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HMGN3P1 Gene(Pseudogene)

High Mobility Group Nucleosomal Binding Domain 3 Pseudogene 1

GCID:
GC01P152399
GIFtS:
12
Genes Participants
UDN Logo

Aliases for HMGN3P1 Gene

Aliases for HMGN3P1 Gene

  • High Mobility Group Nucleosomal Binding Domain 3 Pseudogene 1 2 3 5

External Ids for HMGN3P1 Gene

Previous GeneCards Identifiers for HMGN3P1 Gene

  • GC01P152373

Summaries for HMGN3P1 Gene

GeneCards Summary for HMGN3P1 Gene

HMGN3P1 (High Mobility Group Nucleosomal Binding Domain 3 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN3P1 Gene

Genomics for HMGN3P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HMGN3P1 Gene

Enhancers for HMGN3P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G152392 0.9 ENCODE 0.4 -6.4 -6444 0.2 PKNOX1 NFIB INSM2 FEZF1 BMI1 RAD21 SCRT2 ZNF350 FOS KLF7 FLG2 MRPL9 FLG HMGN3P1 GC01P152378
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN3P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN3P1 Gene

Chromosome:
1
Start:
152,399,463 bp from pter
End:
152,403,683 bp from pter
Size:
4,221 bases
Orientation:
Plus strand

Genomic View for HMGN3P1 Gene

Genes around HMGN3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN3P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HMGN3P1 Gene

Proteins for HMGN3P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HMGN3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN3P1 Gene

Domains & Families for HMGN3P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN3P1 Gene

Function for HMGN3P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN3P1 Gene

Localization for HMGN3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN3P1 Gene

Pathways & Interactions for HMGN3P1 Gene

SuperPathways for HMGN3P1 Gene

PathCards logo More details on SuperPathways for HMGN3P1
No Data Available

Interacting Proteins for HMGN3P1 Gene

Gene Ontology (GO) - Biological Process for HMGN3P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN3P1 Gene

Drugs & Compounds for HMGN3P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HMGN3P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HMGN3P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN3P1 Gene

No ASD Table

Relevant External Links for HMGN3P1 Gene

GeneLoc Exon Structure for
HMGN3P1
ECgene alternative splicing isoforms for
HMGN3P1

Expression for HMGN3P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN3P1 Gene

mRNA expression in normal human tissues for HMGN3P1 Gene
mRNA expression by GTEx for HMGN3P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN3P1 Gene:

HMGN3P1
genes like me logo Genes that share expression patterns with HMGN3P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN3P1 Gene

Orthologs for HMGN3P1 Gene

Evolution for HMGN3P1 Gene

ENSEMBL:
Gene Tree for HMGN3P1 (if available)
TreeFam:
Gene Tree for HMGN3P1 (if available)

No data available for Orthologs for HMGN3P1 Gene

Paralogs for HMGN3P1 Gene

No data available for Paralogs for HMGN3P1 Gene

Variants for HMGN3P1 Gene

Relevant External Links for HMGN3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN3P1 Gene

Disorders for HMGN3P1 Gene

No disorders were found for HMGN3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN3P1 Gene

Publications for HMGN3P1 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN3P1 Gene

Sources for HMGN3P1 Gene

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