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Aliases for HMGN1P37 Gene

Subcategory (RNA class) for HMGN1P37 Gene

lncRNA

Aliases for HMGN1P37 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 37 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 37 2
  • HCG17955 3

External Ids for HMGN1P37 Gene

ORGUL Members for HMGN1P37 Gene

Previous GeneCards Identifiers for HMGN1P37 Gene

  • GC0XM154046

Summaries for HMGN1P37 Gene

GeneCards Summary for HMGN1P37 Gene

HMGN1P37 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 37) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P37 Gene

Genomics for HMGN1P37 Gene

Regulatory Elements for HMGN1P37 Gene

Enhancers for HMGN1P37 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF154818 0.9 ENCODE 0.8 -3.0 -2997 4.4 HDAC1 PKNOX1 ATF1 NFRKB ZNF133 SIN3A RAD21 ELK1 SCRT2 SIRT6 F8A1 TMLHE FAM3A HMGN1P37 MPP1
GH0XF154796 1.5 FANTOM5 ENCODE 0.3 +16.1 16121 10.1 PKNOX1 ARNT CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 FOS KLF13 F8A1 SNORA56 F8A2 EMD SNORA70 SNORA36A DKC1 MIR664B IKBKG TMLHE
GH0XF154794 1.3 FANTOM5 Ensembl ENCODE 0.3 +22.3 22345 1.6 SCRT1 MAZ HLF ZNF664 ZFP69B ZNF335 ZNF692 POLR2A GABPB1 CEBPA F8A1 SNORA36A DKC1 MIR664B MPP1 SNORA56 F8A2 FAM3A IKBKG GAB3
GH0XF154783 1.1 Ensembl ENCODE 0.3 +33.2 33154 1.9 DMAP1 ZNF2 THRB RARA GATA2 ZBTB2 SMAD5 USF2 ZEB2 POLR2H MIR664B DKC1 FAM3A LCA10 SNORA56 HMGN1P37
GH0XF154778 0.7 ENCODE 0.3 +38.4 38392 1.5 HDGF PKNOX1 ZNF384 BMI1 ZFHX2 POLR2A EED EGR2 MTA2 TRIM22 SNORA56 HMGN1P37
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P37 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P37 Gene

Chromosome:
X
Start:
154,816,299 bp from pter
End:
154,817,521 bp from pter
Size:
1,223 bases
Orientation:
Minus strand

Genomic View for HMGN1P37 Gene

Genes around HMGN1P37 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P37 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P37 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P37 Gene

Proteins for HMGN1P37 Gene

Post-translational modifications for HMGN1P37 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P37 Gene

Domains & Families for HMGN1P37 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P37 Gene

Function for HMGN1P37 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P37 Gene

Localization for HMGN1P37 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P37 Gene

Pathways & Interactions for HMGN1P37 Gene

SuperPathways for HMGN1P37 Gene

No Data Available

Interacting Proteins for HMGN1P37 Gene

Gene Ontology (GO) - Biological Process for HMGN1P37 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P37 Gene

Transcripts for HMGN1P37 Gene

mRNA/cDNA for HMGN1P37 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P37 Gene

No ASD Table

Relevant External Links for HMGN1P37 Gene

GeneLoc Exon Structure for
HMGN1P37
ECgene alternative splicing isoforms for
HMGN1P37

Expression for HMGN1P37 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGN1P37 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P37 Gene:

HMGN1P37
genes like me logo Genes that share expression patterns with HMGN1P37: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN1P37 Gene

Orthologs for HMGN1P37 Gene

Evolution for HMGN1P37 Gene

ENSEMBL:
Gene Tree for HMGN1P37 (if available)
TreeFam:
Gene Tree for HMGN1P37 (if available)

No data available for Orthologs for HMGN1P37 Gene

Paralogs for HMGN1P37 Gene

No data available for Paralogs for HMGN1P37 Gene

Variants for HMGN1P37 Gene

Relevant External Links for HMGN1P37 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P37

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P37 Gene

Disorders for HMGN1P37 Gene

No disorders were found for HMGN1P37 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P37 Gene

Publications for HMGN1P37 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for HMGN1P37 Gene

Sources for HMGN1P37 Gene

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