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Aliases for HMGN1P38 Gene

Aliases for HMGN1P38 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 38 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 38 2

External Ids for HMGN1P38 Gene

Previous GeneCards Identifiers for HMGN1P38 Gene

  • GC15P093260
  • GC15P093265
  • GC15P093268
  • GC15P093271
  • GC15P093479
  • GC15P093921
  • GC15P094237
  • GC15P094582

Summaries for HMGN1P38 Gene

GeneCards Summary for HMGN1P38 Gene

HMGN1P38 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 38) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P38 Gene

Genomics for HMGN1P38 Gene

Regulatory Elements for HMGN1P38 Gene

Enhancers for HMGN1P38 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G092800 1.9 FANTOM5 ENCODE dbSUPER 19.1 +95.5 95468 14.1 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 CHD2 HMGN1P38 ASB9P1 ENSG00000258922 ENSG00000274215
GH15G092816 2.1 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +108.5 108493 6.9 HDGF PKNOX1 FOXA2 ARNT SIN3A FEZF1 DMAP1 YBX1 ZNF2 YY1 CHD2 HMGN1P38 ENSG00000258922 RGMA ST8SIA2 ENSG00000275175 GC15P095522
GH15G092847 1.5 Ensembl ENCODE dbSUPER 11.1 +137.1 137102 3.1 ATF1 ARNT TCF12 GTF3C2 ZNF766 GATA2 NFYC NCOA1 REST ZNF592 CHD2 FAM174B HMGN1P38 ASB9P1 GC15P095522 ENSG00000275175
GH15G092898 1.5 ENCODE dbSUPER 9.7 +197.5 197476 20.4 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC FAM174B HMGN1P38 MIR3175 LOC105370979
GH15G093054 0.4 dbSUPER 5.5 +344.1 344054 2.1 ZSCAN5C RGMA HMGN1P38 PIR34465 GC15M095673
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P38 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P38 Gene

Chromosome:
15
Start:
92,711,694 bp from pter
End:
92,712,907 bp from pter
Size:
1,214 bases
Orientation:
Plus strand

Genomic View for HMGN1P38 Gene

Genes around HMGN1P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P38 Gene

Proteins for HMGN1P38 Gene

Post-translational modifications for HMGN1P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P38 Gene

Domains & Families for HMGN1P38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P38 Gene

Function for HMGN1P38 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P38 Gene

Localization for HMGN1P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P38 Gene

Pathways & Interactions for HMGN1P38 Gene

SuperPathways for HMGN1P38 Gene

No Data Available

Interacting Proteins for HMGN1P38 Gene

Gene Ontology (GO) - Biological Process for HMGN1P38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P38 Gene

Transcripts for HMGN1P38 Gene

mRNA/cDNA for HMGN1P38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P38 Gene

No ASD Table

Relevant External Links for HMGN1P38 Gene

GeneLoc Exon Structure for
HMGN1P38
ECgene alternative splicing isoforms for
HMGN1P38

Expression for HMGN1P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P38 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P38 Gene:

HMGN1P38
genes like me logo Genes that share expression patterns with HMGN1P38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P38 Gene

Orthologs for HMGN1P38 Gene

Evolution for HMGN1P38 Gene

ENSEMBL:
Gene Tree for HMGN1P38 (if available)
TreeFam:
Gene Tree for HMGN1P38 (if available)

No data available for Orthologs for HMGN1P38 Gene

Paralogs for HMGN1P38 Gene

No data available for Paralogs for HMGN1P38 Gene

Variants for HMGN1P38 Gene

Relevant External Links for HMGN1P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P38 Gene

Disorders for HMGN1P38 Gene

No disorders were found for HMGN1P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P38 Gene

Publications for HMGN1P38 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN1P38 Gene

Sources for HMGN1P38 Gene

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