Aliases for HNRNPCL4 Gene
External Ids for HNRNPCL4 Gene
- HGNC: 51333
- Entrez Gene: 101060301
- Ensembl: ENSG00000179412
- UniProtKB: P0DMR1
Summaries for HNRNPCL4 Gene
GeneCards Summary for HNRNPCL4 Gene
HNRNPCL4 (Heterogeneous Nuclear Ribonucleoprotein C-Like 4) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is HNRNPCL3.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPCL4 Gene
Genomics for HNRNPCL4 Gene
Regulatory Element Products
Genomic Location for HNRNPCL4 Gene
- Chromosome:
- 1
- Start:
- 13,164,555 bp from pter
- End:
- 13,165,482 bp from pter
- Size:
- 928 bases
- Orientation:
- Minus strand
Genomic View for HNRNPCL4 Gene
Genes around HNRNPCL4 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p36.21 by Ensembl
- 1p36.21 by Entrez Gene
- 1p36.21 by HGNC
HNRNPCL4 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HNRNPCL4 Gene
No data available for Regulatory Elements for HNRNPCL4 Gene
Proteins for HNRNPCL4 Gene
-
Protein details for HNRNPCL4 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P0DMR1-HNRC4_HUMAN
- Recommended name:
- Heterogeneous nuclear ribonucleoprotein C-like 4
- Protein Accession:
- P0DMR1
Protein attributes for HNRNPCL4 Gene
- Size:
- 293 amino acids
- Molecular mass:
- 32029 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for HNRNPCL4 Gene
Other Protein References for HNRNPCL4 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- Search GeneTex for Antibodies for HNRNPCL4
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HNRNPCL4
- Origene Custom Protein Services for HNRNPCL4
- Search GeneTex for Proteins for HNRNPCL4
Assay Products
No data available for DME Specific Peptides for HNRNPCL4 Gene
Domains & Families for HNRNPCL4 Gene
Protein Domains for HNRNPCL4 Gene
- InterPro:
- ProtoNet:
Graphical View of Domain Structure for InterPro Entry
P0DMR1- Family:
-
- Belongs to the RRM HNRPC family. RALY subfamily.
No data available for Gene Families and Suggested Antigen Peptide Sequences for HNRNPCL4 Gene
Function for HNRNPCL4 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003676 | nucleic acid binding | IEA | -- |
| GO:0003723 | RNA binding | IEA | -- |
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HNRNPCL4
CRISPR Products
- Browse CRISPR knockouts for HNRNPCL4
miRNA Products
- Search ViGene Biosciences for HNRNPCL4
Inhibitory RNA Products
- Search ViGene Biosciences for HNRNPCL4
Clone Products
Cell Line Products
- Search ViGene Biosciences for HNRNPCL4
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPCL4 Gene
Localization for HNRNPCL4 Gene
Subcellular locations from UniProtKB/Swiss-Prot for HNRNPCL4 Gene
- Nucleus.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005634 | nucleus | IEA,IBA | -- |
No data available for Subcellular locations from COMPARTMENTS for HNRNPCL4 Gene
Pathways & Interactions for HNRNPCL4 Gene
No data available for Pathways by source and SIGNOR curated interactions for HNRNPCL4 Gene
Transcripts for HNRNPCL4 Gene
mRNA/cDNA for HNRNPCL4 Gene
- (1) REFSEQ mRNAs :
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HNRNPCL4
miRNA Products
- Search ViGene Biosciences for HNRNPCL4
Inhibitory RNA Products
- Search ViGene Biosciences for HNRNPCL4
Clone Products
Flow Cytometry Products
Expression for HNRNPCL4 Gene
NURSA nuclear receptor signaling pathways regulating expression of HNRNPCL4 Gene:
HNRNPCL4Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPCL4 Gene
Orthologs for HNRNPCL4 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | LOC742000 34 |
|
||
| rat (Rattus norvegicus) |
Mammalia | LOC100911576 34 |
|
||
| tropical clawed frog (Silurana tropicalis) |
Amphibia | hnrnpc 34 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | zgc:55733 34 |
|
- Species where no ortholog for HNRNPCL4 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- cow (Bos Taurus)
- dog (Canis familiaris)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- mouse (Mus musculus)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for HNRNPCL4 Gene
Variants for HNRNPCL4 Gene
| SNP ID | Clin | Chr 01 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs200212989 | -- | 13,166,931(-) | ATGCA(C/T)CCACC | upstream-variant-2KB | |
| rs200760611 | -- | 13,167,099(-) | GCTCA(C/T)TGCAA | upstream-variant-2KB | |
| rs200937003 | -- | 13,166,899(-) | ATTAC(A/G)GGCGT | upstream-variant-2KB | |
| rs201088077 | -- | 13,167,338(-) | CTGTC(C/T)GCCTT | upstream-variant-2KB | |
| rs201188748 | -- | 13,166,984(-) | GACAG(A/G)GTTTC | upstream-variant-2KB |
Relevant External Links for HNRNPCL4 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HNRNPCL4
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HNRNPCL4 Gene
Disorders for HNRNPCL4 Gene
Relevant External Links for HNRNPCL4
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- HNRNPCL4
No disorders were found for HNRNPCL4 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPCL4 Gene
Publications for HNRNPCL4 Gene
- The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4 64
Products for HNRNPCL4 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HNRNPCL4
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- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HNRNPCL4
- VectorBuilder custom plasmid, inducible vectors for HNRNPCL4
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HNRNPCL4
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HNRNPCL4 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
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- (122) diseasecard
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- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer