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Aliases for HMGN2P47 Gene

Aliases for HMGN2P47 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 47 2 3 5

External Ids for HMGN2P47 Gene

Previous GeneCards Identifiers for HMGN2P47 Gene

  • GC15M067296

Summaries for HMGN2P47 Gene

GeneCards Summary for HMGN2P47 Gene

HMGN2P47 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 47) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P47 Gene

Genomics for HMGN2P47 Gene

Regulatory Elements for HMGN2P47 Gene

Enhancers for HMGN2P47 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G067002 0.7 dbSUPER 0.7 -2.9 -2889 2.2 PKNOX1 FOXA2 MTA2 EP300 ADNP IKZF1 ZNF169 CEBPA ZNF24 MAFK LOC102723493 IQCH HMGN2P47 SMAD3
GH15G067023 1.6 Ensembl ENCODE dbSUPER 0.3 -24.2 -24188 3.9 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 ZNF2 ZBTB7B YY1 FOS SKOR1 IQCH AAGAB SMAD3 HMGN2P47
GH15G067013 1.2 Ensembl ENCODE dbSUPER 0.4 -12.9 -12915 1.8 JUN ZMYM3 RBBP5 ZBTB40 ZNF664 GATA3 GATA2 FOS ZBTB8A FOXA1 AAGAB IQCH HMGN2P47 SMAD3
GH15G067010 1.2 Ensembl ENCODE dbSUPER 0.4 -10.2 -10152 0.9 HDAC1 CTCF ZNF654 PKNOX1 GFI1B NFYC MAX REST RAD21 PBX2 IQCH AAGAB HMGN2P47 SMAD3
GH15G067029 1.5 Ensembl ENCODE dbSUPER 0.3 -29.2 -29238 1.6 PKNOX1 FOXA2 ARID4B GLI4 ZNF48 ETS1 TCF12 KLF7 PAF1 SP5 AAGAB IQCH SMAD3 HMGN2P47
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P47 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P47 Gene

Chromosome:
15
Start:
67,000,814 bp from pter
End:
67,001,085 bp from pter
Size:
272 bases
Orientation:
Minus strand

Genomic View for HMGN2P47 Gene

Genes around HMGN2P47 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P47 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P47 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P47 Gene

Proteins for HMGN2P47 Gene

Post-translational modifications for HMGN2P47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P47 Gene

Domains & Families for HMGN2P47 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P47 Gene

Function for HMGN2P47 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P47 Gene

Localization for HMGN2P47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P47 Gene

Pathways & Interactions for HMGN2P47 Gene

SuperPathways for HMGN2P47 Gene

No Data Available

Interacting Proteins for HMGN2P47 Gene

Gene Ontology (GO) - Biological Process for HMGN2P47 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P47 Gene

Transcripts for HMGN2P47 Gene

mRNA/cDNA for HMGN2P47 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P47 Gene

No ASD Table

Relevant External Links for HMGN2P47 Gene

GeneLoc Exon Structure for
HMGN2P47
ECgene alternative splicing isoforms for
HMGN2P47

Expression for HMGN2P47 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P47 Gene

mRNA differential expression in normal tissues according to GTEx for HMGN2P47 Gene

This gene is overexpressed in Liver (x25.2), Kidney - Cortex (x9.4), and Pancreas (x8.2).

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P47 Gene:

HMGN2P47
genes like me logo Genes that share expression patterns with HMGN2P47: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P47 Gene

Orthologs for HMGN2P47 Gene

Evolution for HMGN2P47 Gene

ENSEMBL:
Gene Tree for HMGN2P47 (if available)
TreeFam:
Gene Tree for HMGN2P47 (if available)

No data available for Orthologs for HMGN2P47 Gene

Paralogs for HMGN2P47 Gene

No data available for Paralogs for HMGN2P47 Gene

Variants for HMGN2P47 Gene

Relevant External Links for HMGN2P47 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P47

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P47 Gene

Disorders for HMGN2P47 Gene

No disorders were found for HMGN2P47 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P47 Gene

Publications for HMGN2P47 Gene

No publications were found for HMGN2P47 Gene.

Products for HMGN2P47 Gene

Sources for HMGN2P47 Gene

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