Aliases for HNRNPA1P48 Gene
External Ids for HNRNPA1P48 Gene
- HGNC: 48778
- Entrez Gene: 642659
- Ensembl: ENSG00000224578
Summaries for HNRNPA1P48 Gene
GeneCards Summary for HNRNPA1P48 Gene
HNRNPA1P48 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 48) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPA1P48 Gene
Genomics for HNRNPA1P48 Gene
Regulatory Elements for HNRNPA1P48 Gene
Enhancers for HNRNPA1P48 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH16G051197 | 1 | VISTA | 22.3 | -447.9 | -447926 | 1.2 | ZFP64 ZNF140 ZNF266 ZNF101 ZNF697 ZNF664 ZNF791 ZNF138 ZNF19 ZNF426 | HNRNPA1P48 ENSG00000280344 ENSG00000261047 |
| GH16G052572 | 1.2 | ENCODE dbSUPER | 12.2 | +927.9 | 927920 | 2.9 | HNRNPUL1 PKNOX1 FOXA2 ATF1 MLX ARID4B DMAP1 YY1 SLC30A9 SP5 | HNRNPA1P48 TOX3 LOC105371265 |
| GH16G050676 | 0.5 | dbSUPER | 10 | -971.2 | -971151 | 0.5 | ZNF266 ZNF426 ZNF781 ZNF697 | HNRNPA1P48 SNX20 LOC101927272 |
| GH16G051636 | 1.8 | VISTA FANTOM5 Ensembl ENCODE | 0.4 | -8.3 | -8275 | 1.7 | CTCF TEAD4 ZNF843 ETS1 HDAC2 POLR2A BCL11A GLIS1 CTBP2 POU5F1 | SALL1 HNRNPA1P48 PIR35026 |
| GH16G051556 | 1.2 | Ensembl ENCODE | 0.2 | -88.7 | -88710 | 1.6 | ARNT FEZF1 ZNF2 GLIS2 FOS TSHZ1 ZNF488 TBX21 ZNF518A SMARCA4 | SALL1 PIR35026 HNRNPA1P48 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HNRNPA1P48 on UCSC Golden Path with GeneCards custom track
Promoters for HNRNPA1P48 Gene
| Ensembl Regulatory Elements (ENSRs) | TSS Distance (bp) | Size (bp) | Binding Sites for Transcription Factors within promoters |
|---|---|---|---|
| ENSR00000085905 | 445 | 799 |
Regulatory Element Products
Genomic Location for HNRNPA1P48 Gene
- Chromosome:
- 16
- Start:
- 51,645,756 bp from pter
- End:
- 51,647,132 bp from pter
- Size:
- 1,377 bases
- Orientation:
- Plus strand
Genomic View for HNRNPA1P48 Gene
Genes around HNRNPA1P48 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16q12.1 by Ensembl
- 16q12.1 by Entrez Gene
- 16q12.1 by HGNC
HNRNPA1P48 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HNRNPA1P48 Gene
Proteins for HNRNPA1P48 Gene
Post-translational modifications for HNRNPA1P48 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HNRNPA1P48
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HNRNPA1P48
- Origene Custom Protein Services for HNRNPA1P48
- Search GeneTex for Proteins for HNRNPA1P48
Assay Products
No data available for DME Specific Peptides for HNRNPA1P48 Gene
Domains & Families for HNRNPA1P48 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HNRNPA1P48 Gene
Function for HNRNPA1P48 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HNRNPA1P48
CRISPR Products
- Browse CRISPR knockouts for HNRNPA1P48
miRNA Products
- Search ViGene Biosciences for HNRNPA1P48
Inhibitory RNA Products
- Search ViGene Biosciences for HNRNPA1P48
Cell Line Products
- Search ViGene Biosciences for HNRNPA1P48
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P48 Gene
Localization for HNRNPA1P48 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HNRNPA1P48 Gene
Transcripts for HNRNPA1P48 Gene
mRNA/cDNA for HNRNPA1P48 Gene
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HNRNPA1P48
miRNA Products
- Search ViGene Biosciences for HNRNPA1P48
Inhibitory RNA Products
- Search ViGene Biosciences for HNRNPA1P48
Flow Cytometry Products
Relevant External Links for HNRNPA1P48 Gene
- GeneLoc Exon Structure for
- HNRNPA1P48
- ECgene alternative splicing isoforms for
- HNRNPA1P48
Expression for HNRNPA1P48 Gene
NURSA nuclear receptor signaling pathways regulating expression of HNRNPA1P48 Gene:
HNRNPA1P48
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA1P48 Gene
Orthologs for HNRNPA1P48 Gene
Evolution for HNRNPA1P48 Gene
- ENSEMBL:
- Gene Tree for HNRNPA1P48 (if available)
- TreeFam:
- Gene Tree for HNRNPA1P48 (if available)
No data available for Orthologs for HNRNPA1P48 Gene
Paralogs for HNRNPA1P48 Gene
No data available for Paralogs for HNRNPA1P48 Gene
Variants for HNRNPA1P48 Gene
Relevant External Links for HNRNPA1P48 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HNRNPA1P48
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HNRNPA1P48 Gene
Disorders for HNRNPA1P48 Gene
No disorders were found for HNRNPA1P48 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HNRNPA1P48 Gene
Publications for HNRNPA1P48 Gene
- cDNA cloning of human hnRNP protein A1 reveals the existence of multiple mRNA isoforms. (PMID: 2836799) Buvoli M. … Horandi C. (Nucleic Acids Res. 1988) 3 64
Products for HNRNPA1P48 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HNRNPA1P48
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- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HNRNPA1P48
- VectorBuilder custom plasmid, inducible vectors for HNRNPA1P48
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HNRNPA1P48
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HNRNPA1P48 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
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- (122) diseasecard
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- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer