Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HNRNPCL2 Gene

Aliases for HNRNPCL2 Gene

  • Heterogeneous Nuclear Ribonucleoprotein C-Like 2 2 3
  • Heterogeneous Nuclear Ribonucleoprotein C Pseudogene 5 2 3
  • HnRNP C-Like-2 3 4
  • HNRNPCP5 3 4

External Ids for HNRNPCL2 Gene

Previous HGNC Symbols for HNRNPCL2 Gene

  • HNRNPCP5

Summaries for HNRNPCL2 Gene

GeneCards Summary for HNRNPCL2 Gene

HNRNPCL2 (Heterogeneous Nuclear Ribonucleoprotein C-Like 2) is a Protein Coding gene. An important paralog of this gene is HNRNPCL1.

UniProtKB/Swiss-Prot for HNRNPCL2 Gene

  • May play a role in nucleosome assembly by neutralizing basic proteins such as A and B core hnRNPs.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPCL2 Gene

Genomics for HNRNPCL2 Gene

Genomic Location for HNRNPCL2 Gene

Start:
13,115,488 bp from pter
End:
13,116,854 bp from pter
Size:
1,367 bases
Orientation:
Minus strand

Genomic View for HNRNPCL2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HNRNPCL2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPCL2 Gene

No data available for Regulatory Elements for HNRNPCL2 Gene

Proteins for HNRNPCL2 Gene

  • Protein details for HNRNPCL2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B2RXH8-HNRC2_HUMAN
    Recommended name:
    Heterogeneous nuclear ribonucleoprotein C-like 2
    Protein Accession:
    B2RXH8
    Secondary Accessions:
    • B7ZW41

    Protein attributes for HNRNPCL2 Gene

    Size:
    293 amino acids
    Molecular mass:
    32072 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HNRNPCL2 Gene

Proteomics data for HNRNPCL2 Gene at MOPED

Post-translational modifications for HNRNPCL2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for HNRNPCL2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for HNRNPCL2 Gene

Domains for HNRNPCL2 Gene

Protein Domains for HNRNPCL2 Gene

Graphical View of Domain Structure for InterPro Entry

B2RXH8

UniProtKB/Swiss-Prot:

HNRC2_HUMAN :
  • B2RXH8
Domain:
  • Contains 1 RRM (RNA recognition motif) domain.
Family:
  • Belongs to the RRM HNRPC family. RALY subfamily.
genes like me logo Genes that share domains with HNRNPCL2: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for HNRNPCL2 Gene

Function for HNRNPCL2 Gene

Molecular function for HNRNPCL2 Gene

UniProtKB/Swiss-Prot Function: May play a role in nucleosome assembly by neutralizing basic proteins such as A and B core hnRNPs.

Gene Ontology (GO) - Molecular Function for HNRNPCL2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000166 nucleotide binding IEA --
GO:0003676 nucleic acid binding --
GO:0003723 RNA binding IEA --
genes like me logo Genes that share ontologies with HNRNPCL2: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HNRNPCL2 Gene

Localization for HNRNPCL2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for HNRNPCL2 Gene

Nucleus. Note=Component of ribonucleosomes. {ECO:0000250}.

Gene Ontology (GO) - Cellular Components for HNRNPCL2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0030529 ribonucleoprotein complex IEA --
genes like me logo Genes that share ontologies with HNRNPCL2: view

No data available for Subcellular locations from COMPARTMENTS for HNRNPCL2 Gene

Pathways for HNRNPCL2 Gene

SuperPathways for HNRNPCL2 Gene

No Data Available

Interacting Proteins for HNRNPCL2 Gene

Selected Interacting proteins: B2RXH8-HNRC2_HUMAN for HNRNPCL2 Gene via I2D

Symbol External ID(s) Details
HNRNPA1

Gene Ontology (GO) - Biological Process for HNRNPCL2 Gene

None

No data available for Pathways by source for HNRNPCL2 Gene

Transcripts for HNRNPCL2 Gene

mRNA/cDNA for HNRNPCL2 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for HNRNPCL2

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for HNRNPCL2
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPCL2 Gene

No ASD Table

Relevant External Links for HNRNPCL2 Gene

GeneLoc Exon Structure for
HNRNPCL2
ECgene alternative splicing isoforms for
HNRNPCL2

Expression for HNRNPCL2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for HNRNPCL2 Gene

Orthologs for HNRNPCL2 Gene

Evolution for HNRNPCL2 Gene

ENSEMBL:
Gene Tree for HNRNPCL2 (if available)
TreeFam:
Gene Tree for HNRNPCL2 (if available)

No data available for Orthologs for HNRNPCL2 Gene

Paralogs for HNRNPCL2 Gene

Paralogs for HNRNPCL2 Gene

genes like me logo Genes that share paralogs with HNRNPCL2: view

Variants for HNRNPCL2 Gene

Sequence variations from dbSNP and Humsavar for HNRNPCL2 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs2206071 -- 13,116,695(+) AGACA(G/T)GATAT intron-variant
rs2206072 -- 13,116,707(+) GTTCT(A/G)TGCCA intron-variant
rs2206073 -- 13,116,712(+) ATGCC(A/G/T)TCGTA intron-variant
rs2206074 -- 13,116,759(+) GGTCA(C/G)ATGGG intron-variant
rs2884624 -- 13,117,085(-) TTCAT(A/G)AAATG upstream-variant-2KB

Relevant External Links for HNRNPCL2 Gene

HapMap Linkage Disequilibrium report
HNRNPCL2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for HNRNPCL2 Gene

Disorders for HNRNPCL2 Gene

No disorders were found for HNRNPCL2 Gene.

No data available for UniProtKB/Swiss-Prot for HNRNPCL2 Gene

Publications for HNRNPCL2 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. (PMID: 17643375) Jeronimo C. … Coulombe B. (Mol. Cell 2007) 3
  3. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  4. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  5. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3

Products for HNRNPCL2 Gene

Sources for HNRNPCL2 Gene

Back to Top

Content