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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HRH3 Gene

protein-coding   GIFtS: 63
GCID: GC20M060790

histamine receptor H3

 Explore 24 diseases affiliated with
HRH3 via our new
 Human Malady Compendium 
Biological research products
for HRH3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Histamine Receptor H31 2     G-Protein Coupled Receptor 972 3
GPCR971 2 3     G Protein-Coupled Receptor 972
H3R2 3     Histamine H3 Receptor2
HH3R2 3     

External Ids:    HGNC: 51841   Entrez Gene: 112552   Ensembl: ENSG000001011807   OMIM: 6045255   UniProtKB: Q9Y5N13   

Export aliases for HRH3 gene to outside databases

Previous GC identifers: GC20M060553 GC20M061428 GC20M061475 GC20M060223 GC20M057566


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HRH3:
Histamine is a ubiquitous messenger molecule released from mast cells, enterochromaffin-like cells, and neurons. Its
various actions are mediated by histamine receptors H1, H2, H3 and H4. This gene encodes one of the histamine
receptors (H3) which belongs to the family 1 of G protein-coupled receptors. It is an integral membrane protein and
can regulate neurotransmitter release. This receptor can also increase voltage-dependent calcium current in smooth
muscles and innervates the blood vessels and the heart in cardiovascular system. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: HRH3_HUMAN, Q9Y5N1
Function: The H3 subclass of histamine receptors could mediate the histamine signals in CNS and peripheral nervous
system. Signals through the inhibition of adenylate cyclase and displays high constitutive activity (spontaneous
activity in the absence of agonist). Agonist stimulation of isoform 3 neither modified adenylate cyclase activity nor
induced intracellular calcium mobilization

summary for HRH3:
Histamine H3 receptors are Galphai/o-protein-coupled receptors first cloned in 1999. H3 receptors are
expressed at high levels on histaminergic neurons in the central nervous system, particularly in the basal
ganglia, cortex, hippocampus and strial area. They are expressed in the periphery at lower densities in the
gastrointestinal, bronchial and cardiovascular systems. H3 receptors are thought to function as presynaptic
autoreceptors, and activation stimulates the negative feedback mechanism that reduces central histaminergic
activity. These receptors have displayed heterogeneity in binding and functional studies, suggesting
multiple subtypes. In rats, three H3 receptor subtypes have been indentified and they all vary in the length
of the third extracellular loop, have distinct CNS localization and differentially couple to adenylyl
cyclase and MAPK signaling pathways. H3 receptors have multiple functions including roles in cognition,
sleep-wake status, energy homeostasis regulation and inflammation. Activation of these receptors can inhibit
histamine, dopamine, serotonin, noradrenalin and acetylcholine release and they participate in control of
neurogenic inflammation through local-neuron feedback loops. Furthermore, H3 receptor activation increases
antigen-presenting cell capacity. H3 receptors are thought to have pathophysiological relevance and are
involved in cognitive impairment, seizures and possibly metabolic syndrome. The human gene encoding this
receptor is localized to chromosome 20q13.33.

Gene Wiki entry for HRH3 (Histamine H3 receptor)


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000020.10  NC_018931.1  NT_011362.10  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HRH3 gene promoter:
         ER-alpha   USF1   Spz1   HTF   Olf-1   C/EBPalpha   Arnt   CBF-A   USF-1   CBF(2)   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidHRH3 promoter sequence
   Search SABiosciences Chromatin IP Primers for HRH3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HRH3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 20q13.33   Ensembl cytogenetic band:  20q13.33   HGNC cytogenetic band: 20pter-p12.1

HRH3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HRH3 gene location

GeneLoc information about chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20M060790:  view genomic region     (about GC identifiers)

Start:
60,790,017 bp from pter      End:
60,795,323 bp from pter
Size:
5,307 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HRH3_HUMAN, Q9Y5N1 (See protein sequence)
Recommended Name: Histamine H3 receptor  
Size: 445 amino acids; 48671 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Miscellaneous: Does not bind to cimetidine and tripolidine. Shows modest affinity for thioperamide, imetit,
N-alpha-methylhistamine and R(-)-alpha-methylhistamine. Isoform 4 is unable to bind to iodoproxyfan while isoforms 1
and 3 bind it with high affinity
Secondary accessions: Q4QRI7 Q9GZX2 Q9H4K8
Alternative splicing: 7 isoforms:  Q9Y5N1-1   Q9Y5N1-2   Q9Y5N1-3   Q9Y5N1-4   Q9Y5N1-5   Q9Y5N1-6   Q9Y5N1-7   

Explore the universe of human proteins at neXtProt for HRH3: NX_Q9Y5N1

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9Y5N1

  • HRH3 Protein expression data from MOPED and PaxDb:    About this image 
    HRH3 Protein Expression
    REFSEQ proteins: NP_009163.2  
    ENSEMBL proteins: 
     ENSP00000342560   ENSP00000321482  
    Reactome Protein details: Q9Y5N1
    Human Recombinant Protein Products for HRH3: 
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    Uscn Proteins for HRH3

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane TAS10347254

    HRH3 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for HRH3


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HRH3 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR017452 GPCR_Rhodpsn_7TM
     IPR003980 Histamine_H3_rcpt
     IPR000276 GPCR_Rhodpsn

    Graphical View of Domain Structure for InterPro Entry Q9Y5N1

    ProtoNet protein and cluster: Q9Y5N1

    1 Blocks protein family: IPB003980 Histamine H3 receptor signature

    UniProtKB/Swiss-Prot: HRH3_HUMAN, Q9Y5N1
    Similarity: Belongs to the G-protein coupled receptor 1 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: HRH3_HUMAN, Q9Y5N1
    Function: The H3 subclass of histamine receptors could mediate the histamine signals in CNS and peripheral nervous
    system. Signals through the inhibition of adenylate cyclase and displays high constitutive activity (spontaneous
    activity in the absence of agonist). Agonist stimulation of isoform 3 neither modified adenylate cyclase activity nor
    induced intracellular calcium mobilization

         Gene Ontology (GO): 1 molecular function term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004969histamine receptor activity IEA--
         
    HRH3 for ontologies           About GeneDecksing


    Phenotypes:
         7 MGI mutant phenotypes (inferred from 3 alleles(MGI details for Hrh3):
     adipose tissue  behavior/neurological  cardiovascular system  growth/size  homeostasis/metabolism 
     immune system  nervous system 

    HRH3 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for HRH3: Hrh3tm1Kot Hrh3tm1Twl Hrh3tm1.1Jhwa
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for HRH3 

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    hsa-miR-3678-3p hsa-miR-1321 hsa-miR-29a hsa-miR-29c hsa-miR-765 hsa-miR-570 hsa-miR-298 hsa-miR-192*
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HRH3


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Class A/1 (Rhodopsin-like receptors)
    Class A/1 (Rhodopsin-like receptors)1.00
    GPCRs, Class A Rhodopsin-like0.41
    GPCR ligand binding0.75
    Neuroactive ligand-receptor interaction0.38
    G alpha (i) signalling events0.44
    2Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    3Histamine receptors
    Histamine receptors1.00
    4Monoamine Transport
    Monoamine Transport1.00
    5Monoamine GPCRs
    Amine ligand-binding receptors0.79

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2 BioSystems Pathways for HRH3 
        Monoamine Transport
    GPCRs, Class A Rhodopsin-like

    5/8        Reactome Pathways for HRH3 (see all 8)
        GPCR downstream signaling
    Signaling by GPCR
    GPCR ligand binding
    Class A/1 (Rhodopsin-like receptors)
    Signal Transduction


    1         Kegg Pathway  (Kegg details for HRH3):
        Neuroactive ligand-receptor interaction


    HRH3 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for HRH3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/144 Interacting proteins for HRH3 (Q9Y5N13 ENSP000003425604) via UniProtKB, MINT, STRING, and/or I2D (see all 144)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    DRD1P217283, ENSP000003276524I2D: score=1 STRING: ENSP00000327652
    ADCY2ENSP000003429524STRING: ENSP00000342952
    ADCY4ENSP000003121264STRING: ENSP00000312126
    ADCY8ENSP000002863554STRING: ENSP00000286355
    ADORA1ENSP000003085494STRING: ENSP00000308549
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007187G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger TAS10347254
    GO:0007269neurotransmitter secretion TAS10347254

    HRH3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    HRH3 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Compounds for HRH3 available from Tocris Bioscience    About this table
    CompoundAction CAS #
    Immethridine dihydrobromide Potent H3 agonist, highly selective over H4 [87976-03-2]
    VUF 5681 dihydrobromidePotent H3 receptor silent antagonist--
    GT 2016Selective H3 antagonist[152241-24-2]
    JNJ 5207852 dihydrochlorideHigh affinity H3 receptor antagonist[398473-34-2]
    (R)-(-)-alpha-Methylhistamine dihydrobromide Potent, standard H3 agonist [75614-87-8]

    2 HMDB Compounds for HRH3    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    Histamine1H-Imidazole-4-ethanamine (see all 27)51-45-6--

    2 DrugBank Compounds for HRH3    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Histamine Phosphate-- 51-74-1targetagonist17652997 16715497 17575572 16599255
    Betahistine-- 5638-76-6targetantagonist18447604 11700150 20530654

    10/28 Novoseek chemical compound relationships for HRH3 gene (see all 28)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    thioperamide 94.4 9 8564266 (2), 9640366 (1), 9455995 (1), 15544557 (1) (see all 7)
    imetit 93.6 3 9865516 (1), 9455995 (1), 16532454 (1)
    clobenpropit 89.3 2 14729385 (1), 15997873 (1)
    immepip 86.6 5 16297617 (2), 9185835 (1), 16532454 (1), 8308858 (1)
    histamine 86.4 98 7867658 (3), 9699219 (3), 8448069 (2), 10516658 (2) (see all 69)
    alpha methylhistamine 86.1 2 7698611 (1), 9793613 (1)
    iodophenpropit 79.8 7 8564266 (3)
    tele-methylhistamine 75.5 3 10755377 (1), 12971961 (1)
    chlorpheniramine 68.7 2 9455995 (1), 8809785 (1)
    mepyramine 65.5 1 8564521 (1)

    Search CenterWatch for drugs/clinical trials and news about HRH3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HRH3 gene: 
    NM_007232.2  

    Unigene Cluster for HRH3:

    Histamine receptor H3
    Hs.251399  [show with all ESTs]
    Unigene Representative Sequence: AF140538
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000340177(uc002ycf.2) ENST00000317393(uc002ych.3 uc002ycg.3 uc002yci.3)


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    hsa-miR-3678-3p hsa-miR-1321 hsa-miR-29a hsa-miR-29c hsa-miR-765 hsa-miR-570 hsa-miR-298 hsa-miR-192*
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    Additional cDNA sequence: 

    AB019000.1 AF140538.1 AF321910.1 AF321911.1 AF321912.1 AF321913.1 AF346903.1 AF346904.1 
    AF363791.1 AK074730.1 BC096840.1 

    4 DOTS entries:

    DT.100750130  DT.438395  DT.100020634  DT.91731029 

    23 AceView cDNA sequences:

    AF363791 AB019000 CB154982 BQ068856 NM_007232 BM548665 BF531112 AK074730 
    AF321910 AF321913 BX089742 AF140538 AF346904 AF321911 AF346903 CF147822 
    AF321912 AB045369 H30846 BE783826 R87218 R87217 H28163 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for HRH3    About this scheme

    ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b
    SP1:        -                                 
    SP2:        -                       -         
    SP3:        -                                 
    SP4:                                          


    ECgene alternative splicing isoforms for HRH3

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HRH3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTCCTCTGCC
    HRH3 Expression
    About this image
    See HRH3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HRH3

    SOURCE GeneReport for Unigene cluster: Hs.251399

    UniProtKB/Swiss-Prot: HRH3_HUMAN, Q9Y5N1
    Tissue specificity: Expressed predominantly in the CNS, with the greatest expression in the thalamus and caudate
    nucleus. The various isoforms are mainly coexpressed in brain, but their relative expression level varies in a
    region-specific manner. Isoform 3 and isoform 7 are highly expressed in the thalamus, caudate nucleus and cerebellum
    while isoform 5 and isoform 6 show a poor expression. Isoform 5 and isoform 6 show a high expression in the amygdala,
    substantia nigra, cerebral cortex and hypothalamus. Isoform 7 is not found in hypothalamus or substantia nigra

        SABiosciences Expression via Pathway-Focused PCR Array including HRH3: 
              G Protein Coupled Receptors 384HT in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for HRH3 gene from 5/13 species (see all 13)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Hrh31 , 5 histamine receptor H31, 5 88.96(n)1
    94.59(a)1
      2 (102.62 cM)5
    992961  NM_133849.21  NP_598610.11 
     1800994655 
    chicken
    (Gallus gallus)
    Aves HRH31 histamine receptor H3 69.98(n)
    73.85(a)
      428147  XM_425705.2  XP_425705.2 
    lizard
    (Anolis carolinensis)
    Reptilia HRH36
    --
    66(a)
    1 ↔ 1
    4(150769383-150800052)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.42532 Transcribed sequence with moderate similarity to protein more 74.05(n)    AL848045.2 
    zebrafish
    (Danio rerio)
    Actinopterygii LOC1003310771 histamine H3 receptor-like 66.77(n)
    63.47(a)
      100331077  XM_002667471.1  XP_002667517.1 


    ENSEMBL Gene Tree for HRH3 (if available)
    TreeFam Gene Tree for HRH3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for HRH3 gene
    HRH42  CHRM52  HRH12  CHRM12  CHRM22  CHRM42  CHRM32  
    18/19 SIMAP similar genes for HRH3 using alignment to 7 protein entries:     HRH3_HUMAN (see all proteins) (see all similar genes):
    DRD2    ADRA1A    CHRM5    H4    HTR7    ADRB2
    DRD1    HRH4    DRD3    CHRM3    CHRM1    ADRA2B
    CHRM2    HTR5A    CHRM4    ADRB1    ADRA2C    ADRB3

    HRH3 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for HRH3
    PGOHUM00000259137


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/233 NCBI SNPs in HRH3 are shown (see all 233    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 20 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1454625181,2
    --60789745(+) CAGAGC/TGGGCC 1 -- ds50010--------
    rs1893001221,2
    --60789867(+) TGGCAG/TGCTGG 1 -- ds50010--------
    rs17395851,2
    C,F,H--60790056(-) GCAAAC/ACGTGA 1 -- ut31 ese39Minor allele frequency- A:0.02MN NS NA WA 1180
    rs1821411441,2
    C--60790105(+) GCGCGC/TGGCAC 1 -- ut310--------
    rs2007918101,2
    C,F--60790460(+) TCATCT/CTTCTG 1 -- ut311Minor allele frequency- C:0.01EU 593
    rs1873846411,2
    C--60790626(+) TTGTCC/TGGGGA 1 -- ut310--------
    rs1892413741,2
    C--60790644(+) GGTGTA/GCAGGT 1 -- ut310--------
    rs1815509291,2
    C--60790982(+) CGAGCC/TGGGTA 1 -- ut310--------
    rs1999810871,2
    --60791138(+) AGGCCC/TGGCGG 2 Q R mis10--------
    rs20674761,2
    C,F--60791185(-) AACTCG/AGCTGT 2 /S syn1 ese32Minor allele frequency- A:0.00NA EU 5621

    HapMap Linkage Disequilibrium report for HRH3 (60790017 - 60795323 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for HRH3
         2 CNVs: 5347 30129
    Human Gene Mutation Database (HGMD): HRH3

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HRH3 for disorders           About GeneDecksing

    OMIM gene information: 604525    OMIM disorders: --

    20/24 diseases for HRH3 (see all 24):    About MalaCards
    attention deficit hyperactivity disorder    seizures    neuronitis    sleep disorder
    chorea    brain disease    hepatic coma    parkinson's disease
    migraine    alzheimer's disease    dementia    ischemia
    asthma    obesity    pertussis    pancreatic carcinoma
    schizophrenia    cholangiocarcinoma    pancreatitis    hepatitis

    2 diseases from the University of Copenhagen DISEASES database for HRH3:
    Attention deficit hyperactivity disorder     Schizophrenia

    10/16 Novoseek disease relationships for HRH3 gene (see all 16)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    cognitive disorder 68 6 18469850 (1), 19429511 (1), 15608078 (1), 16565470 (1) (see all 6)
    cns diseases 40.5 3 14529362 (1), 19429511 (1), 19222483 (1)
    attention-deficit hyperactivity disorder 36.7 1 15219708 (1)
    schizophrenia 35.7 6 19413576 (3), 15608077 (1), 15219708 (1), 16364652 (1)
    catalepsy 25.1 1 15910772 (1)
    alzheimers disease 23.9 5 19222483 (2), 15219708 (1), 17327487 (1), 10511950 (1)
    migraine 21.8 1 18942262 (1)
    parkinson disease 19 6 16532454 (3), 10051746 (1), 10511950 (1), 16738217 (1)
    brain diseases 18.8 2 17327487 (1), 19222483 (1)
    obesity 5.76 2 16565470 (1), 18221234 (1)

    Human Genome Epidemiology (HuGE) Navigator: HRH3 (6 documents)

    Export disorders for HRH3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HRH3 gene, integrated from 9 sources (see all 188):
    (articles sorted by number of sources associating them with HRH3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Cloning and functional expression of the human histamine H3 receptor. (PubMed id 10347254)1, 2, 3, 9 Lovenberg T.W.... Erlander M.G. (1999)
    2. Molecular cloning and characterization of a new human histamine receptor, HH4R. (PubMed id 11118334)1, 2, 9 Nakamura T.... Tanaka K. (2000)
    3. Structure of the human histamine H3 receptor gene (HRH3) and identification of naturally occurring variations. (PubMed id 11956964)1, 2, 9 Wiedemann P.... Bruess M. (2002)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. Genomic organization and characterization of splice variants of the human histamine H3 receptor. (PubMed id 11284713)1, 2 Coge F.... Galizzi J.-P. (2001)
    6. The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052)1, 2 Deloukas P....Rogers J. (2001)
    7. Altered histamine H3 receptor radioligand binding in post-mortem brain samples from subjects with psychiatric diseases. (PubMed id 19413576)1, 9 Jin C.Y....Panula P. (2009)
    8. Marked changes in signal transduction upon heteromerization of dopamine D1 and histamine H3 receptors. (PubMed id 19413572)1, 9 Ferrada C....Franco R. (2009)
    9. Histamine H3 receptors--general characterization and their function in the cardiovascular system. (PubMed id 9670104)1, 9 Malinowska B....Schlicker E. (1998)
    10. Molecular modeling of histamine H3 receptor and QSAR studies on arylbenzofuran derived H3 antagonists. (PubMed id 17561422)1, 9 Dastmalchi S....Hamzeiy H. (2008)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 11255 HGNC: 5184 AceView: HRH3 Ensembl:ENSG00000101180 euGenes: HUgn11255
    ECgene: HRH3 Kegg: 11255 H-InvDB: HRH3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HRH3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HRH3 gene:
    Search GeneIP for patents involving HRH3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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