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Aliases for HNRNPA1P33 Gene

Aliases for HNRNPA1P33 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 33 2 3 5

External Ids for HNRNPA1P33 Gene

Previous GeneCards Identifiers for HNRNPA1P33 Gene

  • GC10M047135

Summaries for HNRNPA1P33 Gene

GeneCards Summary for HNRNPA1P33 Gene

HNRNPA1P33 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 33) is a Pseudogene.

Additional gene information for HNRNPA1P33 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPA1P33 Gene

Genomics for HNRNPA1P33 Gene

GeneHancer (GH) Regulatory Elements for HNRNPA1P33 Gene

Promoters and enhancers for HNRNPA1P33 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I046282 Enhancer 1.4 Ensembl ENCODE dbSUPER 6.2 -131.9 -131852 3.2 ATF1 SIN3A ZNF2 GLIS2 E2F8 KLF7 ATF7 RUNX3 ZNF202 SP3 GC10P046284 LOC105378577 PARGP1 BMS1P1 WASHC2C ANTXRLP1 AGAP4 AGAP10P ANTXRL HNRNPA1P33
GH10I046417 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.8 +3.9 3911 3.7 SIN3A RAD21 YY1 ZNF366 EGR1 SCRT2 RCOR1 DEK EGR2 RXRA NPY4R SYT15 HNRNPA1P33 ANXA8L1 LINC00842 PIR43306
GH10I046455 Enhancer 1 FANTOM5 ENCODE 0.3 +40.2 40248 0.3 ATF1 JUN SIN3A FOSL1 MTA3 ZNF143 SMARCC2 FOSL2 FOS TCF7L2 PIR43306 HNRNPA1P33 ANXA8L1 LINC00842
GH10I046408 Enhancer 0.6 ENCODE 0.4 -6.8 -6791 0.9 ZNF174 USF1 ZNF521 TAL1 CBFA2T3 USF2 GTF2A2 FOSL1 MITF NFIC HNRNPA1P33 PIR31302 LINC00842 ANXA8L1
GH10I046440 Enhancer 0.8 ENCODE 0.3 +26.1 26100 2.1 SMAD1 NFIB KLF17 BATF TCF12 GLIS2 GATA2 EGR1 EGR2 ZNF398 AGAP4 LOC105378289 PARGP1 LINC00842 PIR43306 HNRNPA1P33 ANXA8L1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HNRNPA1P33 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HNRNPA1P33 Gene

Genomic Locations for HNRNPA1P33 Gene
chr10:46,415,853-46,416,456
(GRCh38/hg38)
Size:
604 bases
Orientation:
Plus strand
chr10:47,133,295-47,133,898
(GRCh37/hg19)

Genomic View for HNRNPA1P33 Gene

Genes around HNRNPA1P33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA1P33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA1P33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPA1P33 Gene

Proteins for HNRNPA1P33 Gene

Post-translational modifications for HNRNPA1P33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA1P33 Gene

Domains & Families for HNRNPA1P33 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HNRNPA1P33 Gene

Function for HNRNPA1P33 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P33 Gene

Localization for HNRNPA1P33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPA1P33 Gene

Pathways & Interactions for HNRNPA1P33 Gene

SuperPathways for HNRNPA1P33 Gene

No Data Available

Interacting Proteins for HNRNPA1P33 Gene

Gene Ontology (GO) - Biological Process for HNRNPA1P33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPA1P33 Gene

Drugs & Compounds for HNRNPA1P33 Gene

No Compound Related Data Available

Transcripts for HNRNPA1P33 Gene

mRNA/cDNA for HNRNPA1P33 Gene

(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HNRNPA1P33 Gene

Heterogeneous nuclear ribonucleoprotein A1 pseudogene 33:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA1P33 Gene

No ASD Table

Relevant External Links for HNRNPA1P33 Gene

GeneLoc Exon Structure for
HNRNPA1P33
ECgene alternative splicing isoforms for
HNRNPA1P33

Expression for HNRNPA1P33 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HNRNPA1P33 Gene

mRNA differential expression in normal tissues according to GTEx for HNRNPA1P33 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x13.0), Skin - Sun Exposed (Lower leg) (x9.9), and Esophagus - Mucosa (x9.5).

NURSA nuclear receptor signaling pathways regulating expression of HNRNPA1P33 Gene:

HNRNPA1P33

SOURCE GeneReport for Unigene cluster for HNRNPA1P33 Gene:

Hs.711067
genes like me logo Genes that share expression patterns with HNRNPA1P33: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA1P33 Gene

Orthologs for HNRNPA1P33 Gene

Evolution for HNRNPA1P33 Gene

ENSEMBL:
Gene Tree for HNRNPA1P33 (if available)
TreeFam:
Gene Tree for HNRNPA1P33 (if available)

No data available for Orthologs for HNRNPA1P33 Gene

Paralogs for HNRNPA1P33 Gene

No data available for Paralogs for HNRNPA1P33 Gene

Variants for HNRNPA1P33 Gene

Sequence variations from dbSNP and Humsavar for HNRNPA1P33 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs111364575 -- 46,416,899(+) A/G downstream_transcript_variant
rs111911933 -- 46,415,739(+) A/G upstream_transcript_variant
rs111913820 -- 46,415,147(+) G/A upstream_transcript_variant
rs111959357 -- 46,416,381(+) C/T non_coding_transcript_variant
rs112090575 -- 46,414,555(+) CCCC/CCCCCC upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for HNRNPA1P33 Gene

Variant ID Type Subtype PubMed ID
dgv1106n54 CNV gain 21841781
dgv118e214 CNV gain 21293372
dgv147n67 CNV gain 20364138
dgv148n67 CNV gain 20364138
dgv218e212 CNV loss 25503493
dgv219e212 CNV gain 25503493
dgv223e212 CNV loss 25503493
dgv227e212 CNV loss 25503493
dgv22e55 CNV gain 17911159
dgv409e59 CNV duplication 20981092
dgv416e59 CNV duplication 20981092
dgv440n106 CNV duplication 24896259
dgv738n100 CNV loss 25217958
dgv740n100 CNV gain+loss 25217958
dgv743n100 CNV gain 25217958
dgv752n100 CNV loss 25217958
dgv753n100 CNV gain 25217958
dgv764n100 CNV loss 25217958
dgv765n100 CNV loss 25217958
dgv767n100 CNV gain 25217958
dgv781n100 CNV loss 25217958
dgv783n100 CNV gain 25217958
dgv801n100 CNV gain 25217958
dgv803n100 CNV gain 25217958
dgv807n100 CNV gain 25217958
dgv812n100 CNV loss 25217958
dgv813n100 CNV loss 25217958
dgv817n100 CNV loss 25217958
dgv818n100 CNV loss 25217958
dgv819n100 CNV gain+loss 25217958
dgv821n100 CNV gain 25217958
dgv822n100 CNV loss 25217958
esv2632472 CNV gain 19546169
esv2736152 CNV deletion 23290073
esv2857124 CNV duplication 24192839
esv3577105 CNV gain 25503493
esv3578852 CNV loss 25503493
esv3578853 CNV loss 25503493
esv3891799 CNV gain 25118596
nsv1041060 CNV gain+loss 25217958
nsv1044044 CNV gain+loss 25217958
nsv1047088 CNV loss 25217958
nsv1050225 CNV gain+loss 25217958
nsv1052733 CNV loss 25217958
nsv1152446 CNV duplication 26484159
nsv550723 CNV gain 21841781
nsv550726 CNV loss 21841781
nsv820817 CNV duplication 20802225
nsv831853 CNV gain 17160897
nsv947930 CNV duplication 23825009
nsv951576 CNV duplication 24416366

Additional Variant Information for HNRNPA1P33 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA1P33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HNRNPA1P33 Gene

Disorders for HNRNPA1P33 Gene

Additional Disease Information for HNRNPA1P33

No disorders were found for HNRNPA1P33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPA1P33 Gene

Publications for HNRNPA1P33 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
  2. cDNA cloning of human hnRNP protein A1 reveals the existence of multiple mRNA isoforms. (PMID: 2836799) Buvoli M … Morandi C (Nucleic acids research 1988) 3 58
  3. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for HNRNPA1P33 Gene

Sources for HNRNPA1P33 Gene

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