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HNRNPKP3 Gene(Pseudogene)

Heterogeneous Nuclear Ribonucleoprotein K Pseudogene 3

GCID:
GC11M043142
GIFtS:
19
Genes Participants
UDN Logo

Aliases for HNRNPKP3 Gene

Aliases for HNRNPKP3 Gene

  • Heterogeneous Nuclear Ribonucleoprotein K Pseudogene 3 2 3 5

External Ids for HNRNPKP3 Gene

Summaries for HNRNPKP3 Gene

GeneCards Summary for HNRNPKP3 Gene

HNRNPKP3 (Heterogeneous Nuclear Ribonucleoprotein K Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPKP3 Gene

Genomics for HNRNPKP3 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HNRNPKP3 Gene

Enhancers for HNRNPKP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G043268 0.5 ENCODE 0.7 +0.4 430 1.8 CTCF POLR2A SMARCA4 API5 TTC17 HNRNPKP3 ENSG00000254725
GH11G043234 0.4 ENCODE 0.3 +34.1 34124 1.3 SMARCA4 HNRNPKP3 ENSG00000254725
GH11G043135 0.7 ENCODE 0.1 +133.1 133117 1.2 MTA2 BHLHE40 ASH2L JUNB DPF2 EP300 SP1 IKZF1 EED IKZF2 TTC17 ENSG00000254725 HNRNPKP3
GH11G043145 0.7 FANTOM5 0.1 +123.5 123488 0.2 TBP MTA2 JUNB DPF2 SP1 CBX5 POLR2A IKZF1 NBN ETV6 ENSG00000254725 HNRNPKP3
GH11G043072 0.4 ENCODE 0.1 +197.1 197098 0.2 HDAC2 FOXP2 ENSG00000254725 HNRNPKP3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HNRNPKP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for HNRNPKP3 Gene

Chromosome:
11
Start:
43,120,762 bp from pter
End:
43,269,393 bp from pter
Size:
148,632 bases
Orientation:
Minus strand

Genomic View for HNRNPKP3 Gene

Genes around HNRNPKP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPKP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPKP3 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HNRNPKP3 Gene

Proteins for HNRNPKP3 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HNRNPKP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPKP3 Gene

Domains & Families for HNRNPKP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HNRNPKP3 Gene

Function for HNRNPKP3 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Phenotypes for HNRNPKP3 Gene

GenomeRNAi human phenotypes for HNRNPKP3:
genes like me logo Genes that share phenotypes with HNRNPKP3: view

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPKP3 Gene

Localization for HNRNPKP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HNRNPKP3 Gene

Pathways & Interactions for HNRNPKP3 Gene

SuperPathways for HNRNPKP3 Gene

PathCards logo More details on SuperPathways for HNRNPKP3
No Data Available

Interacting Proteins for HNRNPKP3 Gene

Gene Ontology (GO) - Biological Process for HNRNPKP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPKP3 Gene

Drugs & Compounds for HNRNPKP3 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HNRNPKP3 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HNRNPKP3 Gene

(2) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HNRNPKP3 Gene

Heterogeneous nuclear ribonucleoprotein K pseudogene 3:
Representative Sequences:

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPKP3 Gene

No ASD Table

Relevant External Links for HNRNPKP3 Gene

GeneLoc Exon Structure for
HNRNPKP3
ECgene alternative splicing isoforms for
HNRNPKP3

Expression for HNRNPKP3 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HNRNPKP3 Gene

mRNA expression in normal human tissues for HNRNPKP3 Gene
mRNA expression by GTEx for HNRNPKP3 Gene

mRNA differential expression in normal tissues according to GTEx for HNRNPKP3 Gene

This gene is overexpressed in Brain - Amygdala (x5.2), Brain - Anterior cingulate cortex (BA24) (x5.2), Brain - Caudate (basal ganglia) (x4.6), and Brain - Nucleus accumbens (basal ganglia) (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of HNRNPKP3 Gene:

HNRNPKP3

SOURCE GeneReport for Unigene cluster for HNRNPKP3 Gene:

Hs.446761
genes like me logo Genes that share expression patterns with HNRNPKP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPKP3 Gene

Orthologs for HNRNPKP3 Gene

Evolution for HNRNPKP3 Gene

ENSEMBL:
Gene Tree for HNRNPKP3 (if available)
TreeFam:
Gene Tree for HNRNPKP3 (if available)

No data available for Orthologs for HNRNPKP3 Gene

Paralogs for HNRNPKP3 Gene

No data available for Paralogs for HNRNPKP3 Gene

Variants for HNRNPKP3 Gene

Sequence variations from dbSNP and Humsavar for HNRNPKP3 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000375417 -- 43,264,310(+) TGCTT(A/T)TATAA intron-variant
rs1000421317 -- 43,263,666(+) AAAAC(C/T)TCATG intron-variant
rs1000540946 -- 43,270,037(+) CCGTG(A/G)ATGAA upstream-variant-2KB
rs1000656845 -- 43,269,845(+) CTCCT(G/T)CCTTT upstream-variant-2KB
rs1000821893 -- 43,271,110(+) TGGGT(A/G)TTGTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for HNRNPKP3 Gene

Variant ID Type Subtype PubMed ID
esv3891972 CNV gain 25118596
nsv554119 CNV gain 21841781

Relevant External Links for HNRNPKP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPKP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HNRNPKP3 Gene

Disorders for HNRNPKP3 Gene

Relevant External Links for HNRNPKP3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HNRNPKP3

No disorders were found for HNRNPKP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPKP3 Gene

Publications for HNRNPKP3 Gene

No publications were found for HNRNPKP3 Gene.

Products for HNRNPKP3 Gene

Sources for HNRNPKP3 Gene

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