Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGN2P34 Gene

Subcategory (RNA class) for HMGN2P34 Gene

lncRNA

Aliases for HMGN2P34 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 34 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 34 2

External Ids for HMGN2P34 Gene

ORGUL Members for HMGN2P34 Gene

Previous GeneCards Identifiers for HMGN2P34 Gene

  • GC00U931617
  • GC10M074398

Summaries for HMGN2P34 Gene

GeneCards Summary for HMGN2P34 Gene

HMGN2P34 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 34) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HMGN2P34 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P34 Gene

Genomics for HMGN2P34 Gene

Regulatory Elements for HMGN2P34 Gene

Enhancers for HMGN2P34 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H072326 2.1 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +304.5 304518 11 HDGF FOXA2 PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B DNAJB12 ENSG00000227540 HMGN2P34 CDH23-AS1 DNAJC9 ECD ENSG00000272599 DDIT4 PSAP P4HA1
GH10H073584 1.6 Ensembl ENCODE dbSUPER 14.6 -949.6 -949576 2 PKNOX1 FOXA2 ARID4B FEZF1 DMAP1 ZNF2 YY1 ZNF766 CBX5 FOS ENSG00000272140 AGAP5 GLUD1P3 SEC24C NUDT13 DUSP8P5 ZSWIM8 BMS1P4 ZSWIM8-AS1 ENSG00000242288
GH10H072270 1.5 ENCODE dbSUPER 14.6 +362.0 361999 8 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A PPARGC1A ECD DNAJB12 ENSG00000227540 FAM149B1 RPL17P50 DNAJC9 ENSG00000272630 ASCC1 HMGN2P34 CDH23-AS1
GH10H072352 1.4 ENCODE dbSUPER 14.6 +282.5 282526 2 FEZF1 DMAP1 YY1 ZNF143 ZNF548 SP3 ZC3H11A MEF2D SSRP1 ZNF610 DNAJB12 ECD EIF4A2P2 ENSG00000227540 HMGN2P34 CDH23-AS1 ENSG00000272599 CHST3 ANAPC16 RPL17P50
GH10H072227 1.2 ENCODE dbSUPER 14.6 +408.3 408284 1 PKNOX1 ARNT FEZF1 ZNF2 KLF7 TSHZ1 ZNF488 ZNF623 ZNF518A ZNF610 HMGN2P34 CDH23-AS1 ENSG00000200294 DNAJB12 ASCC1 FAM149B1 ENSG00000272630 ENSG00000200170 GC10M072248
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P34 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P34 Gene

Chromosome:
10
Start:
72,636,497 bp from pter
End:
72,636,765 bp from pter
Size:
269 bases
Orientation:
Minus strand

Genomic View for HMGN2P34 Gene

Genes around HMGN2P34 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P34 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P34 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P34 Gene

Proteins for HMGN2P34 Gene

Post-translational modifications for HMGN2P34 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P34 Gene

Domains & Families for HMGN2P34 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P34 Gene

Function for HMGN2P34 Gene

Phenotypes From GWAS Catalog for HMGN2P34 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN2P34
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P34 Gene

Localization for HMGN2P34 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P34 Gene

Pathways & Interactions for HMGN2P34 Gene

SuperPathways for HMGN2P34 Gene

No Data Available

Interacting Proteins for HMGN2P34 Gene

Gene Ontology (GO) - Biological Process for HMGN2P34 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P34 Gene

Drugs & Compounds for HMGN2P34 Gene

No Compound Related Data Available

Transcripts for HMGN2P34 Gene

mRNA/cDNA for HMGN2P34 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN2P34
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P34 Gene

No ASD Table

Relevant External Links for HMGN2P34 Gene

GeneLoc Exon Structure for
HMGN2P34
ECgene alternative splicing isoforms for
HMGN2P34

Expression for HMGN2P34 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P34 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P34 Gene:

HMGN2P34
genes like me logo Genes that share expression patterns with HMGN2P34: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P34 Gene

Orthologs for HMGN2P34 Gene

Evolution for HMGN2P34 Gene

ENSEMBL:
Gene Tree for HMGN2P34 (if available)
TreeFam:
Gene Tree for HMGN2P34 (if available)

No data available for Orthologs for HMGN2P34 Gene

Paralogs for HMGN2P34 Gene

No data available for Paralogs for HMGN2P34 Gene

Variants for HMGN2P34 Gene

Relevant External Links for HMGN2P34 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P34

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P34 Gene

Disorders for HMGN2P34 Gene

No disorders were found for HMGN2P34 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P34 Gene

Publications for HMGN2P34 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60

Products for HMGN2P34 Gene

Sources for HMGN2P34 Gene

Content
Loading form....