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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HPS4 Gene

protein-coding   GIFtS: 54
GCID: GC22M026840

Hermansky-Pudlak syndrome 4

 Explore 11 diseases affiliated with
HPS4 via our new
 Human Malady Compendium 
Biological research products
for HPS4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Hermansky-Pudlak Syndrome 41 2
LE1 2
KIAA16671 3
Light-Ear Protein Homolog2 3
Hermansky-Pudlak Syndrome 4 Protein2

External Ids:    HGNC: 158441   Entrez Gene: 897812   Ensembl: ENSG000001000997   OMIM: 6066825   UniProtKB: Q9NQG73   

Export aliases for HPS4 gene to outside databases

Previous GC identifers: GC22M023544 GC22M025172 GC22M025177 GC22M009795


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HPS4:
This gene encodes a protein component of biogenesis of lysosome-related organelles complexes (BLOC). BLOC complexes are
important for the formation of endosomal-lysosomal organelles such as melanosomes and platelet dense granules.
Mutations in this gene result in subtype 4 of Hermansky-Pudlak syndrome, a form of albinism. Alternative splicing
results in multiple transcript variants. (provided by RefSeq, Aug 2012)

UniProtKB/Swiss-Prot: HPS4_HUMAN, Q9NQG7
Function: May function in the pathway of organelle biogenesis

Gene Wiki entry for HPS4


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000022.10  NC_018933.1  NT_011520.12  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HPS4 gene promoter:
         COUP-TF1   COUP-TF   STAT3   COUP   HNF-4alpha2   HNF-4alpha1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): HPS4 promoter sequence
   Search SABiosciences Chromatin IP Primers for HPS4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HPS4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 22cen-q12.3   Ensembl cytogenetic band:  22q12.1   HGNC cytogenetic band: 22cen-q12.3

HPS4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HPS4 gene location

GeneLoc information about chromosome 22         GeneLoc Exon Structure

GeneLoc location for GC22M026840:  view genomic region     (about GC identifiers)

Start:
26,839,389 bp from pter      End:
26,879,820 bp from pter
Size:
40,432 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HPS4_HUMAN, Q9NQG7 (See protein sequence)
Recommended Name: Hermansky-Pudlak syndrome 4 protein  
Size: 708 amino acids; 76919 Da
Sequence caution: Sequence=BAB33337.1; Type=Frameshift; Positions=237; Sequence=BAB33337.1; Type=Miscellaneous
discrepancy; Note=Intron retention; Sequence=BC035614; Type=Miscellaneous discrepancy; Note=Intron retention;
Secondary accessions: B1AHQ4 Q5H8V6 Q96LX6 Q9BY93 Q9UH37 Q9UH38
Alternative splicing: 4 isoforms:  Q9NQG7-1   Q9NQG7-2   Q9NQG7-3   Q9NQG7-4   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for HPS4: NX_Q9NQG7

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9NQG7

  • HPS4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_071364.4  NP_690054.1  

    ENSEMBL proteins: 
     ENSP00000381213   ENSP00000399705   ENSP00000430291   ENSP00000384185   ENSP00000338457  
     ENSP00000406764   ENSP00000415081   ENSP00000381210  

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    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for HPS4

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005624membrane fraction ----
    GO:0005737cytoplasm IDA12756248
    GO:0005764lysosome IDA12663659
    GO:0016020membrane IDA12756248
    GO:0016023cytoplasmic membrane-bounded vesicle ----


    HPS4 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HPS4 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR026091 HPS4

    Graphical View of Domain Structure for InterPro Entry Q9NQG7

    ProtoNet protein and cluster: Q9NQG7


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: HPS4_HUMAN, Q9NQG7
    Function: May function in the pathway of organelle biogenesis

    miRNA
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    miRTarBase miRNAs that target HPS4:
    hsa-mir-1 (MIRT002809)

    OriGene 3'-UTR Clone (see all 2): HPS4
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat HPS4
    8 QIAGEN miScript miRNA Assays for microRNAs that regulate HPS4:
    hsa-miR-30c hsa-miR-30d hsa-miR-888 hsa-miR-30a hsa-miR-30b hsa-miR-129-3p hsa-miR-129* hsa-miR-30e
    SwitchGear 3'UTR luciferase reporter plasmidHPS4 3' UTR sequence
    Inhib. RNA
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HPS4

    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding IPI12756248
    GO:0042803protein homodimerization activity IPI12663659
    GO:0046983protein dimerization activity IPI12663659


    HPS4 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for HPS4:
     Decreased Hepatitis C virus re 

    Animal Models:
         10 MGI mutant phenotypes (inferred from 1 allele(MGI details for Hps4):
     cardiovascular system  cellular  craniofacial  hearing/vestibular/ear  hematopoietic system 
     homeostasis/metabolism  integument  pigmentation  renal/urinary system  vision/eye 

    HPS4 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HPS4

    STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

    4 Interacting proteins for HPS4 (Q9NQG71, 3 ENSP000003384574) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HPS1Q929021, 3, ENSP000003266494EBI-704377,EBI-704347 I2D: score=2 STRING: ENSP00000326649
    RAC1P630003, ENSP000003484614I2D: score=3 STRING: ENSP00000348461
    RPS3P233963I2D: score=1 
    TMEM55BQ86T033I2D: score=1 
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006605protein targeting IDA12663659
    GO:0006996organelle organization ----
    GO:0007040lysosome organization IDA12663659
    GO:0007596blood coagulation IEA--
    GO:0007599hemostasis TAS11836498


    HPS4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for HPS4
    Search CenterWatch for drugs/clinical trials and news about HPS4 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HPS4 gene (5 alternative transcripts): 
    NM_022081.5  NM_152841.2  NM_152840.1  NM_152842.1  NM_152843.1  

    Unigene Cluster for HPS4:

    Hermansky-Pudlak syndrome 4
    Hs.474436  [show with all ESTs]
    Unigene Representative Sequence: NR_073135
    18/20 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 20):
    ENST00000519774 ENST00000493455 ENST00000491142 ENST00000398145(uc003acl.3 uc003acn.3)
    ENST00000429411 ENST00000464362(uc003ach.3) ENST00000402105 ENST00000336873
    ENST00000439453 ENST00000466781(uc003ack.3 uc010gvd.1) ENST00000496385
    ENST00000485842 ENST00000522475 ENST00000422379 ENST00000459918 ENST00000481910(uc003aco.1)
    ENST00000483631 ENST00000479064

    miRNA
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    OriGene 3'-UTR Clone (see all 2): HPS4
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    8 QIAGEN miScript miRNA Assays for microRNAs that regulate HPS4:
    hsa-miR-30c hsa-miR-30d hsa-miR-888 hsa-miR-30a hsa-miR-30b hsa-miR-129-3p hsa-miR-129* hsa-miR-30e
    SwitchGear 3'UTR luciferase reporter plasmidHPS4 3' UTR sequence
    Inhib. RNA
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat HPS4
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat HPS4

    Additional cDNA sequence: 

    AK054717.1 AK057648.1 AK095406.1 AK097529.1 AK123691.1 AK290211.1 AL365512.1 AL713795.1 
    AY043416.1 BC028625.1 BC035614.1 BC050285.1 BC065030.1 CR456392.1 NR_073135.1 NR_073136.1 

    23 DOTS entries:

    DT.100732145  DT.75120241  DT.100785566  DT.100785567  DT.100785565  DT.120665885  DT.100773633  DT.91742410 
    DT.100785568  DT.408739  DT.91874162  DT.95353765  DT.97840582  DT.101975758  DT.40125143  DT.120665936 
    DT.91742414  DT.95156232  DT.97840583  DT.120665933  DT.312064  DT.91742411  DT.120665922 

    24/268 AceView cDNA sequences (see all 268):

    BE550121 Z40194 AI758719 BC065030 BG575559 BQ181153 BU786097 AI695887 
    AA668521 CK429971 BM557146 BU617290 AA356313 AA550810 AY043416 CD300278 
    BQ787594 BQ272169 NM_022081 BX328460 BM696944 BU619987 AA558197 BQ582130 

    GeneLoc Exon Structure

    5/12 Alternative Splicing Database (ASD) splice patterns (SP) for HPS4 (see all 12)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e · 1f · 1g ^ 2 ^ 3a · 3b · 3c ^ 4a · 4b · 4c · 4d · 4e · 4f ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^
    SP1:                                                                                                              -                       -                     
    SP2:                                                                                                              -                       -                     
    SP3:                                                                                                                                                            
    SP4:                                                                                                              -                       -                     
    SP5:                                                                                                                                      -                 -   

    ExUns: 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16 ^ 17 ^ 18 ^ 19a · 19b · 19c ^ 20
    SP1:  -                                   -                                 
    SP2:                                                                        
    SP3:                                      -                                 
    SP4:                          -     -     -                                 
    SP5:  -     -     -     -                                                   


    ECgene alternative splicing isoforms for HPS4

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HPS4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TCAGTGAACT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See HPS4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HPS4

    SOURCE GeneReport for Unigene cluster: Hs.474436
        SABiosciences Custom PCR Arrays for HPS4
    Primer
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for HPS4

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for HPS4 gene from 5/13 species (see all 13)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Hps41 , 5 Hermansky-Pudlak syndrome 4 homolog (human)1, 5 72.26(n)1
    65.82(a)1
      5 (54.69 cM)5
    1922321  NM_138646.31  NP_619587.31 
     1123430835 
    chicken
    (Gallus gallus)
    Aves HPS41 Hermansky-Pudlak syndrome 4 63.3(n)
    59.92(a)
      416907  XM_415198.2  XP_415198.2 
    African clawed frog
    (Xenopus laevis)
    Amphibia BJ093780.12   -- 71.93(n)    BJ093780.1 
    zebrafish
    (Danio rerio)
    Actinopterygii BC052117.12   -- 74.33(n)   393296  BC052117.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta HPS46
    Hermansky-Pudlak Syndrome 4 ortholog
    14(a)
    1 ↔ 1
    2R(13571102-13578327)


    ENSEMBL Gene Tree for HPS4 (if available)
    TreeFam Gene Tree for HPS4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/681 NCBI SNPs in HPS4 are shown (see all 681    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 22 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1194710251,2
    Cpathogenic9812078(-) CTCAGG/TAGCAG 6 E * nc-transcript-variantstg10--------
    rs1194710231,2
    Cpathogenic9812093(-) TTCACC/TGAACA 6 R * nc-transcript-variantstg10--------
    rs1194710221,2
    Cpathogenic9814296(-) TTCTGC/TAGACC 6 Q * stg10--------
    rs1194710241,2
    Cpathogenic9815913(-) GCACGG/TAGTGG 6 E * stg10--------
    rs752298401,2
    C,--9794020(+) GACAAC/TGGCCC 4 -- ds50010--------
    rs766987851,2
    C,--9794021(+) ACAACG/AGCCCA 4 -- ds50012Minor allele frequency- A:0.03NA 122
    rs37525881,2
    C,F,H,--9795086(+) ACGGAT/CAGGCT 4 -- nc-transcript-variantut31 ese36Minor allele frequency- C:0.03EA NA NS 1938
    rs72927641,2
    C,F,H,--9795245(+) AGAGAA/CCTTGT 4 -- ut31 nc-transcript-variantese310Minor allele frequency- C:0.02NS EA NA CSA WA 1212
    rs37525901,2
    C,F,H,--9795386(+) GAGGGA/TGACAC 4 -- ut31 nc-transcript-variantese3 trp39Minor allele frequency- T:0.03EA NA NS 2194
    rs72915761,2
    C,F,H--9795523(+) CCCACG/ATTACG 4 -- nc-transcript-variantut315Minor allele frequency- A:0.01NS EA CSA 422

    HapMap Linkage Disequilibrium report for HPS4 (26839389 - 26879820 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for HPS4: --
    Human Gene Mutation Database (HGMD): HPS4

    Locus Specific Mutation Databases (LSDB): HPS4

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HPS4 for disorders           About GeneDecksing

    OMIM gene information: 606682   
    OMIM disorders: 203300  
    UniProtKB/Swiss-Prot: HPS4_HUMAN, Q9NQG7
  • Defects in HPS4 are the cause of Hermansky-Pudlak syndrome type 4 (HPS4) [MIM:614073]. Hermansky-Pudlak
  • syndrome (HPS) is a genetically heterogeneous, rare, autosomal recessive disorder characterized by oculocutaneous
    albinism, bleeding due to platelet storage pool deficiency, and lysosomal storage defects. This syndrome results from
    defects of diverse cytoplasmic organelles including melanosomes, platelet dense granules and lysosomes. Ceroid storage
    in the lungs is associated with pulmonary fibrosis, a common cause of premature death in individuals with HPS

    11 diseases for HPS4:    About MalaCards
    hermansky-pudlak syndrome    hermansky-pudlak syndrome 4    albinism    platelet storage pool deficiency
    hermansky-pudlak syndrome 1    oculocutaneous albinism    ocular albinism    intestinal disease
    pulmonary fibrosis    crohn's disease    fibrosis

    4 diseases from the University of Copenhagen DISEASES database for HPS4:
    Hermansky-Pudlak syndrome     Oculocutaneous albinism     Platelet storage pool deficiency     Pulmonary fibrosis

    1 Novoseek disease relationship for HPS4 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    hermansky-pudlak syndrome 95 3 11836498 (1), 12756248 (1), 18326704 (1)

    GeneTests: HPS4
    Hermansky-Pudlak Syndrome

    Human Genome Epidemiology (HuGE) Navigator: HPS4 (2 documents)

    Export disorders for HPS4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HPS4 gene, integrated from 9 sources (see all 33):
    (articles sorted by number of sources associating them with HPS4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Hermansky-Pudlak syndrome is caused by mutations in HPS4, the human homolog of the mouse light-ear gene. (PubMed id 11836498)1, 2, 3, 9 Suzuki T.... Spritz R.A. (2002)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    4. The Hermansky-Pudlak syndrome 1 (HPS1) and HPS4 proteins are components of two complexes, BLOC-3 and BLOC-4, involved in the biogenesis of lysosome-related organelles. (PubMed id 12663659)1, 3 Chiang P.W....Spritz R.A. (2003)
    5. Reevaluating human gene annotation: a second-generation analysis of chromosome 22. (PubMed id 12529303)1, 2 Collins J.E.... Dunham I. (2003)
    6. Identification of novel transcribed sequences on human chromosome 22 by expressed sequence tag mapping. (PubMed id 11258795)1, 2 Hirosawa M....Ohara O. (2001)
    7. The DNA sequence of human chromosome 22. (PubMed id 10591208)1, 2 Dunham I....O'Brien K.P. (1999)
    8. BLOC-3, a protein complex containing the Hermansky-Pudlak syndrome gene products HPS1 and HPS4. (PubMed id 12756248)1, 9 Martina J.A....Bonifacino J.S. (2003)
    9. Hermansky-Pudlak syndrome type 4 (HPS-4): clinical and molecular characteristics. (PubMed id 12664304)1, 9 Anderson P.D....Gahl W.A. (2003)
    10. Comprehensive Analysis of Oculocutaneous Albinism among Non-Hispanic Caucasians Shows that OCA1 Is the Most Prevalent OCA Type. (PubMed id 18463683)1, 9 Hutton S.M. and Spritz R.A. (2008)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 89781 HGNC: 15844 AceView: HPS4 Ensembl:ENSG00000100099 euGenes: HUgn89781
    ECgene: HPS4 H-InvDB: HPS4

    (According to HUGE)
    About This Section
    HUGE: KIAA1667

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HPS4 Pharmacogenomics, SNPs, Pathways
    Mutations of the HPS4 genehttp://www.retina-international.org/files/sci-news/lemut.htm
    GeneReviewshttp://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/HPS4

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HPS4 gene:
    Search GeneIP for patents involving HPS4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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     Regulatory tfbs in HPS4 promoter
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