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Aliases for HPVC1 Gene

Subcategory (RNA class) for HPVC1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for HPVC1 Gene

  • Human Papillomavirus (Type 18) E5 Central Sequence-Like 1 2 3
  • HPV18E5L 3
  • PE5L 3

External Ids for HPVC1 Gene

Previous GeneCards Identifiers for HPVC1 Gene

  • GC07U990051
  • GC07M054268

Summaries for HPVC1 Gene

GeneCards Summary for HPVC1 Gene

HPVC1 (Human Papillomavirus (Type 18) E5 Central Sequence-Like 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HPVC1 Gene

Genomics for HPVC1 Gene

Genomic Location for HPVC1 Gene

54,201,224 bp from pter
54,202,421 bp from pter
1,198 bases
Minus strand

Genomic View for HPVC1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for HPVC1 Gene

No data available for Regulatory Elements for HPVC1 Gene

Proteins for HPVC1 Gene

Post-translational modifications for HPVC1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HPVC1 Gene

Domains & Families for HPVC1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HPVC1 Gene

Function for HPVC1 Gene

Molecular function for HPVC1 Gene

GENATLAS Biochemistry:
human papilloma virus 18,E5-like gene,murine HC1 homolog

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HPVC1 Gene

Localization for HPVC1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HPVC1 Gene

Pathways & Interactions for HPVC1 Gene

SuperPathways for HPVC1 Gene

No Data Available

Interacting Proteins for HPVC1 Gene

Gene Ontology (GO) - Biological Process for HPVC1 Gene


No data available for Pathways by source and SIGNOR curated interactions for HPVC1 Gene

Drugs & Compounds for HPVC1 Gene

No Compound Related Data Available

Transcripts for HPVC1 Gene

mRNA/cDNA for HPVC1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HPVC1 Gene

No ASD Table

Relevant External Links for HPVC1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HPVC1 Gene

SOURCE GeneReport for Unigene cluster for HPVC1 Gene Hs.742598

No Expression Related Data Available

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HPVC1 Gene

Orthologs for HPVC1 Gene

Evolution for HPVC1 Gene

Gene Tree for HPVC1 (if available)
Gene Tree for HPVC1 (if available)

No data available for Orthologs for HPVC1 Gene

Paralogs for HPVC1 Gene

No data available for Paralogs for HPVC1 Gene

Variants for HPVC1 Gene

Sequence variations from dbSNP and Humsavar for HPVC1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs3924910 -- 54,201,228(+) ACTAG(A/G)AAGTA nc-transcript-variant
rs4947885 -- 54,201,215(+) AATGT(A/G)AAAAA downstream-variant-500B
rs6971391 -- 54,201,581(+) ACACA(A/G)ACATA nc-transcript-variant
rs7458407 -- 54,201,544(+) tacat(A/G)cagac nc-transcript-variant
rs10234241 -- 54,203,862(+) GGCCA(C/T)TGGCT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for HPVC1 Gene

Variant ID Type Subtype PubMed ID
esv2734425 CNV Deletion 23290073
nsv528950 CNV Gain 19592680
nsv522755 CNV Loss 19592680
nsv526772 CNV Loss 19592680
dgv815n27 CNV Gain 19166990
nsv7397 OTHER Inversion 18451855

Relevant External Links for HPVC1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HPVC1 Gene

Disorders for HPVC1 Gene

Relevant External Links for HPVC1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with HPVC1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HPVC1 Gene

Publications for HPVC1 Gene

  1. A transcribed human sequence related to the mouse HC1 and the human papillomavirus type 18 E5 genes is located at chromosome 7p13-14. (PMID: 7581372) Geisen C. … Kahn T. (Hum. Mol. Genet. 1995) 2 67

Products for HPVC1 Gene

Sources for HPVC1 Gene

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