Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HNRNPA1P40 Gene

Subcategory (RNA class) for HNRNPA1P40 Gene

antisense

Aliases for HNRNPA1P40 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 40 2 3 5

External Ids for HNRNPA1P40 Gene

ORGUL Members for HNRNPA1P40 Gene

Previous GeneCards Identifiers for HNRNPA1P40 Gene

  • GC11P074067

Summaries for HNRNPA1P40 Gene

GeneCards Summary for HNRNPA1P40 Gene

HNRNPA1P40 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 40) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPA1P40 Gene

Genomics for HNRNPA1P40 Gene

Regulatory Elements for HNRNPA1P40 Gene

Enhancers for HNRNPA1P40 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G074339 0.4 ENCODE 9.2 -15.3 -15273 0.1 HNF4A ENSG00000206913 KCNE3 P4HA3 HNRNPA1P40 LOC105369385
GH11G074370 0.8 ENCODE 0.4 +17.0 16964 2.8 ZSCAN5A INSM2 FEZF1 ZKSCAN1 CTBP1 GATA3 GLI2 FOSL2 ZNF600 FOS ENSG00000254631 PGM2L1 KCNE3 ENSG00000206913 ENSG00000254928 P4HA3 LOC100421622 ARRB1 HNRNPA1P40
GH11G074388 0.7 ENCODE 0.3 +34.4 34388 0.2 CTCF CHD7 RAD21 GATA3 ZNF366 ZNF143 SMC3 ZNF600 MIXL1 ZNF654 ENSG00000254631 HNRNPA1P40
GH11G074389 0.7 Ensembl 0.3 +34.7 34658 0.2 CTCF TRIM22 CHD7 RAD21 GATA3 ZNF366 KLF16 TARDBP ZNF143 HMBOX1 ENSG00000254631 HNRNPA1P40
GH11G074366 0.4 ENCODE 0.4 +12.4 12446 1.0 TEAD4 PGM2L1 ENSG00000254631 ENSG00000206913 P4HA3 HNRNPA1P40
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HNRNPA1P40 on UCSC Golden Path with GeneCards custom track

Genomic Location for HNRNPA1P40 Gene

Chromosome:
11
Start:
74,354,443 bp from pter
End:
74,355,720 bp from pter
Size:
1,278 bases
Orientation:
Plus strand

Genomic View for HNRNPA1P40 Gene

Genes around HNRNPA1P40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA1P40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA1P40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPA1P40 Gene

Proteins for HNRNPA1P40 Gene

Post-translational modifications for HNRNPA1P40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA1P40 Gene

Domains & Families for HNRNPA1P40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HNRNPA1P40 Gene

Function for HNRNPA1P40 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P40 Gene

Localization for HNRNPA1P40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HNRNPA1P40 Gene

Pathways & Interactions for HNRNPA1P40 Gene

SuperPathways for HNRNPA1P40 Gene

No Data Available

Interacting Proteins for HNRNPA1P40 Gene

Gene Ontology (GO) - Biological Process for HNRNPA1P40 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPA1P40 Gene

Drugs & Compounds for HNRNPA1P40 Gene

No Compound Related Data Available

Transcripts for HNRNPA1P40 Gene

mRNA/cDNA for HNRNPA1P40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA1P40 Gene

No ASD Table

Relevant External Links for HNRNPA1P40 Gene

GeneLoc Exon Structure for
HNRNPA1P40
ECgene alternative splicing isoforms for
HNRNPA1P40

Expression for HNRNPA1P40 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HNRNPA1P40 Gene

mRNA differential expression in normal tissues according to GTEx for HNRNPA1P40 Gene

This gene is overexpressed in Thyroid (x25.6).

NURSA nuclear receptor signaling pathways regulating expression of HNRNPA1P40 Gene:

HNRNPA1P40
genes like me logo Genes that share expression patterns with HNRNPA1P40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA1P40 Gene

Orthologs for HNRNPA1P40 Gene

Evolution for HNRNPA1P40 Gene

ENSEMBL:
Gene Tree for HNRNPA1P40 (if available)
TreeFam:
Gene Tree for HNRNPA1P40 (if available)

No data available for Orthologs for HNRNPA1P40 Gene

Paralogs for HNRNPA1P40 Gene

No data available for Paralogs for HNRNPA1P40 Gene

Variants for HNRNPA1P40 Gene

Relevant External Links for HNRNPA1P40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA1P40

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HNRNPA1P40 Gene

Disorders for HNRNPA1P40 Gene

No disorders were found for HNRNPA1P40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HNRNPA1P40 Gene

Publications for HNRNPA1P40 Gene

No publications were found for HNRNPA1P40 Gene.

Products for HNRNPA1P40 Gene

Sources for HNRNPA1P40 Gene

Content
Loading form....