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Aliases for HOXA-AS3 Gene

Subcategory (RNA class) for HOXA-AS3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for HOXA-AS3 Gene

  • HOXA Cluster Antisense RNA 3 2 3 5
  • HOXA Cluster Antisense RNA 3 (Non-Protein Coding) 2 3
  • HOXA6as 3

External Ids for HOXA-AS3 Gene

Previous GeneCards Identifiers for HOXA-AS3 Gene

  • GC07P027173

Summaries for HOXA-AS3 Gene

GeneCards Summary for HOXA-AS3 Gene

HOXA-AS3 (HOXA Cluster Antisense RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HOXA-AS3 Gene

Genomics for HOXA-AS3 Gene

Regulatory Elements for HOXA-AS3 Gene


Promoters for HOXA-AS3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HOXA-AS3 on UCSC Golden Path with GeneCards custom track

Genomic Location for HOXA-AS3 Gene

Chromosome:
7
Start:
27,129,977 bp from pter
End:
27,155,928 bp from pter
Size:
25,952 bases
Orientation:
Plus strand

Genomic View for HOXA-AS3 Gene

Genes around HOXA-AS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HOXA-AS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HOXA-AS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HOXA-AS3 Gene

Proteins for HOXA-AS3 Gene

Post-translational modifications for HOXA-AS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HOXA-AS3 Gene

Domains & Families for HOXA-AS3 Gene

Gene Families for HOXA-AS3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HOXA-AS3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HOXA-AS3 Gene

Function for HOXA-AS3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HOXA-AS3 Gene

Localization for HOXA-AS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HOXA-AS3 Gene

Pathways & Interactions for HOXA-AS3 Gene

SuperPathways for HOXA-AS3 Gene

No Data Available

Interacting Proteins for HOXA-AS3 Gene

Gene Ontology (GO) - Biological Process for HOXA-AS3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HOXA-AS3 Gene

Drugs & Compounds for HOXA-AS3 Gene

No Compound Related Data Available

Transcripts for HOXA-AS3 Gene

mRNA/cDNA for HOXA-AS3 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HOXA-AS3 Gene

No ASD Table

Relevant External Links for HOXA-AS3 Gene

GeneLoc Exon Structure for
HOXA-AS3
ECgene alternative splicing isoforms for
HOXA-AS3

Expression for HOXA-AS3 Gene

mRNA expression in normal human tissues for HOXA-AS3 Gene

mRNA differential expression in normal tissues according to GTEx for HOXA-AS3 Gene

This gene is overexpressed in Fallopian Tube (x4.6) and Adrenal Gland (x4.1).
genes like me logo Genes that share expression patterns with HOXA-AS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HOXA-AS3 Gene

Orthologs for HOXA-AS3 Gene

Evolution for HOXA-AS3 Gene

ENSEMBL:
Gene Tree for HOXA-AS3 (if available)
TreeFam:
Gene Tree for HOXA-AS3 (if available)

No data available for Orthologs for HOXA-AS3 Gene

Paralogs for HOXA-AS3 Gene

No data available for Paralogs for HOXA-AS3 Gene

Variants for HOXA-AS3 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for HOXA-AS3 Gene

Disorders for HOXA-AS3 Gene

Relevant External Links for HOXA-AS3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HOXA-AS3

No disorders were found for HOXA-AS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HOXA-AS3 Gene

Publications for HOXA-AS3 Gene

  1. lncRNAdb: a reference database for long noncoding RNAs. (PMID: 21112873) Amaral P.P. … Mattick J.S. (Nucleic Acids Res. 2011) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for HOXA-AS3 Gene

Sources for HOXA-AS3 Gene

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