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Aliases for HNRNPA1P10 Gene

Aliases for HNRNPA1P10 Gene

  • Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 10 2 3 5
  • HNRPA1L-2 3
  • HnRNP A1 3

External Ids for HNRNPA1P10 Gene

Previous GeneCards Identifiers for HNRNPA1P10 Gene

  • GC19M011778

Summaries for HNRNPA1P10 Gene

GeneCards Summary for HNRNPA1P10 Gene

HNRNPA1P10 (Heterogeneous Nuclear Ribonucleoprotein A1 Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HNRNPA1P10 Gene

Genomics for HNRNPA1P10 Gene

Regulatory Elements for HNRNPA1P10 Gene

Enhancers for HNRNPA1P10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F011531 1.5 FANTOM5 Ensembl ENCODE 33.9 +134.7 134651 1.6 PKNOX1 ATF1 ZFP64 ZNF493 FOS ZNF202 ZNF263 REST ZNF518A ZNF623 ZNF627 ZNF136 ZNF844 ZNF442 ZNF625 ZNF44 ZNF799 ZNF441 ZNF491 ZNF700
GH19F011420 1.1 Ensembl ENCODE 33.9 +245.2 245246 3.1 ATF1 PKNOX1 ZNF493 ZFP64 SIN3A DMAP1 ZNF48 ETS1 ZNF121 GLIS2 ZNF627 ZNF136 ZNF442 ZNF844 ZNF625 ZNF44 ZNF799 ZNF763 ZNF441 ZNF491
GH19F011317 0.5 Ensembl ENCODE 33.8 +345.4 345407 9.0 CREB3L1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D ZNF627 ZNF136 ZNF844 ZNF625 ENSG00000267174 ZNF44 ZNF441 ZNF491 ZNF700 ZNF763
GH19F010746 1.4 FANTOM5 Ensembl ENCODE 25.5 +909.9 909876 20.8 MLX DMAP1 YY1 SLC30A9 ZNF143 ZNF263 MCM3 SP3 NFYC TBX21 FBXL12 HNRNPA1P10 SLC44A2 CDKN2D ZNF627 RAVER1 DNM2 KRI1 MIR638 PRKCSH
GH19F010717 0.8 FANTOM5 ENCODE 18.8 +947.9 947934 3.7 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 ZNF2 YY1 FBXL12 EIF3G DOCK6 ZNF627 LOC100419831 RAVER1 S1PR2 HNRNPA1P10 KANK2 SLC44A2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HNRNPA1P10 on UCSC Golden Path with GeneCards custom track

Promoters for HNRNPA1P10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001816091 388 999 GATAD2A HMG20B ZNF792 SP5 HMG20A ZNF644 ZSCAN9 KMT2B RARA SLC30A9

Genomic Location for HNRNPA1P10 Gene

Chromosome:
19
Start:
11,665,736 bp from pter
End:
11,667,089 bp from pter
Size:
1,354 bases
Orientation:
Minus strand

Genomic View for HNRNPA1P10 Gene

Genes around HNRNPA1P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HNRNPA1P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HNRNPA1P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HNRNPA1P10 Gene

Proteins for HNRNPA1P10 Gene

Post-translational modifications for HNRNPA1P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HNRNPA1P10 Gene

Domains & Families for HNRNPA1P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HNRNPA1P10 Gene

Function for HNRNPA1P10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HNRNPA1P10 Gene

Localization for HNRNPA1P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HNRNPA1P10 Gene

Pathways & Interactions for HNRNPA1P10 Gene

SuperPathways for HNRNPA1P10 Gene

No Data Available

Interacting Proteins for HNRNPA1P10 Gene

Gene Ontology (GO) - Biological Process for HNRNPA1P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HNRNPA1P10 Gene

Transcripts for HNRNPA1P10 Gene

mRNA/cDNA for HNRNPA1P10 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for HNRNPA1P10 Gene

Heterogeneous nuclear ribonucleoprotein A1 pseudogene 10:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for HNRNPA1P10 Gene

No ASD Table

Relevant External Links for HNRNPA1P10 Gene

GeneLoc Exon Structure for
HNRNPA1P10
ECgene alternative splicing isoforms for
HNRNPA1P10

Expression for HNRNPA1P10 Gene

mRNA expression in normal human tissues for HNRNPA1P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of HNRNPA1P10 Gene:

HNRNPA1P10

SOURCE GeneReport for Unigene cluster for HNRNPA1P10 Gene:

Hs.534822
genes like me logo Genes that share expression patterns with HNRNPA1P10: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HNRNPA1P10 Gene

Orthologs for HNRNPA1P10 Gene

Evolution for HNRNPA1P10 Gene

ENSEMBL:
Gene Tree for HNRNPA1P10 (if available)
TreeFam:
Gene Tree for HNRNPA1P10 (if available)

No data available for Orthologs for HNRNPA1P10 Gene

Paralogs for HNRNPA1P10 Gene

No data available for Paralogs for HNRNPA1P10 Gene

Variants for HNRNPA1P10 Gene

Sequence variations from dbSNP and Humsavar for HNRNPA1P10 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1056727 -- 11,666,239(-) TTTGG(C/G/T)AATTA nc-transcript-variant
rs1056872 -- 11,666,161(-) TATGG(C/T)GGTGG nc-transcript-variant
rs111679389 -- 11,665,951(+) GTCTT(C/T)TTTGT nc-transcript-variant
rs111726458 -- 11,668,251(+) CTGCA(C/G)TCCAG upstream-variant-2KB
rs112171913 -- 11,665,721(+) CTTTC(-/T)TTTTT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for HNRNPA1P10 Gene

Variant ID Type Subtype PubMed ID
nsv509721 CNV insertion 20534489
nsv525966 CNV gain 19592680
nsv960787 CNV duplication 23825009

Relevant External Links for HNRNPA1P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HNRNPA1P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for HNRNPA1P10 Gene

Disorders for HNRNPA1P10 Gene

Relevant External Links for HNRNPA1P10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HNRNPA1P10

No disorders were found for HNRNPA1P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HNRNPA1P10 Gene

Publications for HNRNPA1P10 Gene

  1. RNA-binding proteins heterogeneous nuclear ribonucleoprotein A1, E1, and K are involved in post-transcriptional control of collagen I and III synthesis. (PMID: 15514164) Thiele B.J. … Regitz-Zagrosek V. (Circ. Res. 2004) 3 64
  2. Construction of a human full-length cDNA bank. (PMID: 7821789) Kato S. … Aoki T. (Gene 1994) 3 64
  3. cDNA cloning of human hnRNP protein A1 reveals the existence of multiple mRNA isoforms. (PMID: 2836799) Buvoli M. … Horandi C. (Nucleic Acids Res. 1988) 3 64

Products for HNRNPA1P10 Gene

Sources for HNRNPA1P10 Gene

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