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Aliases for HMGN2P13 Gene

Aliases for HMGN2P13 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 13 2 3 5
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 13 2

External Ids for HMGN2P13 Gene

Previous GeneCards Identifiers for HMGN2P13 Gene

  • GC03P152787

Summaries for HMGN2P13 Gene

GeneCards Summary for HMGN2P13 Gene

HMGN2P13 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P13 Gene

Genomics for HMGN2P13 Gene

Regulatory Elements for HMGN2P13 Gene

Enhancers for HMGN2P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G153050 1.3 Ensembl ENCODE 0.4 -15.3 -15317 2.3 PKNOX1 ATF1 CREB3L1 ZNF766 CBX5 ELK1 GATA2 FOS JUNB ZNF592 HMGN2P13 GC03P153002
GH03G153057 0.9 Ensembl ENCODE 0.4 -8.8 -8788 1.5 SMARCE1 NR2F1 CEBPB ZNF507 ZNF592 FOXA1 FOSL1 ARID1B NFIC SMARCA4 HMGN2P13 GC03P153002
GH03G153042 1.2 Ensembl ENCODE 0.3 -23.7 -23698 2.1 HDAC1 ELF3 ATF1 RB1 TBL1XR1 ZBTB40 RAD21 GTF3C2 ZNF121 GATA2 HMGN2P13 GC03P153002
GH03G153028 0.7 ENCODE 0.3 -37.9 -37894 1.7 CBX3 TAL1 TCF12 GATA2 EGR1 NCOR1 ZNF600 NFE2 TRIM24 SMARCE1 ENSG00000244268 RAP2B GC03P153002 HMGN2P13
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P13 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P13 Gene

Chromosome:
3
Start:
153,067,169 bp from pter
End:
153,068,361 bp from pter
Size:
1,193 bases
Orientation:
Plus strand

Genomic View for HMGN2P13 Gene

Genes around HMGN2P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN2P13 Gene

Proteins for HMGN2P13 Gene

Post-translational modifications for HMGN2P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P13 Gene

Domains & Families for HMGN2P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P13 Gene

Function for HMGN2P13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P13 Gene

Localization for HMGN2P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P13 Gene

Pathways & Interactions for HMGN2P13 Gene

SuperPathways for HMGN2P13 Gene

No Data Available

Interacting Proteins for HMGN2P13 Gene

Gene Ontology (GO) - Biological Process for HMGN2P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P13 Gene

Drugs & Compounds for HMGN2P13 Gene

No Compound Related Data Available

Transcripts for HMGN2P13 Gene

mRNA/cDNA for HMGN2P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P13 Gene

No ASD Table

Relevant External Links for HMGN2P13 Gene

GeneLoc Exon Structure for
HMGN2P13
ECgene alternative splicing isoforms for
HMGN2P13

Expression for HMGN2P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN2P13 Gene

mRNA differential expression in normal tissues according to GTEx for HMGN2P13 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x31.4), Colon - Sigmoid (x5.2), Brain - Caudate (basal ganglia) (x4.8), and Skin - Sun Exposed (Lower leg) (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P13 Gene:

HMGN2P13
genes like me logo Genes that share expression patterns with HMGN2P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P13 Gene

Orthologs for HMGN2P13 Gene

Evolution for HMGN2P13 Gene

ENSEMBL:
Gene Tree for HMGN2P13 (if available)
TreeFam:
Gene Tree for HMGN2P13 (if available)

No data available for Orthologs for HMGN2P13 Gene

Paralogs for HMGN2P13 Gene

No data available for Paralogs for HMGN2P13 Gene

Variants for HMGN2P13 Gene

Relevant External Links for HMGN2P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P13 Gene

Disorders for HMGN2P13 Gene

No disorders were found for HMGN2P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P13 Gene

Publications for HMGN2P13 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN2P13 Gene

Sources for HMGN2P13 Gene

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