Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGN1P29 Gene

Aliases for HMGN1P29 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 29 2 3
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 29 2
  • AC135721.2 5

External Ids for HMGN1P29 Gene

Previous GeneCards Identifiers for HMGN1P29 Gene

  • GC00U931461
  • GC17U901745

Summaries for HMGN1P29 Gene

GeneCards Summary for HMGN1P29 Gene

HMGN1P29 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 29) is a Pseudogene.

Additional gene information for HMGN1P29 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P29 Gene

Genomics for HMGN1P29 Gene

Regulatory Elements for HMGN1P29 Gene

Enhancers for HMGN1P29 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H043322 1.7 Ensembl ENCODE dbSUPER 132.9 +178.2 178207 1 MLX ZFP64 YBX1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 NFYC ENSG00000267340 UBTF ASB16-AS1 ENSG00000267002 DHX8 HMGN1P29 TMUB2 NBR2 PLEKHH3 LINC00910
GH17H043366 1.7 Ensembl ENCODE dbSUPER 77.8 +223.8 223759 4 HNRNPUL1 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 DHX8 NBR2 HMGN1P29 ASB16-AS1 LINC00910 TMUB2 UBTF ENSG00000267340 PSME3 NBR1
GH17H042420 1.7 FANTOM5 ENCODE dbSUPER 32.9 -723.0 -723013 5 PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF416 LINC00910 HMGN1P29 NBR2 ENSG00000267758 DHX58 PSME3 CNTD1 CAVIN1 RETREG3 TUBG2
GH17H042308 2 FANTOM5 Ensembl ENCODE dbSUPER 22.4 -828.9 -828900 15 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZC3H11A MEF2D SSRP1 GLIS1 ENSG00000267340 HMGN1P29 ACLY STAT5A ENSG00000267002 PLEKHH3 STAT5B ATP6V0A1 CAVIN1 HSD17B1
GH17H043314 1.6 Ensembl ENCODE dbSUPER 23 +171.0 170957 2 HNRNPUL1 PKNOX1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF302 ZNF143 ZNF207 NBR2 DHX8 ASB16-AS1 HMGN1P29 TMUB2 LINC00910 PLEKHH3 RPL27 PSMC3IP NBR1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P29 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P29 Gene

Chromosome:
17
Start:
43,144,956 bp from pter
End:
43,145,255 bp from pter
Size:
300 bases
Orientation:
Plus strand

Genomic View for HMGN1P29 Gene

Genes around HMGN1P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P29 Gene

Proteins for HMGN1P29 Gene

Post-translational modifications for HMGN1P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P29 Gene

Domains & Families for HMGN1P29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P29 Gene

Function for HMGN1P29 Gene

Phenotypes From GWAS Catalog for HMGN1P29 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN1P29
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P29 Gene

Localization for HMGN1P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P29 Gene

Pathways & Interactions for HMGN1P29 Gene

SuperPathways for HMGN1P29 Gene

No Data Available

Interacting Proteins for HMGN1P29 Gene

Gene Ontology (GO) - Biological Process for HMGN1P29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P29 Gene

Drugs & Compounds for HMGN1P29 Gene

No Compound Related Data Available

Transcripts for HMGN1P29 Gene

mRNA/cDNA for HMGN1P29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN1P29
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P29 Gene

No ASD Table

Relevant External Links for HMGN1P29 Gene

GeneLoc Exon Structure for
HMGN1P29
ECgene alternative splicing isoforms for
HMGN1P29

Expression for HMGN1P29 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P29 Gene:

HMGN1P29
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P29 Gene

Orthologs for HMGN1P29 Gene

Evolution for HMGN1P29 Gene

ENSEMBL:
Gene Tree for HMGN1P29 (if available)
TreeFam:
Gene Tree for HMGN1P29 (if available)

No data available for Orthologs for HMGN1P29 Gene

Paralogs for HMGN1P29 Gene

No data available for Paralogs for HMGN1P29 Gene

Variants for HMGN1P29 Gene

Relevant External Links for HMGN1P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P29 Gene

Disorders for HMGN1P29 Gene

No disorders were found for HMGN1P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P29 Gene

Publications for HMGN1P29 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60
  2. Functional characterization of BRCA1 gene variants by mini-gene splicing assay. (PMID: 24667779) Steffensen AY … Hansen Tv (European journal of human genetics : EJHG 2014) 3 60
  3. A de novo complete BRCA1 gene deletion identified in a Spanish woman with early bilateral breast cancer. (PMID: 21989022) Garcia-Casado Z … Lopez-Guerrero JA (BMC medical genetics 2011) 3 60

Products for HMGN1P29 Gene

Sources for HMGN1P29 Gene

Content
Loading form....