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Aliases for HMGN1P36 Gene

Aliases for HMGN1P36 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 36 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 36 2

External Ids for HMGN1P36 Gene

Previous GeneCards Identifiers for HMGN1P36 Gene

  • GC02P098446

Summaries for HMGN1P36 Gene

GeneCards Summary for HMGN1P36 Gene

HMGN1P36 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 36) is a Pseudogene.

Additional gene information for HMGN1P36 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P36 Gene

Genomics for HMGN1P36 Gene

GeneHancer (GH) Regulatory Elements for HMGN1P36 Gene

Promoters and enhancers for HMGN1P36 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I097826 Enhancer 0.5 FANTOM5 550.8 -0.2 -198 0.4 HDGF TARDBP ZNF512 NBN YBX1 GC02P097828 HMGN1P36 ZAP70 TMEM131
GH02I097746 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -79.4 -79362 2.4 MEIS2 CTCF PKNOX1 PYGO2 RAD21 POLR2A ZNF143 NR2F6 PRDM10 SMARCE1 ANKRD36B ACTR1B TMEM131 ZAP70 HMGN1P36
GH02I097806 Enhancer 0.8 ENCODE 0.3 -20.2 -20229 0.2 CTCF RB1 ARID4B MAX EBF1 ZNF2 IRF4 RAD21 TEAD3 CC2D1A HMGN1P36 ZAP70 TMEM131
GH02I097740 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.2 -86.3 -86318 0.6 HDGF ELF3 PKNOX1 RB1 FEZF1 THRB ZNF48 RAD21 RARA SCRT2 ANKRD36B ZAP70 HMGN1P36
GH02I097712 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.1 -110.9 -110927 7.6 PKNOX1 ATF1 TCF12 ZNF766 CAVIN1 ZNF592 KAT8 MEF2D MIER3 SMARCA4 ZAP70 ANKRD36B LMAN2L UNC50 ACTR1B ANKRD36 CNNM3 SEMA4C TMEM131 FAHD2B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGN1P36 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGN1P36 Gene

Genomic Locations for HMGN1P36 Gene
chr2:97,827,152-97,828,350
(GRCh38/hg38)
Size:
1,199 bases
Orientation:
Plus strand
chr2:98,443,615-98,444,813
(GRCh37/hg19)

Genomic View for HMGN1P36 Gene

Genes around HMGN1P36 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P36 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P36 Gene

Proteins for HMGN1P36 Gene

Post-translational modifications for HMGN1P36 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P36 Gene

Domains & Families for HMGN1P36 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P36 Gene

Function for HMGN1P36 Gene

Phenotypes From GWAS Catalog for HMGN1P36 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P36 Gene

Localization for HMGN1P36 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P36 Gene

Pathways & Interactions for HMGN1P36 Gene

SuperPathways for HMGN1P36 Gene

No Data Available

Interacting Proteins for HMGN1P36 Gene

Gene Ontology (GO) - Biological Process for HMGN1P36 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P36 Gene

Drugs & Compounds for HMGN1P36 Gene

No Compound Related Data Available

Transcripts for HMGN1P36 Gene

mRNA/cDNA for HMGN1P36 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P36 Gene

No ASD Table

Relevant External Links for HMGN1P36 Gene

GeneLoc Exon Structure for
HMGN1P36
ECgene alternative splicing isoforms for
HMGN1P36

Expression for HMGN1P36 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P36 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P36 Gene:

HMGN1P36
genes like me logo Genes that share expression patterns with HMGN1P36: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P36 Gene

Orthologs for HMGN1P36 Gene

Evolution for HMGN1P36 Gene

ENSEMBL:
Gene Tree for HMGN1P36 (if available)
TreeFam:
Gene Tree for HMGN1P36 (if available)

No data available for Orthologs for HMGN1P36 Gene

Paralogs for HMGN1P36 Gene

No data available for Paralogs for HMGN1P36 Gene

Variants for HMGN1P36 Gene

Additional Variant Information for HMGN1P36 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P36 Gene

Disorders for HMGN1P36 Gene

No disorders were found for HMGN1P36 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P36 Gene

Publications for HMGN1P36 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGN1P36 Gene

Sources for HMGN1P36 Gene

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