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Aliases for HMGN2P15 Gene

Aliases for HMGN2P15 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 15 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 15 2

External Ids for HMGN2P15 Gene

Previous GeneCards Identifiers for HMGN2P15 Gene

  • GC17M040907

Summaries for HMGN2P15 Gene

GeneCards Summary for HMGN2P15 Gene

HMGN2P15 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 15) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P15 Gene

Genomics for HMGN2P15 Gene

Regulatory Elements for HMGN2P15 Gene

Enhancers for HMGN2P15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F042997 1.5 Ensembl ENCODE 21.4 -246.0 -246043 5.2 CREB3L1 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC DHX8 NBR2 ENSG00000267758 LINC00910 HMGN1P29 HMGN2P15 NAGLU ENSG00000267604 RPL27 FAM134C
GH17F042772 1.2 ENCODE 26.2 -20.5 -20509 4.0 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 HMGN2P15 LINC00910 AOC4P CNTNAP1 MEOX1 DHX8 HMGN1P29 RAMP2-AS1 NAGLU CCR10
GH17F042673 1.2 ENCODE 21.1 +75.2 75209 11.4 MLX CREB3L1 ZFP64 YBX1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 CNTNAP1 DHX8 HMGN2P15 MLX TUBG2 ENSG00000267002 MEOX1 ENSG00000267340 RPL27 KAT2A
GH17F043168 1.4 FANTOM5 ENCODE 13.4 -417.2 -417161 5.0 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 NBR2 TMEM106A RAMP2-AS1 HMGN2P15 NAGLU NBR1 RPL27 AOC3 RAMP2 AOC4P
GH17F042128 1.4 Ensembl ENCODE 13.3 +620.9 620920 8.4 HDGF PKNOX1 ARNT MLX CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 DHX58 HSPB9 RAMP2-AS1 HMGN2P15 NAGLU RAB5C RPL27 AOC3 KCNH4 HCRT
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P15 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P15 Gene

Chromosome:
17
Start:
42,752,731 bp from pter
End:
42,753,906 bp from pter
Size:
1,176 bases
Orientation:
Minus strand

Genomic View for HMGN2P15 Gene

Genes around HMGN2P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P15 Gene

Proteins for HMGN2P15 Gene

Post-translational modifications for HMGN2P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P15 Gene

Domains & Families for HMGN2P15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P15 Gene

Function for HMGN2P15 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P15 Gene

Localization for HMGN2P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P15 Gene

Pathways & Interactions for HMGN2P15 Gene

SuperPathways for HMGN2P15 Gene

No Data Available

Interacting Proteins for HMGN2P15 Gene

Gene Ontology (GO) - Biological Process for HMGN2P15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P15 Gene

Transcripts for HMGN2P15 Gene

mRNA/cDNA for HMGN2P15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P15 Gene

No ASD Table

Relevant External Links for HMGN2P15 Gene

GeneLoc Exon Structure for
HMGN2P15
ECgene alternative splicing isoforms for
HMGN2P15

Expression for HMGN2P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGN2P15 Gene

mRNA differential expression in normal tissues according to GTEx for HMGN2P15 Gene

This gene is overexpressed in Adipose - Subcutaneous (x5.3) and Adipose - Visceral (Omentum) (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P15 Gene:

HMGN2P15
genes like me logo Genes that share expression patterns with HMGN2P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN2P15 Gene

Orthologs for HMGN2P15 Gene

Evolution for HMGN2P15 Gene

ENSEMBL:
Gene Tree for HMGN2P15 (if available)
TreeFam:
Gene Tree for HMGN2P15 (if available)

No data available for Orthologs for HMGN2P15 Gene

Paralogs for HMGN2P15 Gene

No data available for Paralogs for HMGN2P15 Gene

Variants for HMGN2P15 Gene

Relevant External Links for HMGN2P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P15 Gene

Disorders for HMGN2P15 Gene

No disorders were found for HMGN2P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P15 Gene

Publications for HMGN2P15 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN2P15 Gene

Sources for HMGN2P15 Gene

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