q9Y663 (See
protein sequence )Recommended Name: Heparan sulfate glucosamine 3-O-sulfotransferase 3A1 Size : 406 amino acids; 44900 Da
Subcellular location : Golgi apparatus membrane; Single-pass type II membrane protein (Probable)
2 PDB 3D structures from and Proteopedia for HS3ST3A1 :1T8T (3D)
  1T8U (3D)
 
Secondary accessions : A8K7N2Explore the universe of human proteins at neXtProt for HS3ST3A1: NX_Q9Y663 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q9Y663 4/6 DME Specific Peptides for HS3ST3A1 (Q9Y663 ) (see all 6 )HS3ST3A1 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_006033.1 ENSEMBL proteins: ENSP00000284110 ENSP00000462696 Reactome Protein details: Q9Y663 Human Recombinant Protein Products: Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000139 Golgi membrane
TAS -- GO:0016021 integral to membrane
IEA --
HS3ST3A1 for ontologies About GeneDecksing HS3ST3A1 Antibody Products: Assay Products for HS3ST3A1:
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Protein
Domains / Familiesfor HS3ST3A1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
HS3ST3A1 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q9Y663 ProtoNet protein and cluster: Q9Y663
UniProtKB/Swiss-Prot: HS3SA_HUMAN, Q9Y663 Similarity : Belongs to the sulfotransferase 1 family
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Functionfor HS3ST3A1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: HS3SA_HUMAN, Q9Y663 Function : Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfogroup to an N-unsubstituted glucosamine linked to a 2-O-sulfo iduronic acid unit on heparan sulfate. Catalyzes the O-sulfation of glucosamine in IdoUA2S-GlcNS and also in IdoUA2S-GlcNH2. The substrate-specific O-sulfation generates an enzyme-modified heparan sulfate which acts as a binding receptor to Herpes simplex virus-1 (HSV-1) and permits its entry. Unlike 3-OST-1, does not convert non-anticoagulant heparan sulfate to anticoagulant heparan sulfate Catalytic activity : 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate +[heparan sulfate]-glucosamine 3-sulfate
Genatlas biochemistry entry for HS3ST3A1 : heparan sulfate D-glucosamine 3-O-sulfotransferase 3A1,widely expressed with multiple transcripts active according to the saccharide structures around the GLN residue,putative regulator of heparan sulfate proteoglycan properties Enzyme Numbers (IUBMB): EC 2.8.2 2 EC 2.8.2.30 1 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for HS3ST3A1 (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for HS3ST3A1OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: HS3ST3A1 (NM_006042 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for HS3ST3A1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat HS3ST3A1
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HS3ST3A1
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0008146 sulfotransferase activity
TAS 9988767 GO:0033872 [heparan sulfate]-glucosamine 3-sulfotransferase 3 activity
IEA --
HS3ST3A1 for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for HS3ST3A1 :
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Pathways & Interactionsfor HS3ST3A1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 MPS IIIC - Sanfilippo syndrome C 2 heparan sulfate biosynthesis 3 Disease 4 Metabolism 5 Biological oxidations
Pathway sources See GeneCards unified pathways Show all pathways 3 BioSystems Pathways for HS3ST3A1 5/18
Reactome Pathways for HS3ST3A1 (see all 18 )1
Kegg Pathway (Kegg details for HS3ST3A1) :
HS3ST3A1 for pathways About GeneDecksing Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for HS3ST3A1 STRING Interaction
Network Preview (showing 5 interactants - click image to see 20)5/20 Interacting proteins for HS3ST3A1 (ENSP00000284110 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 20 )About this table Gene Ontology (GO): 4 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005975 carbohydrate metabolic process
TAS -- GO:0006024 glycosaminoglycan biosynthetic process
TAS -- GO:0030203 glycosaminoglycan metabolic process
TAS -- GO:0044281 small molecule metabolic process
TAS --
HS3ST3A1 for ontologies About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Drugs & Compoundsfor HS3ST3A1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for HS3ST3A1 3 HMDB Compounds for HS3ST3A1 About this table 5 DrugBank Compounds for HS3ST3A1 About this table Search CenterWatch for drugs/clinical trials and news about HS3ST3A1 / HS3SA
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Transcriptsfor HS3ST3A1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for HS3ST3A1 gene: NM_006042.1 Unigene Cluster for HS3ST3A1:
Heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 Hs.462270 [show with all ESTs ] Unigene Representative Sequence: NM_006042 2 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000284110 (uc002gob.1 ) ENST00000578576 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for HS3ST3A1 (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for HS3ST3A1OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: HS3ST3A1 (NM_006042 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for HS3ST3A1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat HS3ST3A1
Additional cDNA sequence: AF105376.1 AK292047.1 AY358838.1 BC044647.1
5 DOTS entries : DT.305484 DT.95233849
DT.97825581 DT.99956000 DT.95191728 24/39 AceView cDNA sequences (see all 39 ):
BU619124 AU104945 BE205796 AW239403 BC044647 AY358838 CA419677 AF105376 BQ000891 CF529176 CB988412 BU557404 CB961814 CA442784 AI014841 CF593712 N59438 NM_006042 CB988186 BQ011460 BX103399 BU161930 AU099264 CA444092 GeneLoc Exon Structure
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Expression for HS3ST3A1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section HS3ST3A1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TCCAAGGACA
About this image HS3ST3A1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See HS3ST3A1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for HS3ST3A1 SOURCE GeneReport for Unigene cluster: Hs.462270 UniProtKB/Swiss-Prot: HS3SA_HUMAN, Q9Y663 Tissue specificity : Ubiquitous. Most abundant in heart and placenta, followed by liver and kidney SABiosciences Custom PCR Arrays for HS3ST3A1 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for HS3ST3A1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat HS3ST3A1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat HS3ST3A1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat HS3ST3A1 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HS3ST3A1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Orthologsfor HS3ST3A1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for HS3ST3A1 gene from 5/18 species (see all 18 ) About this table
ENSEMBL Gene Tree for HS3ST3A1 (if available)TreeFam Gene Tree for HS3ST3A1 (if available)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Paralogsfor HS3ST3A1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for HS3ST3A1 gene HS3ST2 2 HS3ST1 2 NDST2 2 HS3ST3B1 2 HS3ST4 2 HS3ST6 2 HS3ST5 2 NDST1 2 NDST4 2 NDST3 2 7 SIMAP similar genes for HS3ST3A1 using alignment to 2 protein entries: HS3SA_HUMAN (see all proteins ):HS3ST3B1 HS3ST4 HS3ST2 HS3ST6 HS3ST1 HS3ST5 NDST2
HS3ST3A1 for paralogs About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Variantsfor HS3ST3A1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 17 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for HS3ST3A1 (13399006 - 13505244 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 4 variations for HS3ST3A1 3 CNVs : 2218 0798 47929 1 Indel : 11874
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing HS3ST3A1
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Disorders
/ Diseasesfor HS3ST3A1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
HS3ST3A1 for disorders About GeneDecksing
OMIM gene information: 604057
OMIM disorders : --3 diseases for HS3ST3A1 : About MalaCards recurrent respiratory papillomatosis herpes simplex scoliosis Human Genome Epidemiology (HuGE) Navigator: HS3ST3A1 (2 documents) Export disorders for HS3ST3A1 gene to outside databases
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Publicationsfor HS3ST3A1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for HS3ST3A1 gene, integrated from 9 sources (see all 17 ): (articles sorted by number of sources associating them with HS3ST3A1) Utopia : connect your pdf to the dynamic world of online information
Multiple isoforms of heparan sulfate D-glucosaminyl 3-O- sulfotransferase. Isolation, characterization, and expression of human cDNAs and identification of distinct genomic loci. (PubMed id 9988767) 1 , 2 , 3 Shworak N.W.... Rosenberg R.D. (1999) Structural analysis of the sulfotransferase (3-o-sulfotransferase isoform 3) involved in the biosynthesis of an entry receptor for herpes simplex virus 1. (PubMed id 15304505) 1 , 2 Moon A.F.... Pedersen L.C. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309) 1 , 2 Clark H.F.... Gray A.M. (2003) Expression of heparan sulfate D-glucosaminyl 3-O-sulfotransferase isoforms reveals novel substrate specificities. (PubMed id 9988768) 1 , 2 Liu J.... Rosenberg R.D. (1999) Heparan sulfate D-glucosaminyl 3-O-sulfotransferase-3A sulfates N- unsubstituted glucosamine residues. (PubMed id 10608887) 1 , 2 Liu J....Rosenberg R.D. (1999) A novel role for 3-O-sulfated heparan sulfate in herpes simplex virus 1 entry. (PubMed id 10520990) 1 , 2 Shukla D.... Spear P.G. (1999) Genetic variations in genes involved in heparan sulpha te biosynthesis are associated with Plasmodium falciparum parasitaemia: a famili al study in Burkina Faso. (PubMed id 22475533) 1 Atkinson A....Rihet P. (2012) A whole genome association study of mother-to-child t ransmission of HIV in Malawi. (PubMed id 20487506) 1 Joubert B.R....Meshnick S.R. (2010) Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PubMed id 17903302) 1 Levy D....Mitchell G.F. (2007)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
External Searches for HS3ST3A1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genome Databases showing HS3ST3A1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Other Databases showing HS3ST3A1 gene
(According to HUGE )
About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Specialized Databases showing HS3ST3A1 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for HS3ST3A1 Pharmacogenomics, SNPs, Pathways GGDB http://riodb.ibase.aist.go.jp/rcmg/ggdb/
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
About This Section Patent Information for HS3ST3A1 gene: Search GeneIP for patents involving HS3ST3A1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Productsfor HS3ST3A1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for HS3ST3A1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for HS3ST3A1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for HS3ST3A1 Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for HS3ST3A1 OriGene 3'-UTR Clone for HS3ST3A1 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for HS3ST3A1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for HS3ST3A1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for HS3ST3A1 OriGene Custom Protein Services for HS3ST3A1 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat HS3ST3A1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing HS3ST3A1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat HS3ST3A1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat HS3ST3A1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat HS3ST3A1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat HS3ST3A1
HS3ST3A1 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HS3ST3A1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat HS3ST3A1
Jump to Section...
Aliases for HS3ST3A1
Databases for HS3ST3A1
Disorders / Diseases for HS3ST3A1
Domains / Families for HS3ST3A1
Drugs / Compounds for HS3ST3A1
Expression for HS3ST3A1
Function for HS3ST3A1
Genomic Views for HS3ST3A1
Intellectual Property for HS3ST3A1
Orthologs for HS3ST3A1
Paralogs for HS3ST3A1
Pathways / Interactions for HS3ST3A1
Products for HS3ST3A1
Proteins for HS3ST3A1
Publications for HS3ST3A1
Search Box for HS3ST3A1
Summaries for HS3ST3A1
Transcripts for HS3ST3A1
Variants for HS3ST3A1
TOP
BOTTOM