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Aliases for HMGN1P27 Gene

Aliases for HMGN1P27 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 27 2 3
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 27 2
  • AC087465.1 5

External Ids for HMGN1P27 Gene

Previous GeneCards Identifiers for HMGN1P27 Gene

  • GC00U931577
  • GC15U901476

Summaries for HMGN1P27 Gene

GeneCards Summary for HMGN1P27 Gene

HMGN1P27 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 27) is a Pseudogene.

Additional gene information for HMGN1P27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P27 Gene

Genomics for HMGN1P27 Gene

Regulatory Elements for HMGN1P27 Gene

Enhancers for HMGN1P27 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H077185 1.5 FANTOM5 Ensembl ENCODE 0.4 -16.6 -16649 4 RB1 BMI1 BATF RAD21 ZNF207 ATF7 ETV6 RUNX3 CREM IKZF2 HMG20A LOC101929457 PSTPIP1 HMGN1P27 GC15M077111 PIR35714
GH15H077178 1.1 Ensembl ENCODE 0.3 -23.4 -23425 4 PKNOX1 RB1 BMI1 BATF RAD21 ZNF143 ZNF207 ATF7 ETV6 RUNX3 LINGO1 HMG20A TSPAN3 PEAK1 LOC101929457 HMGN1P27 GC15M077111 PIR35714
GH15H077159 1 Ensembl ENCODE 0.3 -43.5 -43507 2 NFIB ARID4B RAD21 CTBP1 HNF4G NR2F6 RUNX3 GATAD2A SMARCE1 NFIA PEAK1 CSPG4P13 ENSG00000261244 HMGN1P27 PIR35714 GC15M077111
GH15H077186 0.5 Ensembl 0.4 -19.0 -18978 0 IKZF1 ATF7 ETV6 IKZF2 PEAK1 LOC101929457 HMGN1P27 GC15M077111 PIR35714
GH15H077118 0.8 Ensembl ENCODE 0.2 -85.5 -85478 0 CTCF ZNF654 SMC3 ZNF143 REST RAD21 DEK PIR35714 GC15M077111 HMGN1P27
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P27 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P27 Gene

Chromosome:
15
Start:
77,204,578 bp from pter
End:
77,205,415 bp from pter
Size:
838 bases
Orientation:
Plus strand

Genomic View for HMGN1P27 Gene

Genes around HMGN1P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P27 Gene

Proteins for HMGN1P27 Gene

Post-translational modifications for HMGN1P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P27 Gene

Domains & Families for HMGN1P27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P27 Gene

Function for HMGN1P27 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN1P27
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P27 Gene

Localization for HMGN1P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P27 Gene

Pathways & Interactions for HMGN1P27 Gene

SuperPathways for HMGN1P27 Gene

No Data Available

Interacting Proteins for HMGN1P27 Gene

Gene Ontology (GO) - Biological Process for HMGN1P27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P27 Gene

Drugs & Compounds for HMGN1P27 Gene

No Compound Related Data Available

Transcripts for HMGN1P27 Gene

mRNA/cDNA for HMGN1P27 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN1P27
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P27 Gene

No ASD Table

Relevant External Links for HMGN1P27 Gene

GeneLoc Exon Structure for
HMGN1P27
ECgene alternative splicing isoforms for
HMGN1P27

Expression for HMGN1P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P27 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P27 Gene:

HMGN1P27
genes like me logo Genes that share expression patterns with HMGN1P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P27 Gene

Orthologs for HMGN1P27 Gene

Evolution for HMGN1P27 Gene

ENSEMBL:
Gene Tree for HMGN1P27 (if available)
TreeFam:
Gene Tree for HMGN1P27 (if available)

No data available for Orthologs for HMGN1P27 Gene

Paralogs for HMGN1P27 Gene

No data available for Paralogs for HMGN1P27 Gene

Variants for HMGN1P27 Gene

Relevant External Links for HMGN1P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P27 Gene

Disorders for HMGN1P27 Gene

No disorders were found for HMGN1P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P27 Gene

Publications for HMGN1P27 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60

Products for HMGN1P27 Gene

Sources for HMGN1P27 Gene

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