Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGN1P8 Gene

Subcategory (RNA class) for HMGN1P8 Gene

lncRNA

Aliases for HMGN1P8 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 8 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 8 2

External Ids for HMGN1P8 Gene

ORGUL Members for HMGN1P8 Gene

Previous GeneCards Identifiers for HMGN1P8 Gene

  • GC00U931564
  • GC03M167413

Summaries for HMGN1P8 Gene

GeneCards Summary for HMGN1P8 Gene

HMGN1P8 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 8) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P8 Gene

Genomics for HMGN1P8 Gene

Regulatory Elements for HMGN1P8 Gene

Enhancers for HMGN1P8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F168089 1 Ensembl ENCODE 24.3 -399.0 -399032 7.7 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 HMGN1P8 LINC01327 SERPINI2 GOLIM4 HMGN2P26
GH03F167732 0.8 ENCODE 23.6 -39.9 -39864 4.7 HDGF PKNOX1 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 HMGN1P8 SERPINI1 PDCD10
GH03F167691 0.7 ENCODE 0.8 +3.1 3085 0.2 PKNOX1 BMI1 EBF1 RELA CBX5 EED ETV6 CREM MTA2 CBFB SERPINI1 PDCD10 ZBBX HMGN1P8 GC03P167665
GH03F167684 0.6 ENCODE 0.4 +10.1 10055 0.2 CTCF ZNF654 CEBPB CEBPG RAD21 ATF4 ATF3 CEBPA SMC3 SERPINI1 WDR49 PDCD10 ZBBX HMGN1P8 GC03P167665
GH03F167717 0.4 ENCODE 0.3 -22.5 -22506 0.2 SOX13 TFAP4 SAP130 ARID4B CEBPG ZNF644 TEAD3 ZNF652 HOMEZ MIXL1 SERPINI1 HMGN1P8
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGN1P8 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P8 Gene

Chromosome:
3
Start:
167,694,355 bp from pter
End:
167,694,642 bp from pter
Size:
288 bases
Orientation:
Minus strand

Genomic View for HMGN1P8 Gene

Genes around HMGN1P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P8 Gene

Proteins for HMGN1P8 Gene

Post-translational modifications for HMGN1P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P8 Gene

Domains & Families for HMGN1P8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P8 Gene

Function for HMGN1P8 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P8 Gene

Localization for HMGN1P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P8 Gene

Pathways & Interactions for HMGN1P8 Gene

SuperPathways for HMGN1P8 Gene

No Data Available

Interacting Proteins for HMGN1P8 Gene

Gene Ontology (GO) - Biological Process for HMGN1P8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P8 Gene

Transcripts for HMGN1P8 Gene

mRNA/cDNA for HMGN1P8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P8 Gene

No ASD Table

Relevant External Links for HMGN1P8 Gene

GeneLoc Exon Structure for
HMGN1P8
ECgene alternative splicing isoforms for
HMGN1P8

Expression for HMGN1P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGN1P8 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P8 Gene:

HMGN1P8
genes like me logo Genes that share expression patterns with HMGN1P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN1P8 Gene

Orthologs for HMGN1P8 Gene

Evolution for HMGN1P8 Gene

ENSEMBL:
Gene Tree for HMGN1P8 (if available)
TreeFam:
Gene Tree for HMGN1P8 (if available)

No data available for Orthologs for HMGN1P8 Gene

Paralogs for HMGN1P8 Gene

No data available for Paralogs for HMGN1P8 Gene

Variants for HMGN1P8 Gene

Relevant External Links for HMGN1P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P8 Gene

Disorders for HMGN1P8 Gene

No disorders were found for HMGN1P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P8 Gene

Publications for HMGN1P8 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN1P8 Gene

Sources for HMGN1P8 Gene

Content
Loading form....