Aliases for HMGN1P38 Gene
Aliases for HMGN1P38 Gene
External Ids for HMGN1P38 Gene
- HGNC: 39422
- Entrez Gene: 643790
- Ensembl: ENSG00000253954
Previous GeneCards Identifiers for HMGN1P38 Gene
- GC15P093260
- GC15P093265
- GC15P093268
- GC15P093271
- GC15P093479
- GC15P093921
- GC15P094237
- GC15P094582
Summaries for HMGN1P38 Gene
GeneCards Summary for HMGN1P38 Gene
HMGN1P38 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 38) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P38 Gene
Genomics for HMGN1P38 Gene
Regulatory Elements for HMGN1P38 Gene
Enhancers for HMGN1P38 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH15G092800 | 1.9 | FANTOM5 ENCODE dbSUPER | 19.1 | +95.5 | 95468 | 14.1 | MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 | CHD2 HMGN1P38 ASB9P1 ENSG00000258922 ENSG00000274215 |
| GH15G092816 | 2.1 | FANTOM5 Ensembl ENCODE dbSUPER | 9.8 | +108.5 | 108493 | 6.9 | HDGF PKNOX1 FOXA2 ARNT SIN3A FEZF1 DMAP1 YBX1 ZNF2 YY1 | CHD2 HMGN1P38 ENSG00000258922 RGMA ST8SIA2 ENSG00000275175 GC15P095522 |
| GH15G092847 | 1.5 | Ensembl ENCODE dbSUPER | 11.1 | +137.1 | 137102 | 3.1 | ATF1 ARNT TCF12 GTF3C2 ZNF766 GATA2 NFYC NCOA1 REST ZNF592 | CHD2 FAM174B HMGN1P38 ASB9P1 GC15P095522 ENSG00000275175 |
| GH15G092898 | 1.5 | ENCODE dbSUPER | 9.7 | +197.5 | 197476 | 20.4 | MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC | FAM174B HMGN1P38 MIR3175 LOC105370979 |
| GH15G093054 | 0.4 | dbSUPER | 5.5 | +344.1 | 344054 | 2.1 | ZSCAN5C | RGMA HMGN1P38 PIR34465 GC15M095673 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HMGN1P38 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HMGN1P38 Gene
- Chromosome:
- 15
- Start:
- 92,711,694 bp from pter
- End:
- 92,712,907 bp from pter
- Size:
- 1,214 bases
- Orientation:
- Plus strand
Genomic View for HMGN1P38 Gene
Genes around HMGN1P38 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q26.1 by Ensembl
- 15q26.1 by Entrez Gene
- 15q26.1 by HGNC
HMGN1P38 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HMGN1P38 Gene
Proteins for HMGN1P38 Gene
Post-translational modifications for HMGN1P38 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HMGN1P38
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P38
- Origene Custom Protein Services for HMGN1P38
- Search GeneTex for Proteins for HMGN1P38
Assay Products
No data available for DME Specific Peptides for HMGN1P38 Gene
Domains & Families for HMGN1P38 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P38 Gene
Function for HMGN1P38 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HMGN1P38
CRISPR Products
- Browse CRISPR knockouts for HMGN1P38
miRNA Products
- Search ViGene Biosciences for HMGN1P38
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P38
Cell Line Products
- Search ViGene Biosciences for HMGN1P38
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P38 Gene
Localization for HMGN1P38 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P38 Gene
Transcripts for HMGN1P38 Gene
mRNA/cDNA for HMGN1P38 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HMGN1P38
miRNA Products
- Search ViGene Biosciences for HMGN1P38
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P38
Flow Cytometry Products
Expression for HMGN1P38 Gene
NURSA nuclear receptor signaling pathways regulating expression of HMGN1P38 Gene:
HMGN1P38
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P38 Gene
Orthologs for HMGN1P38 Gene
No data available for Orthologs for HMGN1P38 Gene
Paralogs for HMGN1P38 Gene
No data available for Paralogs for HMGN1P38 Gene
Variants for HMGN1P38 Gene
Relevant External Links for HMGN1P38 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HMGN1P38
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P38 Gene
Disorders for HMGN1P38 Gene
No disorders were found for HMGN1P38 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P38 Gene
Publications for HMGN1P38 Gene
- Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
Products for HMGN1P38 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
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- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P38
- Origene Custom Protein Services for HMGN1P38
- Browse OriGene Inhibitory RNA Products For HMGN1P38
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HMGN1P38
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HMGN1P38
- GenScript: Custom all cDNA clones Services for HMGN1P38
- GenScript Custom Purified and Recombinant Proteins Services for HMGN1P38
- GenScript Custom Assay Services for HMGN1P38
- GenScript Custom overexpressing Cell Line Services for HMGN1P38
- Browse GenScript CRISPR for HMGN1P38
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HMGN1P38
- VectorBuilder custom plasmid, inducible vectors for HMGN1P38
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HMGN1P38
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HMGN1P38 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer