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Aliases for HMGN2P20 Gene

Aliases for HMGN2P20 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 20 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 20 2

External Ids for HMGN2P20 Gene

Previous GeneCards Identifiers for HMGN2P20 Gene

  • GC00U931599
  • GC02P024556

Summaries for HMGN2P20 Gene

GeneCards Summary for HMGN2P20 Gene

HMGN2P20 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P20 Gene

Genomics for HMGN2P20 Gene

Regulatory Elements for HMGN2P20 Gene

Enhancers for HMGN2P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F024332 1.1 Ensembl ENCODE 0.8 +3.5 3494 2.0 PKNOX1 ZNF146 TAL1 MLLT1 WT1 YY1 ITSN2 TP53I3 FAM228A HMGN2P20 RPL36AP13
GH02F024327 1.1 Ensembl ENCODE 0.8 -0.4 -353 4.7 HDGF PKNOX1 CBX3 MTA2 JUNB TBX21 ZNF316 CBX5 PBX2 EED ITSN2 ENSG00000251805 FAM228A HMGN2P20 GC02M024302 PIR31330
GH02F024315 0.7 ENCODE 0.4 -14.6 -14627 1.0 PKNOX1 MTA2 HLF JUNB BMI1 TBX21 EP300 RAD51 CBX5 ZNF585B ITSN2 ENSG00000251805 ENSG00000242628 DNAJC27 HMGN2P20 GC02M024302 PIR31330
GH02F024303 1 Ensembl ENCODE 0.3 -25.8 -25787 1.8 HLF BHLHE40 CEBPB RAD21 NR2F2 RARA YY1 ATF3 PBX2 CEBPA FAM228A ENSG00000251805 ITSN2 ENSG00000242628 GC02M024302 PIR31330 HMGN2P20
GH02F024314 0.9 Ensembl 0.3 -16.2 -16207 0.2 MTA2 CBX5 GLIS1 IKZF1 JUNB EBF1 ITSN2 ENSG00000242628 GC02M024302 PIR31330 HMGN2P20
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGN2P20 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P20 Gene

Chromosome:
2
Start:
24,330,307 bp from pter
End:
24,332,356 bp from pter
Size:
2,050 bases
Orientation:
Plus strand

Genomic View for HMGN2P20 Gene

Genes around HMGN2P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P20 Gene

Proteins for HMGN2P20 Gene

Post-translational modifications for HMGN2P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P20 Gene

Domains & Families for HMGN2P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P20 Gene

Function for HMGN2P20 Gene

Phenotypes for HMGN2P20 Gene

GenomeRNAi human phenotypes for HMGN2P20:
genes like me logo Genes that share phenotypes with HMGN2P20: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P20 Gene

Localization for HMGN2P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P20 Gene

Pathways & Interactions for HMGN2P20 Gene

SuperPathways for HMGN2P20 Gene

No Data Available

Interacting Proteins for HMGN2P20 Gene

Gene Ontology (GO) - Biological Process for HMGN2P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P20 Gene

Transcripts for HMGN2P20 Gene

mRNA/cDNA for HMGN2P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P20 Gene

No ASD Table

Relevant External Links for HMGN2P20 Gene

GeneLoc Exon Structure for
HMGN2P20
ECgene alternative splicing isoforms for
HMGN2P20

Expression for HMGN2P20 Gene

mRNA expression in normal human tissues for HMGN2P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P20 Gene:

HMGN2P20
genes like me logo Genes that share expression patterns with HMGN2P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN2P20 Gene

Orthologs for HMGN2P20 Gene

Evolution for HMGN2P20 Gene

ENSEMBL:
Gene Tree for HMGN2P20 (if available)
TreeFam:
Gene Tree for HMGN2P20 (if available)

No data available for Orthologs for HMGN2P20 Gene

Paralogs for HMGN2P20 Gene

No data available for Paralogs for HMGN2P20 Gene

Variants for HMGN2P20 Gene

Relevant External Links for HMGN2P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P20 Gene

Disorders for HMGN2P20 Gene

No disorders were found for HMGN2P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P20 Gene

Publications for HMGN2P20 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN2P20 Gene

Sources for HMGN2P20 Gene

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