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Aliases for HOXB-AS1 Gene

Subcategory (RNA class) for HOXB-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HOXB-AS1 Gene

  • HOXB Cluster Antisense RNA 1 2 3
  • HOXB Cluster Antisense RNA 1 (Non-Protein Coding) 2

External Ids for HOXB-AS1 Gene

Summaries for HOXB-AS1 Gene

GeneCards Summary for HOXB-AS1 Gene

HOXB-AS1 (HOXB Cluster Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HOXB-AS1 Gene

Genomics for HOXB-AS1 Gene

Genomic Location for HOXB-AS1 Gene

Start:
48,543,551 bp from pter
End:
48,551,250 bp from pter
Size:
7,700 bases
Orientation:
Plus strand

Genomic View for HOXB-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HOXB-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HOXB-AS1 Gene

No data available for Regulatory Elements for HOXB-AS1 Gene

Proteins for HOXB-AS1 Gene

Post-translational modifications for HOXB-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HOXB-AS1 Gene

Domains for HOXB-AS1 Gene

Gene Families for HOXB-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with HOXB-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for HOXB-AS1 Gene

Function for HOXB-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HOXB-AS1 Gene

Localization for HOXB-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for HOXB-AS1 Gene

Pathways for HOXB-AS1 Gene

SuperPathways for HOXB-AS1 Gene

No Data Available

Interacting Proteins for HOXB-AS1 Gene

Gene Ontology (GO) - Biological Process for HOXB-AS1 Gene

None

No data available for Pathways by source for HOXB-AS1 Gene

Transcripts for HOXB-AS1 Gene

mRNA/cDNA for HOXB-AS1 Gene

(1) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HOXB-AS1 Gene

HOXB cluster antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HOXB-AS1 Gene

No ASD Table

Relevant External Links for HOXB-AS1 Gene

GeneLoc Exon Structure for
HOXB-AS1
ECgene alternative splicing isoforms for
HOXB-AS1

Expression for HOXB-AS1 Gene

mRNA expression in normal human tissues for HOXB-AS1 Gene

SOURCE GeneReport for Unigene cluster for HOXB-AS1 Gene Hs.171806

genes like me logo Genes that share expressions with HOXB-AS1: view

Orthologs for HOXB-AS1 Gene

Evolution for HOXB-AS1 Gene

ENSEMBL:
Gene Tree for HOXB-AS1 (if available)
TreeFam:
Gene Tree for HOXB-AS1 (if available)

No data available for Orthologs for HOXB-AS1 Gene

Paralogs for HOXB-AS1 Gene

No data available for Paralogs for HOXB-AS1 Gene

Variants for HOXB-AS1 Gene

Sequence variations from dbSNP and Humsavar for HOXB-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs999493 -- 48,548,157(-) GGTCC(C/T)CAGGC intron-variant
rs5820712 -- 48,547,231(+) GCCCA(-/G)AGAAC intron-variant
rs5820713 -- 48,548,327(+) TTTTG(-/T)TTTTT intron-variant
rs5820714 -- 48,548,341(+) TTTTT(-/TT)AGATT intron-variant
rs12951076 -- 48,547,747(+) TTTAT(C/T)GTTAT intron-variant

Relevant External Links for HOXB-AS1 Gene

HapMap Linkage Disequilibrium report
HOXB-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for HOXB-AS1 Gene

Disorders for HOXB-AS1 Gene

No disorders were found for HOXB-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for HOXB-AS1 Gene

Publications for HOXB-AS1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3

Products for HOXB-AS1 Gene

Sources for HOXB-AS1 Gene

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