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Aliases for HMGN1P36 Gene

Aliases for HMGN1P36 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 36 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 36 2

External Ids for HMGN1P36 Gene

Previous GeneCards Identifiers for HMGN1P36 Gene

  • GC02P098446

Summaries for HMGN1P36 Gene

GeneCards Summary for HMGN1P36 Gene

HMGN1P36 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 36) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P36 Gene

Genomics for HMGN1P36 Gene

Regulatory Elements for HMGN1P36 Gene

Enhancers for HMGN1P36 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G097826 0.6 FANTOM5 0.7 -0.2 -199 0.4 HDGF TARDBP ZNF512 NBN YBX1 HMGN1P36 ZAP70
GH02G097746 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -79.4 -79362 2.4 CTCF PKNOX1 RAD21 ZNF143 NR2F6 SMARCE1 HCFC1 L3MBTL2 CEBPB REST ANKRD36B ACTR1B TMEM131 ZAP70 HMGN1P36
GH02G097740 1.4 Ensembl ENCODE dbSUPER 0.2 -86.3 -86318 0.6 ELF3 HDGF PKNOX1 CBX3 RB1 TBL1XR1 FEZF1 THRB ZNF48 RAD21 ANKRD36B ZAP70 HMGN1P36
GH02G097806 0.8 ENCODE 0.3 -20.2 -20230 0.2 CTCF RB1 ARID4B MAX EBF1 ZNF2 RAD21 TEAD3 GATA3 ZNF143 HMGN1P36 ZAP70
GH02G097745 1.2 Ensembl ENCODE dbSUPER 0.2 -81.3 -81279 0.6 PKNOX1 MTA2 L3MBTL2 BHLHE40 CBFB JUNB BMI1 DPF2 TBX21 ARID3A ZAP70 HMGN1P36
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P36 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P36 Gene

Chromosome:
2
Start:
97,827,152 bp from pter
End:
97,828,350 bp from pter
Size:
1,199 bases
Orientation:
Plus strand

Genomic View for HMGN1P36 Gene

Genes around HMGN1P36 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P36 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P36 Gene

Proteins for HMGN1P36 Gene

Post-translational modifications for HMGN1P36 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P36 Gene

Domains & Families for HMGN1P36 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P36 Gene

Function for HMGN1P36 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P36 Gene

Localization for HMGN1P36 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P36 Gene

Pathways & Interactions for HMGN1P36 Gene

SuperPathways for HMGN1P36 Gene

No Data Available

Interacting Proteins for HMGN1P36 Gene

Gene Ontology (GO) - Biological Process for HMGN1P36 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P36 Gene

Drugs & Compounds for HMGN1P36 Gene

No Compound Related Data Available

Transcripts for HMGN1P36 Gene

mRNA/cDNA for HMGN1P36 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P36 Gene

No ASD Table

Relevant External Links for HMGN1P36 Gene

GeneLoc Exon Structure for
HMGN1P36
ECgene alternative splicing isoforms for
HMGN1P36

Expression for HMGN1P36 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P36 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P36 Gene:

HMGN1P36
genes like me logo Genes that share expression patterns with HMGN1P36: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P36 Gene

Orthologs for HMGN1P36 Gene

Evolution for HMGN1P36 Gene

ENSEMBL:
Gene Tree for HMGN1P36 (if available)
TreeFam:
Gene Tree for HMGN1P36 (if available)

No data available for Orthologs for HMGN1P36 Gene

Paralogs for HMGN1P36 Gene

No data available for Paralogs for HMGN1P36 Gene

Variants for HMGN1P36 Gene

Relevant External Links for HMGN1P36 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P36 Gene

Disorders for HMGN1P36 Gene

No disorders were found for HMGN1P36 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P36 Gene

Publications for HMGN1P36 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN1P36 Gene

Sources for HMGN1P36 Gene

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