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Aliases for HMGN2P17 Gene

Subcategory (RNA class) for HMGN2P17 Gene

lncRNA

Aliases for HMGN2P17 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 17 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 17 2

External Ids for HMGN2P17 Gene

ORGUL Members for HMGN2P17 Gene

Summaries for HMGN2P17 Gene

GeneCards Summary for HMGN2P17 Gene

HMGN2P17 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 17) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HMGN2P17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P17 Gene

Genomics for HMGN2P17 Gene

Regulatory Elements for HMGN2P17 Gene

Enhancers for HMGN2P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H008889 1.3 Ensembl ENCODE dbSUPER 0.7 -3.3 -3294 2 TBP FOXA2 CEBPG RAD21 TEAD3 GATA3 POLR2A RCOR1 STAT1 RFX1 ENO1 LOC102724552 HMGN2P17 GC01P008884
GH01H008902 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.2 10215 2 HDAC1 ELF3 HDGF NFIB SIN3A RAD21 RFX5 EGR1 RCOR1 FOS GPR157 ENSG00000221083 ENO1 ENSG00000232208 HMGN2P17
GH01H008899 1.4 Ensembl ENCODE dbSUPER 0.4 +6.5 6487 1 HDAC1 TBP NFRKB DNMT3B RARA POLR3A EGR1 FOS ATF7 SP5 GPR157 ENSG00000221083 LOC102724552 ENSG00000232208 HMGN2P17
GH01H008905 1 Ensembl ENCODE dbSUPER 0.4 +12.4 12440 0 ZNF121 KLF1 USF2 ZBTB33 GPR157 ENSG00000221083 ENSG00000232208 HMGN2P17
GH01H008891 0.5 dbSUPER 0.7 -1.5 -1478 1 CEBPA PRDM4 ZNF592 LOC102724552 ENO1 HMGN2P17 GC01P008884
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P17 Gene

Chromosome:
1
Start:
8,893,409 bp from pter
End:
8,894,603 bp from pter
Size:
1,195 bases
Orientation:
Plus strand

Genomic View for HMGN2P17 Gene

Genes around HMGN2P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P17 Gene

Proteins for HMGN2P17 Gene

Post-translational modifications for HMGN2P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P17 Gene

Domains & Families for HMGN2P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P17 Gene

Function for HMGN2P17 Gene

Phenotypes From GWAS Catalog for HMGN2P17 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN2P17
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P17 Gene

Localization for HMGN2P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN2P17 Gene

Pathways & Interactions for HMGN2P17 Gene

SuperPathways for HMGN2P17 Gene

No Data Available

Interacting Proteins for HMGN2P17 Gene

Gene Ontology (GO) - Biological Process for HMGN2P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P17 Gene

Drugs & Compounds for HMGN2P17 Gene

No Compound Related Data Available

Transcripts for HMGN2P17 Gene

mRNA/cDNA for HMGN2P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN2P17
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P17 Gene

No ASD Table

Relevant External Links for HMGN2P17 Gene

GeneLoc Exon Structure for
HMGN2P17
ECgene alternative splicing isoforms for
HMGN2P17

Expression for HMGN2P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P17 Gene:

HMGN2P17
genes like me logo Genes that share expression patterns with HMGN2P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P17 Gene

Orthologs for HMGN2P17 Gene

Evolution for HMGN2P17 Gene

ENSEMBL:
Gene Tree for HMGN2P17 (if available)
TreeFam:
Gene Tree for HMGN2P17 (if available)

No data available for Orthologs for HMGN2P17 Gene

Paralogs for HMGN2P17 Gene

No data available for Paralogs for HMGN2P17 Gene

Variants for HMGN2P17 Gene

Relevant External Links for HMGN2P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P17 Gene

Disorders for HMGN2P17 Gene

No disorders were found for HMGN2P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P17 Gene

Publications for HMGN2P17 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60

Products for HMGN2P17 Gene

Sources for HMGN2P17 Gene

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