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Aliases for HMGN2P3 Gene

Aliases for HMGN2P3 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 3 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2-Like 3 2 3
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 3 2
  • HMGN2L3 3

External Ids for HMGN2P3 Gene

Previous HGNC Symbols for HMGN2P3 Gene

  • HMGN2L3

Summaries for HMGN2P3 Gene

GeneCards Summary for HMGN2P3 Gene

HMGN2P3 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 3) is a Pseudogene.

Additional gene information for HMGN2P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P3 Gene

Genomics for HMGN2P3 Gene

Regulatory Elements for HMGN2P3 Gene

Enhancers for HMGN2P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H025256 1.2 ENCODE 55.1 +775.1 775069 2 MLX ZFP64 FEZF1 DMAP1 ZNF416 ZNF143 ZNF548 SP3 NFYC MEF2D RBBP6 LOC554206 HMGN2P3 SCML2P2 ENSG00000261669 ARHGAP17 ZKSCAN2 ENSG00000263326 LCMT1-AS2 LOC100421173
GH16H025047 2 FANTOM5 Ensembl ENCODE dbSUPER 29.1 +982.6 982614 5 HDGF PKNOX1 ARNT ZFP64 SIN3A FEZF1 ZNF2 ZNF143 ZNF207 FOS RBBP6 HMGN2P3 ENSG00000263326 ENSG00000261669 SCML2P2 LOC554206 ARHGAP17 ZKSCAN2 LOC100421173 LCMT1-AS2
GH16H025055 1.4 Ensembl ENCODE dbSUPER 9.7 +977.2 977230 0 HDGF RB1 ARNT ARID4B ZNF2 RAD21 CHAMP1 GTF3C2 ZNF143 RCOR1 ARHGAP17 RBBP6 LCMT1 LCMT1-AS2 HMGN2P3 LINC02175 LOC554206
GH16H025108 1.4 FANTOM5 ENCODE 9.7 +922.1 922101 3 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS SP3 CEBPZ RBBP6 ARHGAP17 LINC02191 LINC2194 LOC100420641 LCMT1-AS2 HMGN2P3 LCMT1 LOC100421173 SLC5A11
GH16H025106 1.1 ENCODE 10.4 +925.7 925737 2 HDGF FOXA2 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ZNF143 ARHGAP17 RBBP6 HMGN2P3 LCMT1 LCMT1-AS1 LOC100421173 GC16M025105
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P3 Gene

Chromosome:
16
Start:
26,031,717 bp from pter
End:
26,032,931 bp from pter
Size:
1,215 bases
Orientation:
Minus strand

Genomic View for HMGN2P3 Gene

Genes around HMGN2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P3 Gene

Proteins for HMGN2P3 Gene

Post-translational modifications for HMGN2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P3 Gene

Domains & Families for HMGN2P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P3 Gene

Function for HMGN2P3 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN2P3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P3 Gene

Localization for HMGN2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P3 Gene

Pathways & Interactions for HMGN2P3 Gene

SuperPathways for HMGN2P3 Gene

No Data Available

Interacting Proteins for HMGN2P3 Gene

Gene Ontology (GO) - Biological Process for HMGN2P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P3 Gene

Drugs & Compounds for HMGN2P3 Gene

No Compound Related Data Available

Transcripts for HMGN2P3 Gene

mRNA/cDNA for HMGN2P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN2P3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P3 Gene

No ASD Table

Relevant External Links for HMGN2P3 Gene

GeneLoc Exon Structure for
HMGN2P3
ECgene alternative splicing isoforms for
HMGN2P3

Expression for HMGN2P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P3 Gene:

HMGN2P3
genes like me logo Genes that share expression patterns with HMGN2P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P3 Gene

Orthologs for HMGN2P3 Gene

Evolution for HMGN2P3 Gene

ENSEMBL:
Gene Tree for HMGN2P3 (if available)
TreeFam:
Gene Tree for HMGN2P3 (if available)

No data available for Orthologs for HMGN2P3 Gene

Paralogs for HMGN2P3 Gene

No data available for Paralogs for HMGN2P3 Gene

Variants for HMGN2P3 Gene

Relevant External Links for HMGN2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P3 Gene

Disorders for HMGN2P3 Gene

No disorders were found for HMGN2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P3 Gene

Publications for HMGN2P3 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60
  2. Multiple isoforms of heparan sulfate D-glucosaminyl 3-O-sulfotransferase. Isolation, characterization, and expression of human cdnas and identification of distinct genomic loci. (PMID: 9988767) Shworak NW … Rosenberg RD (The Journal of biological chemistry 1999) 3 60
  3. Mapping and characterization of the eukaryotic early pregnancy factor/chaperonin 10 gene family. (PMID: 10763410) Summers KM … Cavanagh AC (Somatic cell and molecular genetics 1998) 3 60

Products for HMGN2P3 Gene

Sources for HMGN2P3 Gene

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