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Aliases for HOXA-AS2 Gene

Subcategory (RNA class) for HOXA-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for HOXA-AS2 Gene

  • HOXA Cluster Antisense RNA 2 2 3
  • HOXA Cluster Antisense RNA 2 (Non-Protein Coding) 2 3
  • HOXA3as 3

External Ids for HOXA-AS2 Gene

ORGUL Members for HOXA-AS2 Gene

Previous GeneCards Identifiers for HOXA-AS2 Gene

  • GC07P027151

Summaries for HOXA-AS2 Gene

GeneCards Summary for HOXA-AS2 Gene

HOXA-AS2 (HOXA Cluster Antisense RNA 2) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HOXA-AS2 Gene

Genomics for HOXA-AS2 Gene

Genomic Location for HOXA-AS2 Gene

Start:
27,107,777 bp from pter
End:
27,134,302 bp from pter
Size:
26,526 bases
Orientation:
Plus strand

Genomic View for HOXA-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HOXA-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HOXA-AS2 Gene

No data available for Regulatory Elements for HOXA-AS2 Gene

Proteins for HOXA-AS2 Gene

Post-translational modifications for HOXA-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HOXA-AS2 Gene

Domains for HOXA-AS2 Gene

Gene Families for HOXA-AS2 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HOXA-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HOXA-AS2 Gene

Function for HOXA-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HOXA-AS2 Gene

Localization for HOXA-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HOXA-AS2 Gene

Pathways for HOXA-AS2 Gene

SuperPathways for HOXA-AS2 Gene

No Data Available

Interacting Proteins for HOXA-AS2 Gene

Gene Ontology (GO) - Biological Process for HOXA-AS2 Gene

None

No data available for Pathways by source for HOXA-AS2 Gene

Transcripts for HOXA-AS2 Gene

mRNA/cDNA for HOXA-AS2 Gene

(7) Additional mRNA sequences :
(13) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HOXA-AS2 Gene

HOXA cluster antisense RNA 2:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HOXA-AS2

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HOXA-AS2 Gene

No ASD Table

Relevant External Links for HOXA-AS2 Gene

GeneLoc Exon Structure for
HOXA-AS2
ECgene alternative splicing isoforms for
HOXA-AS2

Expression for HOXA-AS2 Gene

mRNA expression in normal human tissues for HOXA-AS2 Gene

SOURCE GeneReport for Unigene cluster for HOXA-AS2 Gene Hs.714774

genes like me logo Genes that share expressions with HOXA-AS2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for HOXA-AS2 Gene

Orthologs for HOXA-AS2 Gene

Evolution for HOXA-AS2 Gene

ENSEMBL:
Gene Tree for HOXA-AS2 (if available)
TreeFam:
Gene Tree for HOXA-AS2 (if available)

No data available for Orthologs for HOXA-AS2 Gene

Paralogs for HOXA-AS2 Gene

No data available for Paralogs for HOXA-AS2 Gene

Variants for HOXA-AS2 Gene

Relevant External Links for HOXA-AS2 Gene

HapMap Linkage Disequilibrium report
HOXA-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for HOXA-AS2 Gene

Disorders for HOXA-AS2 Gene

No disorders were found for HOXA-AS2 Gene.

No data available for UniProtKB/Swiss-Prot for HOXA-AS2 Gene

Publications for HOXA-AS2 Gene

  1. HOX antisense lincRNA HOXA-AS2 is an apoptosis repressor in all trans retinoic acid treated NB4 promyelocytic leukemia cells. (PMID: 23649634) Zhao H. … Newburger P.E. (J. Cell. Biochem. 2013) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. lncRNAdb: a reference database for long noncoding RNAs. (PMID: 21112873) Amaral P.P. … Mattick J.S. (Nucleic Acids Res. 2011) 3

Products for HOXA-AS2 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HOXA-AS2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HOXA-AS2
    • Block miRNA regulation of HOXA-AS2 using miScript Target Protectors

    Sources for HOXA-AS2 Gene

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