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HMGN2P32 Gene(Pseudogene)

High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 32

GCID:
GC09M107458
GIFtS:
14
Genes Participants
UDN Logo

Aliases for HMGN2P32 Gene

Subcategory (RNA class) for HMGN2P32 Gene

lncRNA

Aliases for HMGN2P32 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 32 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 32 2

External Ids for HMGN2P32 Gene

ORGUL Members for HMGN2P32 Gene

Previous GeneCards Identifiers for HMGN2P32 Gene

  • GC00U931332
  • GC09M110221

Summaries for HMGN2P32 Gene

GeneCards Summary for HMGN2P32 Gene

HMGN2P32 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 32) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P32 Gene

Genomics for HMGN2P32 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HMGN2P32 Gene

Enhancers for HMGN2P32 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G107465 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.6 -7595 1.4 CTCF SUZ12 SIN3A RBBP5 RAD21 HDAC2 POLR2A SMC3 EZH2 KLF4 LINC01509 HMGN2P32
GH09G107424 1.3 FANTOM5 Ensembl ENCODE 0.3 +32.9 32925 1.2 CTCF TEAD4 MAX RBBP5 ZNF48 RAD21 ZNF7 SMC3 ZNF143 CREM HMGN2P32 RAD23B
GH09G107422 1.1 Ensembl ENCODE 0.3 +35.9 35906 0.4 GTF2F1 CTCF USF1 NFIB MAX ZNF48 RAD21 RFX5 GATA3 ZNF143 HMGN2P32 RAD23B
GH09G107437 0.8 ENCODE 0.4 +19.6 19623 2.0 NFIB JUN TEAD4 FEZF1 RBBP5 FOSL1 GTF3C2 GATA3 POLR2A FOS KLF4 HMGN2P32 RAD23B
GH09G107460 0.4 ENCODE 0.7 -2.0 -1989 0.2 REST HMGN2P32 LINC01509
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P32 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P32 Gene

Chromosome:
9
Start:
107,458,038 bp from pter
End:
107,458,306 bp from pter
Size:
269 bases
Orientation:
Minus strand

Genomic View for HMGN2P32 Gene

Genes around HMGN2P32 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P32 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P32 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HMGN2P32 Gene

Proteins for HMGN2P32 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HMGN2P32 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P32 Gene

Domains & Families for HMGN2P32 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P32 Gene

Function for HMGN2P32 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P32 Gene

Localization for HMGN2P32 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P32 Gene

Pathways & Interactions for HMGN2P32 Gene

SuperPathways for HMGN2P32 Gene

PathCards logo More details on SuperPathways for HMGN2P32
No Data Available

Interacting Proteins for HMGN2P32 Gene

Gene Ontology (GO) - Biological Process for HMGN2P32 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P32 Gene

Drugs & Compounds for HMGN2P32 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HMGN2P32 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HMGN2P32 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P32 Gene

No ASD Table

Relevant External Links for HMGN2P32 Gene

GeneLoc Exon Structure for
HMGN2P32
ECgene alternative splicing isoforms for
HMGN2P32

Expression for HMGN2P32 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P32 Gene

mRNA expression in normal human tissues for HMGN2P32 Gene
mRNA expression by GTEx for HMGN2P32 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P32 Gene:

HMGN2P32
genes like me logo Genes that share expression patterns with HMGN2P32: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P32 Gene

Orthologs for HMGN2P32 Gene

Evolution for HMGN2P32 Gene

ENSEMBL:
Gene Tree for HMGN2P32 (if available)
TreeFam:
Gene Tree for HMGN2P32 (if available)

No data available for Orthologs for HMGN2P32 Gene

Paralogs for HMGN2P32 Gene

No data available for Paralogs for HMGN2P32 Gene

Variants for HMGN2P32 Gene

Relevant External Links for HMGN2P32 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P32

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P32 Gene

Disorders for HMGN2P32 Gene

No disorders were found for HMGN2P32 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P32 Gene

Publications for HMGN2P32 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN2P32 Gene

Sources for HMGN2P32 Gene

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