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Aliases for HMGN2P3 Gene

Aliases for HMGN2P3 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 3 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2-Like 3 2 3
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 3 2
  • HMGN2L3 3

External Ids for HMGN2P3 Gene

Previous HGNC Symbols for HMGN2P3 Gene

  • HMGN2L3

Summaries for HMGN2P3 Gene

GeneCards Summary for HMGN2P3 Gene

HMGN2P3 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P3 Gene

Genomics for HMGN2P3 Gene

Regulatory Elements for HMGN2P3 Gene

Enhancers for HMGN2P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F025256 1.1 ENCODE 15.2 +775.1 775069 2.8 CREB3L1 MLX ZFP64 FEZF1 DMAP1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 ENSG00000261669 LOC554206 ZKSCAN2 LOC105371146 LOC100420641 LOC105371143 HMGN2P3 LCMT1 SCML2P2 ENSG00000263326
GH16F025225 1.2 Ensembl ENCODE 11.2 +807.4 807440 0.6 HDGF ELF3 CTCF ZNF792 TEAD4 ZNF384 RAD21 TEAD3 SLC30A9 GATAD1 HMGN2P3 ZKSCAN2 AQP8 PIR35238
GH16F025037 1 FANTOM5 ENCODE 11.2 +994.7 994695 2.1 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF143 FOS LOC105371146 LOC105371143 LOC105371142 LOC100420641 HMGN2P3 SCML2P2 LOC554206 LOC283887
GH16F025108 0.9 FANTOM5 ENCODE 9.7 +922.1 922101 3.7 PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS LOC105371146 LOC105371143 LOC100420641 LOC105371142 LCMT1-AS2 HMGN2P3 LCMT1 LOC100421173 SLC5A11 GC16M025105
GH16F025055 0.7 Ensembl ENCODE 9.7 +977.1 977131 0.8 HDGF ATF1 PKNOX1 ARNT ARID4B SIN3A ZNF2 ZNF48 YY1 GTF3C2 LCMT1 ARHGAP17 LCMT1-AS2 HMGN2P3 LOC283887 LOC554206
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGN2P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P3 Gene

Chromosome:
16
Start:
26,031,717 bp from pter
End:
26,032,931 bp from pter
Size:
1,215 bases
Orientation:
Minus strand

Genomic View for HMGN2P3 Gene

Genes around HMGN2P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P3 Gene

Proteins for HMGN2P3 Gene

Post-translational modifications for HMGN2P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P3 Gene

Domains & Families for HMGN2P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P3 Gene

Function for HMGN2P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P3 Gene

Localization for HMGN2P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P3 Gene

Pathways & Interactions for HMGN2P3 Gene

SuperPathways for HMGN2P3 Gene

No Data Available

Interacting Proteins for HMGN2P3 Gene

Gene Ontology (GO) - Biological Process for HMGN2P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P3 Gene

Transcripts for HMGN2P3 Gene

mRNA/cDNA for HMGN2P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P3 Gene

No ASD Table

Relevant External Links for HMGN2P3 Gene

GeneLoc Exon Structure for
HMGN2P3
ECgene alternative splicing isoforms for
HMGN2P3

Expression for HMGN2P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGN2P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P3 Gene:

HMGN2P3
genes like me logo Genes that share expression patterns with HMGN2P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN2P3 Gene

Orthologs for HMGN2P3 Gene

Evolution for HMGN2P3 Gene

ENSEMBL:
Gene Tree for HMGN2P3 (if available)
TreeFam:
Gene Tree for HMGN2P3 (if available)

No data available for Orthologs for HMGN2P3 Gene

Paralogs for HMGN2P3 Gene

No data available for Paralogs for HMGN2P3 Gene

Variants for HMGN2P3 Gene

Relevant External Links for HMGN2P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P3 Gene

Disorders for HMGN2P3 Gene

No disorders were found for HMGN2P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P3 Gene

Publications for HMGN2P3 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. Multiple isoforms of heparan sulfate D-glucosaminyl 3-O- sulfotransferase. Isolation, characterization, and expression of human cDNAs and identification of distinct genomic loci. (PMID: 9988767) Shworak N.W. … Rosenberg R.D. (J. Biol. Chem. 1999) 3 64
  3. Mapping and characterization of the eukaryotic early pregnancy factor/chaperonin 10 gene family. (PMID: 10763410) Summers K.M. … Cavanagh A.C. (Somat. Cell Mol. Genet. 1998) 3 64

Products for HMGN2P3 Gene

Sources for HMGN2P3 Gene

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