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Aliases for HMGN1P38 Gene

Aliases for HMGN1P38 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 38 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 38 2

External Ids for HMGN1P38 Gene

Previous GeneCards Identifiers for HMGN1P38 Gene

  • GC15P093260
  • GC15P093265
  • GC15P093268
  • GC15P093271
  • GC15P093479
  • GC15P093921
  • GC15P094237
  • GC15P094582

Summaries for HMGN1P38 Gene

GeneCards Summary for HMGN1P38 Gene

HMGN1P38 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 38) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P38 Gene

Genomics for HMGN1P38 Gene

Regulatory Elements for HMGN1P38 Gene

Enhancers for HMGN1P38 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F092800 1.1 FANTOM5 ENCODE 28.7 +95.5 95468 14.1 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 HMGN1P38 CHD2 ASB9P1 ENSG00000258922 ENSG00000274215
GH15F091860 1.2 FANTOM5 Ensembl ENCODE 20.4 -846.7 -846694 10.0 TBP PKNOX1 ZFP64 SIN3A RAD21 RCOR1 KLF7 FOS ZNF202 ZNF263 HMGN1P38 RCCD1 SLCO3A1 ASB9P1 GC15P092170
GH15F092992 0.2 ENCODE 11.4 +281.3 281285 1.0 PAF1 ZNF140 HMGN1P38 LOC105370979 CHD2 MIR3175
GH15F092509 0.2 ENCODE 11.4 -201.2 -201226 1.5 BCOR ESRRA TEAD4 ZNF140 JUND BCL11A POLR2A POU5F1 HMGN1P38 C15orf32 PIRC77
GH15F092098 0.5 ENCODE 11.4 -612.6 -612649 0.2 CTCF SMARCA4 POLR2A ZNF140 RAD21 HMGN1P38 ST8SIA2 GC15P092170 SLCO3A1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGN1P38 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P38 Gene

Chromosome:
15
Start:
92,711,694 bp from pter
End:
92,712,907 bp from pter
Size:
1,214 bases
Orientation:
Plus strand

Genomic View for HMGN1P38 Gene

Genes around HMGN1P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P38 Gene

Proteins for HMGN1P38 Gene

Post-translational modifications for HMGN1P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P38 Gene

Domains & Families for HMGN1P38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P38 Gene

Function for HMGN1P38 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P38 Gene

Localization for HMGN1P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P38 Gene

Pathways & Interactions for HMGN1P38 Gene

SuperPathways for HMGN1P38 Gene

No Data Available

Interacting Proteins for HMGN1P38 Gene

Gene Ontology (GO) - Biological Process for HMGN1P38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P38 Gene

Transcripts for HMGN1P38 Gene

mRNA/cDNA for HMGN1P38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P38 Gene

No ASD Table

Relevant External Links for HMGN1P38 Gene

GeneLoc Exon Structure for
HMGN1P38
ECgene alternative splicing isoforms for
HMGN1P38

Expression for HMGN1P38 Gene

mRNA expression in normal human tissues for HMGN1P38 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P38 Gene:

HMGN1P38
genes like me logo Genes that share expression patterns with HMGN1P38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN1P38 Gene

Orthologs for HMGN1P38 Gene

Evolution for HMGN1P38 Gene

ENSEMBL:
Gene Tree for HMGN1P38 (if available)
TreeFam:
Gene Tree for HMGN1P38 (if available)

No data available for Orthologs for HMGN1P38 Gene

Paralogs for HMGN1P38 Gene

No data available for Paralogs for HMGN1P38 Gene

Variants for HMGN1P38 Gene

Relevant External Links for HMGN1P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P38 Gene

Disorders for HMGN1P38 Gene

No disorders were found for HMGN1P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P38 Gene

Publications for HMGN1P38 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN1P38 Gene

Sources for HMGN1P38 Gene

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