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Aliases for HP11014 Gene

Subcategory (RNA class) for HP11014 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for HP11014 Gene

  • Uncharacterized HP11014 3
  • AP001318.3 5

External Ids for HP11014 Gene

Summaries for HP11014 Gene

GeneCards Summary for HP11014 Gene

HP11014 (Uncharacterized HP11014) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for HP11014 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HP11014 Gene

Genomics for HP11014 Gene

GeneHancer (GH) Regulatory Elements for HP11014 Gene

Promoters and enhancers for HP11014 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I126302 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 +0.3 285 2.4 PKNOX1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 DCPS HP11014 GC11M126303 FAM118B
GH11I126305 Enhancer 0.9 FANTOM5 ENCODE 550.8 -1.5 -1538 0.5 HDGF SCRT1 PKNOX1 ZNF687 TRIM22 EBF1 DPF2 SCRT2 IKZF1 NBN HP11014 FOXRED1 FAM118B DCPS HYLS1 PIR55528
GH11I126350 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 46.6 -51.8 -51762 11.5 HDGF PKNOX1 ARNT SIN3A YBX1 DMAP1 POLR2B ZNF766 E2F8 FOS ST3GAL4 GSEC HP11014 TIRAP STT3A FOXRED1 DCPS FAM118B ENSG00000278215
GH11I125591 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 38.6 +711.6 711584 3.1 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B STT3A STT3A-AS1 HP11014 TMEM218 CHEK1 MSANTD2 ENSG00000254509 TIRAP ENSG00000254694 EI24
GH11I125624 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 35.3 +678.2 678248 3.4 MLX ZFP64 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 MEF2D CHEK1 HP11014 TMEM218 TIRAP MSANTD2 FEZ1 STT3A CCDC15 ACRV1 PUS3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HP11014 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HP11014 Gene

Genomic Locations for HP11014 Gene
chr11:126,294,298-126,304,318
(GRCh38/hg38)
Size:
10,021 bases
Orientation:
Minus strand
chr11:126,164,193-126,174,213
(GRCh37/hg19)

Genomic View for HP11014 Gene

Genes around HP11014 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HP11014 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HP11014 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HP11014 Gene

Proteins for HP11014 Gene

Post-translational modifications for HP11014 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HP11014 Gene

Domains & Families for HP11014 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HP11014 Gene

Function for HP11014 Gene

Phenotypes From GWAS Catalog for HP11014 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HP11014 Gene

Localization for HP11014 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HP11014 Gene

Pathways & Interactions for HP11014 Gene

SuperPathways for HP11014 Gene

No Data Available

Interacting Proteins for HP11014 Gene

Gene Ontology (GO) - Biological Process for HP11014 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HP11014 Gene

Drugs & Compounds for HP11014 Gene

No Compound Related Data Available

Transcripts for HP11014 Gene

mRNA/cDNA for HP11014 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HP11014 Gene

No ASD Table

Relevant External Links for HP11014 Gene

GeneLoc Exon Structure for
HP11014

Expression for HP11014 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HP11014 Gene

Orthologs for HP11014 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for HP11014 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 34
  • 100 (a)
OneToOne
Species where no ortholog for HP11014 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for HP11014 Gene

ENSEMBL:
Gene Tree for HP11014 (if available)
TreeFam:
Gene Tree for HP11014 (if available)

Paralogs for HP11014 Gene

No data available for Paralogs for HP11014 Gene

Variants for HP11014 Gene

Sequence variations from dbSNP and Humsavar for HP11014 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000339157 -- 126,294,684(-) A/G intron_variant
rs1000475176 -- 126,294,286(-) T/A downstream_transcript_variant
rs1000658661 -- 126,295,766(-) C/T intron_variant
rs1001476717 -- 126,295,896(-) C/G intron_variant
rs1001606797 -- 126,297,620(-) C/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for HP11014 Gene

Disorders for HP11014 Gene

Additional Disease Information for HP11014

No disorders were found for HP11014 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HP11014 Gene

Publications for HP11014 Gene

  1. Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method. (PMID: 21697133) Oshikawa M … Kato S (Investigative ophthalmology & visual science 2011) 3 58

Products for HP11014 Gene

Sources for HP11014 Gene

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