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Aliases for HNRNPA3P1 Gene

Aliases for HNRNPA3P1 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A3 Pseudogene 1 2 3
  • Heterogeneous Nuclear Ribonucleoprotein A3 2
  • HNRPA3P1 3
  • D10S102 3
  • HNRPA3 3
  • FBRNP 3

External Ids for HNRNPA3P1 Gene

Previous Symbols for HNRNPA3P1 Gene

  • HNRPA3
  • HNRPA3P1

Summaries for HNRNPA3P1 Gene

Entrez Gene Summary for HNRNPA3P1 Gene

  • This locus shares sequence similarity with heterogeneous nuclear ribonuclear proteins and represents an apparent transcribed pseudogene of the HNRPA3 gene, which maps to chromosome 2. [provided by RefSeq, Jul 2008]

GeneCards Summary for HNRNPA3P1 Gene

HNRNPA3P1 (Heterogeneous Nuclear Ribonucleoprotein A3 Pseudogene 1) is a Pseudogene. Among its related pathways are mRNA Splicing - Major Pathway.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPA3P1 Gene

Genomics for HNRNPA3P1 Gene

Genomic Location for HNRNPA3P1 Gene

Start:
43,787,412 bp from pter
End:
43,790,417 bp from pter
Size:
3,006 bases
Orientation:
Minus strand

Genomic View for HNRNPA3P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HNRNPA3P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPA3P1 Gene

Regulatory Elements for HNRNPA3P1 Gene

Proteins for HNRNPA3P1 Gene

Post-translational modifications for HNRNPA3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA3P1 Gene

Domains for HNRNPA3P1 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for HNRNPA3P1 Gene

Function for HNRNPA3P1 Gene

miRNA for HNRNPA3P1 Gene

miRTarBase miRNAs that target HNRNPA3P1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for HNRNPA3P1 Gene

Localization for HNRNPA3P1 Gene

No data available for Gene Ontology (GO) - Cellular Components for HNRNPA3P1 Gene

Pathways for HNRNPA3P1 Gene

SuperPathways for HNRNPA3P1 Gene

Superpath Contained pathways
1 mRNA Splicing - Major Pathway
genes like me logo Genes that share pathways with HNRNPA3P1: view

Pathways by source for HNRNPA3P1 Gene

1 BioSystems pathway for HNRNPA3P1 Gene

Interacting Proteins for HNRNPA3P1 Gene

Gene Ontology (GO) - Biological Process for HNRNPA3P1 Gene

None

Transcripts for HNRNPA3P1 Gene

mRNA/cDNA for HNRNPA3P1 Gene

(2) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HNRNPA3P1 Gene

Heterogeneous nuclear ribonucleoprotein A3 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA3P1 Gene

No ASD Table

Relevant External Links for HNRNPA3P1 Gene

GeneLoc Exon Structure for
HNRNPA3P1
ECgene alternative splicing isoforms for
HNRNPA3P1

Expression for HNRNPA3P1 Gene

mRNA expression in normal human tissues for HNRNPA3P1 Gene

SOURCE GeneReport for Unigene cluster for HNRNPA3P1 Gene Hs.632956

genes like me logo Genes that share expressions with HNRNPA3P1: view

Orthologs for HNRNPA3P1 Gene

Evolution for HNRNPA3P1 Gene

ENSEMBL:
Gene Tree for HNRNPA3P1 (if available)
TreeFam:
Gene Tree for HNRNPA3P1 (if available)

No data available for Orthologs for HNRNPA3P1 Gene

Paralogs for HNRNPA3P1 Gene

No data available for Paralogs for HNRNPA3P1 Gene

Variants for HNRNPA3P1 Gene

Sequence variations from dbSNP and Humsavar for HNRNPA3P1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs852 -- 43,789,381(-) AATTA(C/T)AGTGG nc-transcript-variant
rs853 -- 43,789,352(-) TGGAC(A/C)CATGA nc-transcript-variant
rs854 -- 43,789,425(-) acggt(A/G)gtaac nc-transcript-variant
rs855 -- 43,789,469(-) CGGTG(C/G/T)TGGAG nc-transcript-variant
rs856 -- 43,789,430(-) ttttg(A/G)cggta nc-transcript-variant

Relevant External Links for HNRNPA3P1 Gene

HapMap Linkage Disequilibrium report
HNRNPA3P1

No data available for Structural Variations from Database of Genomic Variants (DGV) for HNRNPA3P1 Gene

Disorders for HNRNPA3P1 Gene

Relevant External Links for HNRNPA3P1

Genetic Association Database (GAD)
HNRNPA3P1
genes like me logo Genes that share disorders with HNRNPA3P1: view

No data available for UniProtKB/Swiss-Prot for HNRNPA3P1 Gene

Publications for HNRNPA3P1 Gene

  1. Identification and characterization of a cDNA, which is highly homologous to the ribonucleoprotein gene, from a locus (D10S102) closely linked to MEN2 (multiple endocrine neoplasia type 2). (PMID: 8101480) Takiguchi S. … Nakamura Y. (Cytogenet. Cell Genet. 1993) 2 3
  2. Heterogeneous nuclear ribonucleoprotein A3, a novel RNA trafficking response element-binding protein. (PMID: 11886857) Ma A.S.W. … Smith R. (J. Biol. Chem. 2002) 3
  3. HnRNP A3 genes and pseudogenes in the vertebrate genomes. (PMID: 15776420) Makeyev A.V. … Bayarsaihan D. (J. Exp. Zoolog. Part A Comp. Exp. Biol. 2005) 3
  4. Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. (PMID: 17643375) Jeronimo C. … Coulombe B. (Mol. Cell 2007) 3
  5. Network organization of the human autophagy system. (PMID: 20562859) Behrends C. … Harper J.W. (Nature 2010) 3

Products for HNRNPA3P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate HNRNPA3P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for HNRNPA3P1
    • Block miRNA regulation of HNRNPA3P1 using miScript Target Protectors

    Sources for HNRNPA3P1 Gene

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