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Aliases for HMGN1P4 Gene

Aliases for HMGN1P4 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 4 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 4 2

External Ids for HMGN1P4 Gene

Summaries for HMGN1P4 Gene

GeneCards Summary for HMGN1P4 Gene

HMGN1P4 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P4 Gene

Genomics for HMGN1P4 Gene

Regulatory Elements for HMGN1P4 Gene

Enhancers for HMGN1P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F183469 0.5 ENCODE 36 -529.3 -529287 4.2 CREB3L1 MLX FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 SP3 NFYC ENSG00000224468 HMGN1P4 SMG7-AS1 ENSG00000227554 LOC100271717 RNA5SP71 LINC01688 LAMC1 SMG7 ENSG00000271387
GH01F182388 1.1 ENCODE 36 +551.7 551683 5.0 HDGF CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF143 HMGN1P4 RNASEL TEDDM2P RPL18P2 ENSG00000232309 LINC01688 RNA5SP71 LOC100271717 GLUL TEDDM1
GH01F183021 1 ENCODE 24.3 -82.2 -82177 7.0 HDGF PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 HMGN1P4 ENSG00000224468 LOC100271717 RNA5SP71 LINC01688 TEDDM2P ENSG00000232309 ENSG00000227554 RPL18P2 LAMC1
GH01F182600 0.2 ENCODE 24.2 +339.5 339542 4.0 HDGF PKNOX1 WRNIP1 SIN3A FEZF1 GLI4 ZNF2 YY1 GLIS2 ZNF143 HMGN1P4 RNASEL LINC01688 TEDDM2P RPL18P2 RNA5SP71 LOC100271717 ENSG00000232309 ENSG00000224468 LAMC1
GH01F183069 0.5 Ensembl ENCODE 20.3 -129.0 -129020 4.1 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 ZNF2 MIER2 ZNF488 TSHZ1 ENSG00000224468 HMGN1P4 LAMC1 LOC100271717 SHCBP1L
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGN1P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P4 Gene

Chromosome:
1
Start:
182,941,306 bp from pter
End:
182,942,522 bp from pter
Size:
1,217 bases
Orientation:
Minus strand

Genomic View for HMGN1P4 Gene

Genes around HMGN1P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P4 Gene

Proteins for HMGN1P4 Gene

Post-translational modifications for HMGN1P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P4 Gene

Domains & Families for HMGN1P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P4 Gene

Function for HMGN1P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P4 Gene

Localization for HMGN1P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P4 Gene

Pathways & Interactions for HMGN1P4 Gene

SuperPathways for HMGN1P4 Gene

No Data Available

Interacting Proteins for HMGN1P4 Gene

Gene Ontology (GO) - Biological Process for HMGN1P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P4 Gene

Transcripts for HMGN1P4 Gene

mRNA/cDNA for HMGN1P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P4 Gene

No ASD Table

Relevant External Links for HMGN1P4 Gene

GeneLoc Exon Structure for
HMGN1P4
ECgene alternative splicing isoforms for
HMGN1P4

Expression for HMGN1P4 Gene

mRNA expression in normal human tissues for HMGN1P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P4 Gene:

HMGN1P4
genes like me logo Genes that share expression patterns with HMGN1P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN1P4 Gene

Orthologs for HMGN1P4 Gene

Evolution for HMGN1P4 Gene

ENSEMBL:
Gene Tree for HMGN1P4 (if available)
TreeFam:
Gene Tree for HMGN1P4 (if available)

No data available for Orthologs for HMGN1P4 Gene

Paralogs for HMGN1P4 Gene

No data available for Paralogs for HMGN1P4 Gene

Variants for HMGN1P4 Gene

Relevant External Links for HMGN1P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P4 Gene

Disorders for HMGN1P4 Gene

No disorders were found for HMGN1P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P4 Gene

Publications for HMGN1P4 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN1P4 Gene

Sources for HMGN1P4 Gene

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