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Aliases for HMGN2P19 Gene

Subcategory (RNA class) for HMGN2P19 Gene

lncRNA

Aliases for HMGN2P19 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 19 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 19 2

External Ids for HMGN2P19 Gene

ORGUL Members for HMGN2P19 Gene

Previous GeneCards Identifiers for HMGN2P19 Gene

  • GC00U931256
  • GC01P229707

Summaries for HMGN2P19 Gene

GeneCards Summary for HMGN2P19 Gene

HMGN2P19 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 19) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P19 Gene

Genomics for HMGN2P19 Gene

Regulatory Elements for HMGN2P19 Gene

Enhancers for HMGN2P19 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F229556 1.5 FANTOM5 ENCODE 43.9 -12.1 -12072 3.0 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A ZNF2 YY1 CBX5 ZNF143 HMGN2P19 URB2 ABCB10 NUP133 TAF5L RNA5SP78
GH01F229507 1.2 ENCODE 48.8 -62.0 -62047 2.8 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 HMGN2P19 NUP133 LOC101927478 RNU4-21P GC01M229537
GH01F228646 1.6 FANTOM5 ENCODE 30.3 -922.5 -922495 2.8 ARID4B SIN3A YBX1 FEZF1 DMAP1 ZNF2 ZNF302 ZNF416 ZNF207 FOS CICP26 NUP133 ENSG00000269890 C1orf35 HMGN2P19 HIST3H3 PRSS38 TAF5L ABCB10 LOC100421842
GH01F229578 1.1 Ensembl ENCODE 37.6 +8.7 8669 1.2 BMI1 FEZF1 RAD21 ZNF143 ZNF263 ZNF680 YY2 REST TSHZ1 ZNF843 HMGN2P19 GC01M229599
GH01F229478 1 Ensembl ENCODE 33.8 -90.5 -90463 3.0 HDGF PKNOX1 MTA2 NR2F1 JUNB EBF1 MNT TBX21 POLR2A PBX2 HMGN2P19 TMEM78 ENSG00000177788 ENSG00000240524 RAB4A ACTA1 RNU4-21P ABCB10 RNU6-180P CCSAP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P19 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P19 Gene

Chromosome:
1
Start:
229,570,532 bp from pter
End:
229,570,796 bp from pter
Size:
265 bases
Orientation:
Plus strand

Genomic View for HMGN2P19 Gene

Genes around HMGN2P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P19 Gene

Proteins for HMGN2P19 Gene

Post-translational modifications for HMGN2P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P19 Gene

Domains & Families for HMGN2P19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P19 Gene

Function for HMGN2P19 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P19 Gene

Localization for HMGN2P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P19 Gene

Pathways & Interactions for HMGN2P19 Gene

SuperPathways for HMGN2P19 Gene

No Data Available

Interacting Proteins for HMGN2P19 Gene

Gene Ontology (GO) - Biological Process for HMGN2P19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P19 Gene

Transcripts for HMGN2P19 Gene

mRNA/cDNA for HMGN2P19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P19 Gene

No ASD Table

Relevant External Links for HMGN2P19 Gene

GeneLoc Exon Structure for
HMGN2P19
ECgene alternative splicing isoforms for
HMGN2P19

Expression for HMGN2P19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGN2P19 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P19 Gene:

HMGN2P19
genes like me logo Genes that share expression patterns with HMGN2P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN2P19 Gene

Orthologs for HMGN2P19 Gene

Evolution for HMGN2P19 Gene

ENSEMBL:
Gene Tree for HMGN2P19 (if available)
TreeFam:
Gene Tree for HMGN2P19 (if available)

No data available for Orthologs for HMGN2P19 Gene

Paralogs for HMGN2P19 Gene

No data available for Paralogs for HMGN2P19 Gene

Variants for HMGN2P19 Gene

Relevant External Links for HMGN2P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P19 Gene

Disorders for HMGN2P19 Gene

No disorders were found for HMGN2P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P19 Gene

Publications for HMGN2P19 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN2P19 Gene

Sources for HMGN2P19 Gene

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