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HNRNPA1P10 Gene(Pseudogene)

Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 10

GCID:
GC19M011665
GIFtS:
19
Genes Participants
UDN Logo

Aliases for HNRNPA1P10 Gene

Aliases for HNRNPA1P10 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 10 2 3 5
  • HNRPA1L-2 3
  • HnRNP A1 3

External Ids for HNRNPA1P10 Gene

Previous GeneCards Identifiers for HNRNPA1P10 Gene

  • GC19M011778

Summaries for HNRNPA1P10 Gene

GeneCards Summary for HNRNPA1P10 Gene

HNRNPA1P10 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPA1P10 Gene

Genomics for HNRNPA1P10 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HNRNPA1P10 Gene

Enhancers for HNRNPA1P10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G011531 1.5 FANTOM5 Ensembl ENCODE 33.9 +134.7 134651 1.6 PKNOX1 ATF1 ZNF493 ZFP64 FOS ZNF263 ZNF202 REST ZNF623 ZNF518A ZNF844 ZNF136 ZNF627 ZNF442 ZNF625 ZNF441 ZNF491 ZNF788 HNRNPA1P10 ZNF709
GH19G011317 1.4 Ensembl ENCODE 33.8 +345.2 345207 8.6 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D ENSG00000267174 ZNF136 ZNF844 ZNF627 ZNF625 ZNF441 ZNF491 HNRNPA1P10 TSPAN16 ZNF44
GH19G011420 1.3 Ensembl ENCODE 33.9 +245.4 245397 2.8 PKNOX1 ZFP64 SIN3A DMAP1 FOS SP3 REST ZNF610 SMARCA4 GLIS1 ZNF136 ZNF844 ZNF627 ZNF442 ZNF625 ZNF441 ZNF491 ZNF788 HNRNPA1P10 ZNF44
GH19G012609 1.8 FANTOM5 Ensembl ENCODE 15.1 -945.3 -945272 4.8 CREB3L1 MLX ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ZNF136 ZNF700 ZNF564 C19orf43 WDR83OS ZNF799 ZNF44 HNRNPA1P10 ZNF791 JUNB
GH19G010875 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +789.0 789017 4.9 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARNT WRNIP1 ARID4B DMAP1 YY1 ZNF627 C19orf38 HNRNPA1P10 SMARCA4 ZNF439 ZNF823 DNMT1 CARM1 PIR43209
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HNRNPA1P10 on UCSC Golden Path with GeneCards custom track

Promoters for HNRNPA1P10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000107217 288 799

Genomic Location for HNRNPA1P10 Gene

Chromosome:
19
Start:
11,665,736 bp from pter
End:
11,667,089 bp from pter
Size:
1,354 bases
Orientation:
Minus strand

Genomic View for HNRNPA1P10 Gene

Genes around HNRNPA1P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA1P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA1P10 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HNRNPA1P10 Gene

Proteins for HNRNPA1P10 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HNRNPA1P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA1P10 Gene

Domains & Families for HNRNPA1P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HNRNPA1P10 Gene

Function for HNRNPA1P10 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P10 Gene

Localization for HNRNPA1P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HNRNPA1P10 Gene

Pathways & Interactions for HNRNPA1P10 Gene

SuperPathways for HNRNPA1P10 Gene

PathCards logo More details on SuperPathways for HNRNPA1P10
No Data Available

Interacting Proteins for HNRNPA1P10 Gene

Gene Ontology (GO) - Biological Process for HNRNPA1P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPA1P10 Gene

Drugs & Compounds for HNRNPA1P10 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HNRNPA1P10 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HNRNPA1P10 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HNRNPA1P10 Gene

Heterogeneous nuclear ribonucleoprotein A1 pseudogene 10:
Representative Sequences:

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA1P10 Gene

No ASD Table

Relevant External Links for HNRNPA1P10 Gene

GeneLoc Exon Structure for
HNRNPA1P10
ECgene alternative splicing isoforms for
HNRNPA1P10

Expression for HNRNPA1P10 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HNRNPA1P10 Gene

mRNA expression in normal human tissues for HNRNPA1P10 Gene
mRNA expression by BioGPS for HNRNPA1P10 GenemRNA expression by GTEx for HNRNPA1P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of HNRNPA1P10 Gene:

HNRNPA1P10

SOURCE GeneReport for Unigene cluster for HNRNPA1P10 Gene:

Hs.534822
genes like me logo Genes that share expression patterns with HNRNPA1P10: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA1P10 Gene

Orthologs for HNRNPA1P10 Gene

Evolution for HNRNPA1P10 Gene

ENSEMBL:
Gene Tree for HNRNPA1P10 (if available)
TreeFam:
Gene Tree for HNRNPA1P10 (if available)

No data available for Orthologs for HNRNPA1P10 Gene

Paralogs for HNRNPA1P10 Gene

No data available for Paralogs for HNRNPA1P10 Gene

Variants for HNRNPA1P10 Gene

Sequence variations from dbSNP and Humsavar for HNRNPA1P10 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000680680 -- 11,668,199(+) AGAAT(A/G)GTGTG upstream-variant-2KB
rs1001427627 -- 11,668,241(+) GATAG(C/T)GCCAC upstream-variant-2KB
rs1003510482 -- 11,667,230(+) TCAGC(C/G)ACCCC upstream-variant-2KB
rs1003626737 -- 11,665,914(+) TTTTT(G/T)GCCCA nc-transcript-variant
rs1004346067 -- 11,667,023(+) CTGAC(C/T)TAGAC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for HNRNPA1P10 Gene

Variant ID Type Subtype PubMed ID
nsv509721 CNV insertion 20534489
nsv525966 CNV gain 19592680
nsv960787 CNV duplication 23825009

Relevant External Links for HNRNPA1P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA1P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HNRNPA1P10 Gene

Disorders for HNRNPA1P10 Gene

Relevant External Links for HNRNPA1P10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HNRNPA1P10

No disorders were found for HNRNPA1P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPA1P10 Gene

Publications for HNRNPA1P10 Gene

  1. RNA-binding proteins heterogeneous nuclear ribonucleoprotein A1, E1, and K are involved in post-transcriptional control of collagen I and III synthesis. (PMID: 15514164) Thiele B.J. … Regitz-Zagrosek V. (Circ. Res. 2004) 3 64
  2. Construction of a human full-length cDNA bank. (PMID: 7821789) Kato S. … Aoki T. (Gene 1994) 3 64
  3. cDNA cloning of human hnRNP protein A1 reveals the existence of multiple mRNA isoforms. (PMID: 2836799) Buvoli M. … Horandi C. (Nucleic Acids Res. 1988) 3 64

Products for HNRNPA1P10 Gene

Sources for HNRNPA1P10 Gene

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