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Aliases for HMGN2P19 Gene

Subcategory (RNA class) for HMGN2P19 Gene

lncRNA

Aliases for HMGN2P19 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 19 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 19 2

External Ids for HMGN2P19 Gene

ORGUL Members for HMGN2P19 Gene

Previous GeneCards Identifiers for HMGN2P19 Gene

  • GC00U931256
  • GC01P229707

Summaries for HMGN2P19 Gene

GeneCards Summary for HMGN2P19 Gene

HMGN2P19 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 19) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HMGN2P19 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P19 Gene

Genomics for HMGN2P19 Gene

GeneHancer (GH) Regulatory Elements for HMGN2P19 Gene

Promoters and enhancers for HMGN2P19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I229507 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 57.8 -62.0 -62046 2.8 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B LOC101927478 NUP133 HMGN2P19 GC01M229537 RNU4-21P
GH01I229556 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 35.5 -12.1 -12072 3 HDGF PKNOX1 ARNT ARID4B SIN3A ZNF2 YY1 POLR2B CBX5 ZNF213 ABCB10 HMGN2P19 NUP133 TAF5L RNA5SP78
GH01I228781 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 32.3 -787.5 -787469 3.7 FEZF1 ZNF2 ZNF213 ZNF302 ZNF416 FOS KLF13 REST KAT8 MIER3 NUP133 CICP26 C1orf35 ENSG00000269890 HMGN2P19 ABCB10 HIST3H3 TAF5L URB2 LOC105373159
GH01I229219 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 29.8 -348.6 -348586 4.5 CLOCK YBX1 FEZF1 DMAP1 YY1 ZNF213 ZNF416 ZNF548 SP3 ZNF610 NUP133 ENSG00000269890 URB2 HMGN2P19 LOC105373159 LOC105373158 ENSG00000226920 HIST3H3 TAF5L ABCB10
GH01I229228 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 21.2 -339.8 -339805 3.8 PKNOX1 FOXA2 SIN3A FEZF1 ZNF2 YY1 ZNF213 FOS SP3 JUNB NUP133 ENSG00000269890 HMGN2P19 HIST3H3 LOC105373158 ABCB10 URB2 ENSG00000226920 DUSP5P1 CCSAP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN2P19 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN2P19 Gene

Genomic Locations for HMGN2P19 Gene
chr1:229,570,532-229,570,796
(GRCh38/hg38)
Size:
265 bases
Orientation:
Plus strand
chr1:229,706,279-229,706,543
(GRCh37/hg19)

Genomic View for HMGN2P19 Gene

Genes around HMGN2P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P19 Gene

Proteins for HMGN2P19 Gene

Post-translational modifications for HMGN2P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P19 Gene

Domains & Families for HMGN2P19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P19 Gene

Function for HMGN2P19 Gene

Phenotypes From GWAS Catalog for HMGN2P19 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P19 Gene

Localization for HMGN2P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P19 Gene

Pathways & Interactions for HMGN2P19 Gene

SuperPathways for HMGN2P19 Gene

No Data Available

Interacting Proteins for HMGN2P19 Gene

Gene Ontology (GO) - Biological Process for HMGN2P19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P19 Gene

Drugs & Compounds for HMGN2P19 Gene

No Compound Related Data Available

Transcripts for HMGN2P19 Gene

mRNA/cDNA for HMGN2P19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P19 Gene

No ASD Table

Relevant External Links for HMGN2P19 Gene

GeneLoc Exon Structure for
HMGN2P19
ECgene alternative splicing isoforms for
HMGN2P19

Expression for HMGN2P19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P19 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P19 Gene:

HMGN2P19
genes like me logo Genes that share expression patterns with HMGN2P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P19 Gene

Orthologs for HMGN2P19 Gene

Evolution for HMGN2P19 Gene

ENSEMBL:
Gene Tree for HMGN2P19 (if available)
TreeFam:
Gene Tree for HMGN2P19 (if available)

No data available for Orthologs for HMGN2P19 Gene

Paralogs for HMGN2P19 Gene

No data available for Paralogs for HMGN2P19 Gene

Variants for HMGN2P19 Gene

Additional Variant Information for HMGN2P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P19 Gene

Disorders for HMGN2P19 Gene

No disorders were found for HMGN2P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P19 Gene

Publications for HMGN2P19 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGN2P19 Gene

Sources for HMGN2P19 Gene

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