HRAS Gene
protein-coding GIFtS : 76
GCID: GC11 M000522
v-Ha-ras Harvey rat sarcoma viral oncogene homolog (Previous symbol: HRAS1 )
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Aliasesfor HRAS gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases V-Ha-Ras Harvey Rat Sarcoma Viral Oncogene Homolog 1 2 N-RAS2 HRAS11 2 3 RASH12 Transforming Protein P212 3 C-Has/Bas P21 Protein2 H-Ras-12 3 C-Ras-Ki-2 Activated Oncogene2 P21ras1 GTP- And GDP-Binding Peptide B2 C-BAS/HAS2 GTPase HRas2 C-H-RAS2 Ha-Ras1 Proto-Oncoprotein2 C-HA-RAS12 P19 H-RasIDX Protein2 CTLO2 Ras Family Small GTP Binding Protein H-Ras2 H-RASIDX2 Transformation Gene: Oncogene HAMSV2 HAMSV2 Ha-Ras3 K-RAS2 C-H-Ras1
Export aliases for HRAS gene to outside databases Previous GC identifers: GC11P001100 GC11P001123 GC11P000664 GC11M000346
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Summariesfor HRAS gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for HRAS : This gene belongs to the Ras oncogene family, whose members are related to the transforming genes of mammalian sarcoma retroviruses. The products encoded by these genes function in signal transduction pathways. These proteins can bind GTP and GDP, and they have intrinsic GTPase activity. This protein undergoes a continuous cycle of de- and re-palmitoylation, which regulates its rapid exchange between the plasma membrane and the Golgi apparatus. Mutations in this gene cause Costello syndrome, a disease characterized by increased growth at the prenatal stage, growth deficiency at the postnatal stage, predisposition to tumor formation, mental retardation, skin and musculoskeletal abnormalities, distinctive facial appearance and cardiovascular abnormalities. Defects in this gene are implicated in a variety of cancers, including bladder cancer, follicular thyroid cancer, and oral squamous cell carcinoma. Multiple transcript variants, which encode different isoforms, have been identified for this gene. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: RASH_HUMAN, P01112 Function : Ras proteins bind GDP/GTP and possess intrinsic GTPase activityGene Wiki entry for HRAS
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Genomic Viewsfor HRAS gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000011.9 NC_018922.1 NT_009237.18 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the HRAS gene promoter: NF-1 NF-1/L STAT3 Other transcription factors Search SABiosciences Chromatin IP Primers for HRAS Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat HRAS
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 11p15.5 Ensembl cytogenetic band: 11p15.5 HGNC cytogenetic band: 11p15.5 HRAS Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11M000522: view genomic region
(about GC identifiers )
Start:
532,242 bp from pter
End:
537,287 bp from pter
Size:
5,046 bases
Orientation:
minus strand
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Proteinsfor HRAS gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: RASH_HUMAN, P01112 (See
protein sequence )Recommended Name: GTPase HRas precursor Size : 189 amino acids; 21298 Da
Subunit : In its GTP-bound form interacts with PLCE1. Interacts with TBC1D10C. Interacts with RGL3. Interacts withHSPD1. Found in a complex with at least BRAF, HRAS1, MAP2K1, MAPK3 and RGS14. Interacts (active GTP-bound form) with RGS14 (via RBD 1 domain) (By similarity). Forms a signaling complex with RASGRP1 and DGKZ. Interacts with RASSF5. Interacts with PDE6D. Interacts with IKZF3. Interacts with GNB2L1. Interacts with PIK3CG; the interaction is required for membrane recruitment and beta-gamma G protein dimer-dependent activation of the PI3K gamma complex PIK3CG:PIK3R6 (By similarity)
Subcellular location : Cell membrane. Cell membrane; Lipid-anchor; Cytoplasmic side. Golgi apparatus. Golgi apparatusmembrane; Lipid-anchor. Note=The active GTP-bound form is localized most strongly to membranes than the inactive GDP-bound form (By similarity). Shuttles between the plasma membrane and the Golgi apparatus
Subcellular location : Isoform 2: Nucleus. Cytoplasm. Cytoplasm, perinuclear region. Note=Colocalizes with GNB2L1 to theperinuclear region
Mass spectrometry : Mass=6223; Mass_error=2; Method=Electrospray; Range=112-166; Source=PubMed:9020151;
Mass spectrometry : Mass=6253; Mass_error=2; Method=Electrospray; Range=112-166; Note=Includes one nitric oxidemolecule; Source=PubMed:9020151;
6/113 PDB 3D structures from and Proteopedia for HRAS (see all 113 ):121P (3D)
  1AA9 (3D)
  1AGP (3D)
  1BKD (3D)
  1CLU (3D)
  1CRP (3D)
 
Secondary accessions : B5BUA0 Q14080 Q6FHV9 Q9BR65 Q9UCE2Alternative splicing : 2 isoforms : P01112-1 P01112-2 Explore the universe of human proteins at neXtProt for HRAS: NX_P01112 Post-translational modifications:
Palmitoylated by the ZDHHC9-GOLGA7 complex. A continuous cycle of de- and re-palmitoylation regulates rapid exchange between plasma membrane and Golgi1
S-nitrosylated; critical for redox regulation. Important for stimulating guanine nucleotide exchange. No structural perturbation on nitrosylation1
The covalent modification of cysteine by 15-deoxy-Delta12,14-prostaglandin-J2 is autocatalytic and reversible. It may occur as an alternative to other cysteine modifications, such as S-nitrosylation and S-palmitoylation1
Acetylation at Lys-104 prevents interaction with guanine nucleotide exchange factors (GEFs) (By similarity)1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P01112 HRAS Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (3 alternative transcripts):
NP_001123914.1 NP_005334.1 NP_789765.1 ENSEMBL proteins: ENSP00000380722 ENSP00000380723 ENSP00000434023 ENSP00000309845 ENSP00000407586 ENSP00000388246 Reactome Protein details: P01112 Human Recombinant Protein Products: Gene Ontology (GO): 5/10 cellular component terms (GO ID links to tree view) (see all 10 ): About this table
HRAS for ontologies About GeneDecksing HRAS Antibody Products: Assay Products for HRAS:
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Protein
Domains / Familiesfor HRAS gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
HRAS for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P01112 ProtoNet protein and cluster: P01112
2 Blocks protein families : IPB001806 Transforming protein P21 RAS signature IPB003577 Ras small GTPase UniProtKB/Swiss-Prot: RASH_HUMAN, P01112 Similarity : Belongs to the small GTPase superfamily. Ras family
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Functionfor HRAS gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: RASH_HUMAN, P01112 Function : Ras proteins bind GDP/GTP and possess intrinsic GTPase activityEnzyme regulation : Alternate between an inactive form bound to GDP and an active form bound to GTP. Activated by aguanine nucleotide-exchange factor (GEF) and inactivated by a GTPase-activating protein (GAP)
Genatlas biochemistry entry for HRAS : Harvey rat sarcoma viral (v-Ha-ras1) oncogene homolog Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for HRAS (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for HRAS (see all 4 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): HRAS (NM_005343 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for HRAS Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat HRAS
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HRAS
Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view) : About this table
HRAS for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for HRAS :Animal Models: Mouse knock-outs for HRAS: Hras1 tm1Mok Hras1 tm1Esn Hras1 tm1Grnt 15 MGI mutant phenotypes (inferred from 7 alleles ) (MGI details for Hras1) :
HRAS for phenotypes About GeneDecksing
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Pathways & Interactionsfor HRAS gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/154 super-pathways (see all 154 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Development_CNTF receptor signaling 2 Development HGF signaling pathway 3 SHC-mediated signalling 4 Signaling by FGFR 5 ErbB4 Pathway
Pathway sources See GeneCards unified pathways Show all pathways 5/84 EMD Millipore Pathways for HRAS (see all 84 )5/114 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for HRAS (see all 114 )5 Tocris Bioscience Pathways for HRAS 5/85 GeneGo (Thomson Reuters) Pathways for HRAS (see all 85 )5/40 BioSystems Pathways for HRAS (see all 40 ) 5/74
Reactome Pathways for HRAS (see all 74 )5 PharmGKB Pathways for HRAS 5/33
Kegg Pathways (Kegg details for HRAS) (see all 33 ):
HRAS for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HRAS STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/358 Interacting proteins for HRAS (P01112 1 , 2 , 3 ENSP00000309845 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 358 )Interactant Interaction Details GeneCard External ID(s) RAF1 P04049 1 , 2 , 3 , ENSP00000251849 4 EBI-350145,EBI-365996 MINT-6540149 MINT-60984 MINT-7295101 MINT-6802882 MINT-18357 MINT-17120 MINT-6946517 MINT-6540170 MINT-17119 I2D:
score=10 STRING: ENSP00000251849 RIN1 Q13671 1 , 2 , 3 , ENSP00000310406 4 EBI-350145,EBI-366017 MINT-59464 I2D:
score=6 STRING: ENSP00000310406 ABL2 P42684 2 , 3 , ENSP00000356595 4 MINT-59461 MINT-59462 I2D:
score=2 STRING: ENSP00000356595 PIK3CD O00329 1 , 3 , ENSP00000366563 4 EBI-350145,EBI-718309 I2D:
score=5 STRING: ENSP00000366563 RASSF5 Q8WWW0 2 , 3 , ENSP00000347443 4 MINT-6948699 I2D:
score=5 STRING: ENSP00000347443
About this table Gene Ontology (GO): 5/54 biological process terms (GO ID links to tree view) (see all 54 ): About this table
HRAS for ontologies About GeneDecksing
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Drugs & Compoundsfor HRAS gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
HRAS for compounds About GeneDecksing Browse Tocris compounds for HRAS 3 HMDB Compounds for HRAS About this table 5 DrugBank Compounds for HRAS About this table 10/90 Novoseek chemical compound relationships for HRAS gene (see all 90 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
gtp
72.5
118
8740369 (5), 9345266 (4), 8626511 (4), 1508192 (4) (see all 53 )
dihydroperillic acid
66.3
1
10955786 (1)
tyrosine
65.7
142
1371879 (5), 7568118 (4), 8407889 (4), 1508192 (4) (see all 81 )
phosphatidylinositol
60.9
33
1716764 (3), 9174058 (1), 16829523 (1), 18355852 (1) (see all 22 )
gdp
60.7
36
8740369 (3), 20483331 (2), 1820685 (1), 1633420 (1) (see all 18 )
azatyrosine
60.7
1
1594588 (1)
alpha-hydroxyfarnesylphosphonic acid
56.7
2
12941159 (1)
lovastatin
53.2
25
1673788 (4), 2043425 (4), 7829224 (2), 8425769 (2) (see all 13 )
perillic acid
50.8
1
10955786 (1)
crcs
46.4
6
15542810 (2), 14639609 (1), 18628094 (1), 18435933 (1)
Search CenterWatch for drugs/clinical trials and news about HRAS / RASH
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Transcriptsfor HRAS gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for HRAS gene (3 alternative transcripts): NM_001130442.1 NM_005343.2 NM_176795.3 Unigene Cluster for HRAS:
V-Ha-ras Harvey rat sarcoma viral oncogene homolog Hs.37003 [show with all ESTs ] Unigene Representative Sequence: NM_176795 11 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000478324 ENST00000397594 ENST00000397596 ENST00000493230 ENST00000462734 ENST00000311189 ENST00000479482 ENST00000468682 ENST00000482021 ENST00000451590 (uc001lpv.3 uc010qvx.2 )ENST00000417302 (uc010qvw.2 uc010qvy.2 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for HRAS (see all 7 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for HRAS (see all 4 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): HRAS (NM_005343 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for HRAS Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat HRAS
Additional cDNA sequence: AB451336.1 AB451485.1 AF493916.1 AJ437024.1 BC006499.2 BC095471.1 BT019421.1 CR536579.1 CR542271.1
8 DOTS entries : DT.412426 DT.95375678
DT.97859215 DT.120679118 DT.95375682 DT.101961179 DT.437065 DT.95283676 24/131 AceView cDNA sequences (see all 131 ):
BQ008725 AI268063 AF493916 CA335694 AI432164 NM_176795 BU678078 BE327640 BE208836 BM512457 BM763781 BM801632 BG060112 BM673300 BM873522 AW083644 BM995684 BU632361 BF725942 BQ212741 BE312482 BM706369 AI299343 BM696543 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for HRAS (see all 6 ) About this scheme ExUns: 1 ^ 2a · 2b · 2c ^ 3a · 3b ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8a · 8b · 8c SP1 :                                 SP2 :                   -               SP3 :                                 SP4 :                   -               SP5 :         -   -         -              
ECgene alternative splicing isoforms for HRAS
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Expression for HRAS gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section HRAS expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GAGGTGCCGG
About this image HRAS expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See HRAS Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for HRAS SOURCE GeneReport for Unigene cluster: Hs.37003 UniProtKB/Swiss-Prot: RASH_HUMAN, P01112 Tissue specificity : Widely expressed SABiosciences Expression via Pathway-Focused PCR Arrays including HRAS (see all 16 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for HRASBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat HRAS QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat HRAS QIAGEN QuantiFast Probe-based Assays in human , mouse , rat HRAS In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HRAS
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Orthologsfor HRAS gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for HRAS gene from 7/25 species (see all 25 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
HRAS1
v-Ha-ras Harvey rat sarcoma viral oncogene homolog
83.42(n) 97.88(a)
 
396229 NM_205292.1 NP_990623.1
lizard (Anolis carolinensis)
Reptilia
HRAS6
--
96(a)
1 ↔ 1
1(74820697-74838640)
African clawed frog (Xenopus laevis)
Amphibia
AY037008.12
--
83.19(n)
 
AY037008.1
zebrafish (Danio rerio)
Actinopterygii
wufa04e082
wufa04e08
76.68(n)
 
334824 AI657850.1
fruit fly (Drosophila melanogaster)
Insecta
Ras85D3
eggshell pattern formation RAS small monomeric more
86(a)
 
3 85D21 --
worm (Caenorhabditis elegans)
Secernentea
C08F8.73
RAS-related protein
46(a)
 
IV(11177461-11178071) --
rice (Oryza sativa)
Liliopsida
Os.255222
Transcribed sequence with weak similarity to protein more
73.7(n)
 
CA767542.2
ENSEMBL Gene Tree for HRAS (if available)TreeFam Gene Tree for HRAS (if available)
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Paralogsfor HRAS gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for HRAS gene REM1 2 RALA 2 RIT2 2 RIT1 2 RRAS 2 ERAS 2 RALB 2 NRAS 2 RRAD 2 REM2 2 KRAS 2 GEM 2 RRAS2 2 MRAS 2 18/92 SIMAP similar genes for HRAS using alignment to 2 protein entries: RASH_HUMAN (see all proteins )
(see all similar genes ):K-RAS N-ras c-bas/has KRAS H-RAS K-ras NRAS RAP1B RALA RAP1A RIT2 RIT1 RALB RAP2A RRAS2 RRAS RAP2C MRAS
HRAS for paralogs About GeneDecksing
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Genomic Variantsfor HRAS gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 11 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for HRAS (532242 - 537287 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 4 variations for HRAS 4 CNVs : 3831 29882 29883 29881 Human Gene Mutation Database (HGMD) : HRAS 5/15 SABiosciences Cancer Mutation PCR Assays for HRAS (see all 15 ):
5/26 SABiosciences Cancer Mutation PCR Arrays containing HRAS (see all 26 ):
1 SABiosciences qBiomarker Copy Number PCR Array containing HRAS :
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing HRAS
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Disorders
/ Diseasesfor HRAS gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
HRAS for disorders About GeneDecksing OMIM gene information: 190020 OMIM disorders : 109800 218040 188470 UniProtKB/Swiss-Prot: RASH_HUMAN, P01112
Defects in HRAS are the cause of faciocutaneoskeletal syndrome (FCSS) [MIM:218040]. A rare condition characterized by prenatally increased growth, postnatal growth deficiency, mental retardation, distinctive facial appearance, cardiovascular abnormalities (typically pulmonic stenosis, hypertrophic cardiomyopathy and/or atrial tachycardia), tumor predisposition, skin and musculoskeletal abnormalities Defects in HRAS are the cause of congenital myopathy with excess of muscle spindles (CMEMS) [MIM:218040]. CMEMS is a variant of Costello syndrome Defects in HRAS may be a cause of susceptibility to Hurthle cell thyroid carcinoma (HCTC) [MIM:607464]. Hurthle cell thyroid carcinoma accounts for approximately 3% of all thyroid cancers. Although they are classified as variants of follicular neoplasms, they are more often multifocal and somewhat more aggressive and are less likely to take up iodine than are other follicular neoplasms Note=Mutations which change positions 12, 13 or 61 activate the potential of HRAS to transform cultured cells and are implicated in a variety of human tumors Defects in HRAS are a cause of susceptibility to bladder cancer (BLC) [MIM:109800]. A malignancy originating in tissues of the urinary bladder. It often presents with multiple tumors appearing at different times and at different sites in the bladder. Most bladder cancers are transitional cell carcinomas. They begin in cells that normally make up the inner lining of the bladder. Other types of bladder cancer include squamous cell carcinoma (cancer that begins in thin, flat cells) and adenocarcinoma (cancer that begins in cells that make and release mucus and other fluids). Bladder cancer is a complex disorder with both genetic and environmental influences Note=Defects in HRAS are the cause of oral squamous cell carcinoma (OSCC) Defects in HRAS are the cause of Schimmelpenning-Feuerstein-Mims syndrome (SFM) [MIM:163200]. A disease characterized by sebaceous nevi, often on the face, associated with variable ipsilateral abnormalities of the central nervous system, ocular anomalies, and skeletal defects. Many oral manifestations have been reported, not only including hypoplastic and malformed teeth, and mucosal papillomatosis, but also ankyloglossia, hemihyperplastic tongue, intraoral nevus, giant cell granuloma, ameloblastoma, bone cysts, follicular cysts, oligodontia, and odontodysplasia. Sebaceous nevi follow the lines of Blaschko and these can continue as linear intraoral lesions, as in mucosal papillomatosis 20/159 diseases for HRAS (see all 159 ): About MalaCards oral squamous cell carcinoma squamous cell carcinoma costello syndrome sarcoma thrombocytopenia-absent radius syndrome uniparental disomy of chromosome 11 manic-depressive illness carcinoma spitz nevus thyroid cancer thyroiditis thyroid carcinoma, follicular, somatic supranuclear palsy progressive supranuclear palsy non-small cell lung carcinoma developmental disabilities short stature dentinogenesis imperfecta bladder cancer, somatic pulmonic stenosis 20/25 diseases from the University of Copenhagen DISEASES database for HRAS (see all 25 ):Colorectal cancer Carcinoma Lung cancer Pancreatic cancer Adenoma Melanoma Leukemia Autosomal dominant disease Breast cancer Endometrial cancer Papilloma Urinary bladder cancer Lymphoma Pancreatitis Gallbladder cancer Thyroid cancer Ovarian cancer Intellectual disability Retinoblastoma Hepatocellular carcinoma 10/92 Novoseek disease relationships for HRAS gene (see all 92 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
cfc syndrome
89.1
19
18651097 (2), 17366577 (2), 20052757 (1), 17483702 (1) (see all 10 )
noonan syndrome
85.1
39
18958496 (4), 17056636 (3), 16474405 (3), 19020799 (2) (see all 22 )
microsatellite instability
67
11
19186181 (1), 19513025 (1), 19908233 (1), 15294875 (1) (see all 10 )
colorectal cancer
61.2
72
15294875 (5), 11192825 (3), 12722796 (3), 14688025 (3) (see all 41 )
tumors
60.2
276
15753399 (4), 18268007 (4), 9563885 (3), 12788883 (3) (see all 99 )
adenocarcinoma lung
55.3
6
20007840 (2), 19162366 (1), 19826477 (1), 17024970 (1) (see all 5 )
short stature
51.6
8
16921267 (1), 17211612 (1), 18958496 (1), 17601930 (1) (see all 6 )
colon cancer
51.4
24
19843849 (4), 12009696 (3), 12652573 (2), 18790789 (1) (see all 14 )
colorectal tumors
51.3
7
16707468 (1), 19956069 (1), 8625092 (1), 10639144 (1) (see all 7 )
cancer
50.9
83
20477713 (5), 20005451 (3), 18418066 (3), 12788883 (2) (see all 44 )
GeneTests: HRAS Costello Syndrome Genetic Association Database (GAD): HRAS Human Genome Epidemiology (HuGE) Navigator: HRAS (39 documents) Tumor Gene Database (TGDB) : HRAS Export disorders for HRAS gene to outside databases
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Publicationsfor HRAS gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for HRAS gene, integrated from 9 sources (see all 1336 ): (articles sorted by number of sources associating them with HRAS) Utopia : connect your pdf to the dynamic world of online information
Alternative splicing of the human proto-oncogene c-H-ras renders a new Ras family protein that trafficks to cytoplasm and nucleus. (PubMed id 14500341) 1 , 2 , 9 Guil S.... Bach-Elias M. (2003) Postzygotic HRAS and KRAS mutations cause nevus sebaceous and Schimmelpenning syndrome. (PubMed id 22683711) 1 , 2 Groesser L.... Hafner C. (2012) Costello syndrome associated with novel germline HRAS mutations: an attenuated phenotype? (PubMed id 18247425) 1 , 2 Gripp K.W....Sol-Church K. (2008) Severe neonatal manifestations of Costello syndrome. (PubMed id 18039947) 1 , 2 Lo I.F....Kerr B. (2008) Feedback inhibition of calcineurin and Ras by a dual inhibitory protein Carabin. (PubMed id 17230191) 1 , 2 Pan F.... Liu J.O. (2007) Myopathy caused by HRAS germline mutations: implications for disturbed myogenic differentiation in the presence of constitutive HRas activation. (PubMed id 17412879) 1 , 2 van der Burgt I.... Zenker M. (2007) HRAS mutation analysis in Costello syndrome: genotype and phenotype correlation. (PubMed id 16329078) 1 , 2 Gripp K.W....Sol-Church K. (2006) An acylation cycle regulates localization and activity of palmitoylated Ras isoforms. (PubMed id 15705808) 1 , 2 Rocks O....Bastiaens P.I.H. (2005) Germline mutations in HRAS proto-oncogene cause Costello syndrome. (PubMed id 16170316) 1 , 2 Aoki Y.... Matsubara Y. (2005) DHHC9 and GCP16 constitute a human protein fatty acyltransferase with specificity for H- and N-Ras. (PubMed id 16000296) 1 , 2 Swarthout J.T.... Linder M.E. (2005)
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External Searches for HRAS gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing HRAS gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing HRAS gene
(According to HUGE )
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Specialized Databases showing HRAS gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for HRAS Pharmacogenomics, SNPs, Pathways ATLAS Chromosomes in Cancer entry for HRAS Genetics and Cytogenetics in Oncology and Haematology GeneReviews http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/HRAS
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About This Section Patent Information for HRAS gene: Search GeneIP for patents involving HRAS GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor HRAS gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for HRAS Browse OriGene shRNA RFPs OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for HRAS OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for HRAS OriGene Protein Over-expression Lysate for HRAS Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for HRAS OriGene 3'-UTR Clone for HRAS OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for HRAS OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for HRAS Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for HRAS OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for HRAS OriGene Custom Protein Services for HRAS OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat HRAS QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing HRAS QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat HRAS QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat HRAS QIAGEN QuantiFast Probe-based Assays in human , mouse , rat HRAS QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat HRAS
Search Tocris compounds for HRAS
Recombinant Protein for HRAS
HRAS Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HRAS
ThermoFisher Antibody for HRAS
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat HRAS
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