Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HNRNPA1P10 Gene

Aliases for HNRNPA1P10 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 10 2 3 5
  • HNRPA1L-2 3
  • HnRNP A1 3

External Ids for HNRNPA1P10 Gene

Previous GeneCards Identifiers for HNRNPA1P10 Gene

  • GC19M011778

Summaries for HNRNPA1P10 Gene

GeneCards Summary for HNRNPA1P10 Gene

HNRNPA1P10 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 10) is a Pseudogene.

Additional gene information for HNRNPA1P10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPA1P10 Gene

Genomics for HNRNPA1P10 Gene

GeneHancer (GH) Regulatory Elements for HNRNPA1P10 Gene

Promoters and enhancers for HNRNPA1P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I011666 Promoter 0.5 Ensembl 550.8 +0.3 288 0.8 HNRNPA1P10 ACP5 PIR37876 ENSG00000197332
GH19I011531 Enhancer 1.4 FANTOM5 Ensembl ENCODE 42.8 +134.7 134651 1.6 PKNOX1 ATF1 ZNF493 ZFP64 ZNF213 FOS ZNF202 ZC3H11A REST ZNF623 ZNF627 ILF3 ZNF136 ZNF442 ZNF844 ZNF625 KRI1 ZNF44 ZNF441 ZNF709
GH19I010870 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 18.7 +795.1 795081 3.1 HDGF ARNT DMAP1 ZNF2 POLR2B ZNF143 KLF13 SP3 SP5 ZNF592 CARM1 ZNF439 ZNF627 RAVER1 HNRNPA1P10 KRI1 ILF3 ZNF491 ZNF441 PRKCSH
GH19I011596 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 18.9 +69.6 69588 2.5 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF627 ZNF136 ZNF20 ZNF564 ZNF700 ZNF44 ILF3 ZNF799 ZNF763 PRKCSH
GH19I012609 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE 15.1 -945.3 -945272 4.8 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 IRF4 ZNF490 ZNF791 PIR37932 ZNF136 ZNF44 ZNF20 ZNF700 ZNF799 ZNF442 ZNF844
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HNRNPA1P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HNRNPA1P10 Gene

Genomic Locations for HNRNPA1P10 Gene
chr19:11,665,736-11,667,089
(GRCh38/hg38)
Size:
1,354 bases
Orientation:
Minus strand
chr19:11,776,551-11,777,904
(GRCh37/hg19)

Genomic View for HNRNPA1P10 Gene

Genes around HNRNPA1P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA1P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA1P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPA1P10 Gene

Proteins for HNRNPA1P10 Gene

Post-translational modifications for HNRNPA1P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA1P10 Gene

Domains & Families for HNRNPA1P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HNRNPA1P10 Gene

Function for HNRNPA1P10 Gene

Phenotypes From GWAS Catalog for HNRNPA1P10 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P10 Gene

Localization for HNRNPA1P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HNRNPA1P10 Gene

Pathways & Interactions for HNRNPA1P10 Gene

SuperPathways for HNRNPA1P10 Gene

No Data Available

Interacting Proteins for HNRNPA1P10 Gene

Gene Ontology (GO) - Biological Process for HNRNPA1P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPA1P10 Gene

Drugs & Compounds for HNRNPA1P10 Gene

No Compound Related Data Available

Transcripts for HNRNPA1P10 Gene

mRNA/cDNA for HNRNPA1P10 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HNRNPA1P10 Gene

Heterogeneous nuclear ribonucleoprotein A1 pseudogene 10:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA1P10 Gene

No ASD Table

Relevant External Links for HNRNPA1P10 Gene

GeneLoc Exon Structure for
HNRNPA1P10
ECgene alternative splicing isoforms for
HNRNPA1P10

Expression for HNRNPA1P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HNRNPA1P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of HNRNPA1P10 Gene:

HNRNPA1P10

SOURCE GeneReport for Unigene cluster for HNRNPA1P10 Gene:

Hs.534822
genes like me logo Genes that share expression patterns with HNRNPA1P10: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HNRNPA1P10 Gene

Orthologs for HNRNPA1P10 Gene

Evolution for HNRNPA1P10 Gene

ENSEMBL:
Gene Tree for HNRNPA1P10 (if available)
TreeFam:
Gene Tree for HNRNPA1P10 (if available)

No data available for Orthologs for HNRNPA1P10 Gene

Paralogs for HNRNPA1P10 Gene

No data available for Paralogs for HNRNPA1P10 Gene

Variants for HNRNPA1P10 Gene

Sequence variations from dbSNP and Humsavar for HNRNPA1P10 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000680680 -- 11,668,199(-) G/A upstream_transcript_variant
rs1001427627 -- 11,668,241(-) T/C upstream_transcript_variant
rs1003510482 -- 11,667,230(-) C/G upstream_transcript_variant
rs1003626737 -- 11,665,914(-) T/G non_coding_transcript_variant
rs1004346067 -- 11,667,023(-) T/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for HNRNPA1P10 Gene

Variant ID Type Subtype PubMed ID
nsv509721 CNV insertion 20534489
nsv525966 CNV gain 19592680
nsv960787 CNV duplication 23825009

Additional Variant Information for HNRNPA1P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA1P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HNRNPA1P10 Gene

Disorders for HNRNPA1P10 Gene

Additional Disease Information for HNRNPA1P10

No disorders were found for HNRNPA1P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPA1P10 Gene

Publications for HNRNPA1P10 Gene

  1. RNA-binding proteins heterogeneous nuclear ribonucleoprotein A1, E1, and K are involved in post-transcriptional control of collagen I and III synthesis. (PMID: 15514164) Thiele BJ … Regitz-Zagrosek V (Circulation research 2004) 3 58
  2. Construction of a human full-length cDNA bank. (PMID: 7821789) Kato S … Aoki T (Gene 1994) 3 58
  3. cDNA cloning of human hnRNP protein A1 reveals the existence of multiple mRNA isoforms. (PMID: 2836799) Buvoli M … Morandi C (Nucleic acids research 1988) 3 58

Products for HNRNPA1P10 Gene

Sources for HNRNPA1P10 Gene

Content
Loading form....