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HMGN1P31 Gene(Pseudogene)

High Mobility Group Nucleosome Binding Domain 1 Pseudogene 31

GCID:
GC18M060794
GIFtS:
14
Genes Participants
UDN Logo

Aliases for HMGN1P31 Gene

Subcategory (RNA class) for HMGN1P31 Gene

lncRNA

Aliases for HMGN1P31 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 31 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 31 2
  • HCG1659830 3

External Ids for HMGN1P31 Gene

ORGUL Members for HMGN1P31 Gene

Previous GeneCards Identifiers for HMGN1P31 Gene

  • GC18U900627
  • GC18M058463

Summaries for HMGN1P31 Gene

GeneCards Summary for HMGN1P31 Gene

HMGN1P31 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 31) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P31 Gene

Genomics for HMGN1P31 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HMGN1P31 Gene

Enhancers for HMGN1P31 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18G060804 0.5 ENCODE 0.4 -9.7 -9707 0.1 BCL11A POLR2A POU5F1 CHD7 HMGN1P31 ENSG00000267098
GH18G060891 0.8 ENCODE 0.1 -98.5 -98472 3.9 NFIB JUN MAX CEBPG BMI1 GTF3C2 ARID3A GATA3 GATA2 POLR2A ENSG00000267098 HMGN1P31
GH18G060693 0.6 ENCODE 0.1 +101.3 101263 1.0 JUN ZSCAN4 FEZF1 FOS ZNF843 ZXDB GC18P060676 HMGN1P31
GH18G060855 0.3 FANTOM5 0.2 -60.8 -60783 0.3 ENSG00000267098 HMGN1P31
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P31 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P31 Gene

Chromosome:
18
Start:
60,794,607 bp from pter
End:
60,794,916 bp from pter
Size:
310 bases
Orientation:
Minus strand

Genomic View for HMGN1P31 Gene

Genes around HMGN1P31 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P31 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P31 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HMGN1P31 Gene

Proteins for HMGN1P31 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HMGN1P31 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P31 Gene

Domains & Families for HMGN1P31 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P31 Gene

Function for HMGN1P31 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Phenotypes for HMGN1P31 Gene

GenomeRNAi human phenotypes for HMGN1P31:
genes like me logo Genes that share phenotypes with HMGN1P31: view

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P31 Gene

Localization for HMGN1P31 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P31 Gene

Pathways & Interactions for HMGN1P31 Gene

SuperPathways for HMGN1P31 Gene

PathCards logo More details on SuperPathways for HMGN1P31
No Data Available

Interacting Proteins for HMGN1P31 Gene

Gene Ontology (GO) - Biological Process for HMGN1P31 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P31 Gene

Drugs & Compounds for HMGN1P31 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HMGN1P31 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HMGN1P31 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P31 Gene

No ASD Table

Relevant External Links for HMGN1P31 Gene

GeneLoc Exon Structure for
HMGN1P31
ECgene alternative splicing isoforms for
HMGN1P31

Expression for HMGN1P31 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P31 Gene

mRNA expression in normal human tissues for HMGN1P31 Gene
mRNA expression by GTEx for HMGN1P31 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P31 Gene:

HMGN1P31
genes like me logo Genes that share expression patterns with HMGN1P31: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P31 Gene

Orthologs for HMGN1P31 Gene

Evolution for HMGN1P31 Gene

ENSEMBL:
Gene Tree for HMGN1P31 (if available)
TreeFam:
Gene Tree for HMGN1P31 (if available)

No data available for Orthologs for HMGN1P31 Gene

Paralogs for HMGN1P31 Gene

No data available for Paralogs for HMGN1P31 Gene

Variants for HMGN1P31 Gene

Relevant External Links for HMGN1P31 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P31 Gene

Disorders for HMGN1P31 Gene

No disorders were found for HMGN1P31 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P31 Gene

Publications for HMGN1P31 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for HMGN1P31 Gene

Sources for HMGN1P31 Gene

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