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HMGN2P1 Gene(Pseudogene)

High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 1

GCID:
GC14M023263
GIFtS:
8
Genes Participants
UDN Logo

Aliases for HMGN2P1 Gene

Aliases for HMGN2P1 Gene

  • High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 1 2 3
  • High-Mobility Group Nucleosomal Binding Domain 2-Like 1 2 3
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 1 2
  • High-Mobility Group Nucleosomal Binding Domain 2 Pseudogene 2
  • HMGN2L1 3
  • HMGN2P 3

External Ids for HMGN2P1 Gene

Previous HGNC Symbols for HMGN2P1 Gene

  • HMGN2P
  • HMGN2L1

Previous GeneCards Identifiers for HMGN2P1 Gene

  • GC14M003848
  • GC14M023733

Summaries for HMGN2P1 Gene

GeneCards Summary for HMGN2P1 Gene

HMGN2P1 (High Mobility Group Nucleosomal Binding Domain 2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN2P1 Gene

Genomics for HMGN2P1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HMGN2P1 Gene

Enhancers for HMGN2P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G023279 1.2 ENCODE dbSUPER 0.4 -16.8 -16796 2.1 HDGF PKNOX1 ATF1 CREB3L1 ARNT TCF12 ZNF766 CBX5 GATA2 FOS PABPN1 CMTM5 MIR208B ACIN1 ZFHX2-AS1 ZFHX2 HOMEZ PIR53909 HMGN2P1
GH14G023284 1.4 ENCODE dbSUPER 0.3 -22.0 -21960 3.4 HDGF HNRNPUL1 PKNOX1 FOXA2 MLX ZFP64 WRNIP1 ARID4B SIN3A FEZF1 HOMEZ RNA5SP383 LOC102724814 BCL2L2-PABPN1 PABPN1 THTPA CMTM5 ACIN1 MIR208B ZFHX2-AS1
GH14G023278 0.8 dbSUPER 0.4 -14.6 -14625 0.8 BCOR TAL1 JUN FOSL1 TCF12 FOXM1 NCOR1 NR2F6 FOS TRIM24 PABPN1 BCL2L2 CMTM5 MIR208B ACIN1 ZFHX2-AS1 ZFHX2 HOMEZ PIR53909 HMGN2P1
GH14G023276 0.4 ENCODE 0.4 -13.3 -13320 0.6 FOXA2 IRF1 PABPN1 BCL2L2 CMTM5 MIR208B ACIN1 ZFHX2-AS1 ZFHX2 PIR53909 HMGN2P1
GH14G023277 0.2 ENCODE 0.4 -13.9 -13891 0.2 PABPN1 BCL2L2 CMTM5 MIR208B ACIN1 ZFHX2-AS1 ZFHX2 PIR53909 HMGN2P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN2P1 Gene

Chromosome:
14
Start:
23,263,101 bp from pter
End:
23,263,791 bp from pter
Size:
691 bases
Orientation:
Minus strand

Genomic View for HMGN2P1 Gene

Genes around HMGN2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN2P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HMGN2P1 Gene

Proteins for HMGN2P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HMGN2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN2P1 Gene

Domains & Families for HMGN2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN2P1 Gene

Function for HMGN2P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN2P1 Gene

Localization for HMGN2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN2P1 Gene

Pathways & Interactions for HMGN2P1 Gene

SuperPathways for HMGN2P1 Gene

PathCards logo More details on SuperPathways for HMGN2P1
No Data Available

Interacting Proteins for HMGN2P1 Gene

Gene Ontology (GO) - Biological Process for HMGN2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN2P1 Gene

Drugs & Compounds for HMGN2P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HMGN2P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN2P1 Gene

No ASD Table

Relevant External Links for HMGN2P1 Gene

GeneLoc Exon Structure for
HMGN2P1
ECgene alternative splicing isoforms for
HMGN2P1

No data available for mRNA/cDNA for HMGN2P1 Gene

Expression for HMGN2P1 Gene

Products:

  1. Primer

NURSA nuclear receptor signaling pathways regulating expression of HMGN2P1 Gene:

HMGN2P1
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN2P1 Gene

Orthologs for HMGN2P1 Gene

No data available for Orthologs and Evolution for HMGN2P1 Gene

Paralogs for HMGN2P1 Gene

No data available for Paralogs for HMGN2P1 Gene

Variants for HMGN2P1 Gene

Relevant External Links for HMGN2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN2P1 Gene

Disorders for HMGN2P1 Gene

No disorders were found for HMGN2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN2P1 Gene

Publications for HMGN2P1 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN2P1 Gene

Sources for HMGN2P1 Gene

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