Aliases for HMGN1P27 Gene
Aliases for HMGN1P27 Gene
External Ids for HMGN1P27 Gene
- HGNC: 39371
- Entrez Gene: 100874463
- Ensembl: ENSG00000259722
Previous GeneCards Identifiers for HMGN1P27 Gene
- GC00U931577
- GC15U901476
Summaries for HMGN1P27 Gene
GeneCards Summary for HMGN1P27 Gene
HMGN1P27 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 27) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P27 Gene
Genomics for HMGN1P27 Gene
Regulatory Elements for HMGN1P27 Gene
Enhancers for HMGN1P27 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH15G077185 | 1.5 | FANTOM5 Ensembl ENCODE | 0.4 | -16.6 | -16649 | 4.0 | BMI1 RAD21 GATA2 ZNF207 FOS RELB ETV6 IKZF2 CREM CBFB | HMG20A LOC101929457 PSTPIP1 HMGN1P27 GC15M077111 PIR35714 |
| GH15G077178 | 1.1 | Ensembl ENCODE | 0.3 | -23.4 | -23425 | 4.6 | PKNOX1 WRNIP1 BMI1 RAD21 ZNF207 RELB ETV6 IKZF2 CREM JUNB | LINGO1 HMG20A TSPAN3 PEAK1 LOC101929457 HMGN1P27 PIR35714 GC15M077111 |
| GH15G077159 | 1 | Ensembl ENCODE | 0.3 | -43.5 | -43507 | 2.4 | NFIB ARID4B RAD21 CTBP1 NCOR1 HNF4G NR2F6 MAFK ZNF652 GATAD2A | PEAK1 CSPG4P13 ENSG00000261244 HMGN1P27 GC15M077111 PIR35714 |
| GH15G077118 | 1 | Ensembl ENCODE | 0.2 | -85.5 | -85478 | 0.6 | CTCF PKNOX1 BACH1 BMI1 RAD21 ARID3A ZNF143 SMC3 RELB IKZF2 | GC15M077111 PIR35714 HMGN1P27 |
| GH15G077186 | 0.5 | Ensembl | 0.4 | -19.0 | -18978 | 0.4 | IKZF1 ETV6 TBX21 | PEAK1 LOC101929457 HMGN1P27 PIR35714 GC15M077111 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HMGN1P27 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HMGN1P27 Gene
- Chromosome:
- 15
- Start:
- 77,204,578 bp from pter
- End:
- 77,205,415 bp from pter
- Size:
- 838 bases
- Orientation:
- Plus strand
Genomic View for HMGN1P27 Gene
Genes around HMGN1P27 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q24.3 by Ensembl
- 15q24.3 by Entrez Gene
- 15q24.3 by HGNC
HMGN1P27 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HMGN1P27 Gene
Proteins for HMGN1P27 Gene
Post-translational modifications for HMGN1P27 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HMGN1P27
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P27
- Origene Custom Protein Services for HMGN1P27
- Search GeneTex for Proteins for HMGN1P27
Assay Products
No data available for DME Specific Peptides for HMGN1P27 Gene
Domains & Families for HMGN1P27 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P27 Gene
Function for HMGN1P27 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HMGN1P27
CRISPR Products
- Browse CRISPR knockouts for HMGN1P27
miRNA Products
- Search ViGene Biosciences for HMGN1P27
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P27
Cell Line Products
- Search ViGene Biosciences for HMGN1P27
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P27 Gene
Localization for HMGN1P27 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P27 Gene
Transcripts for HMGN1P27 Gene
mRNA/cDNA for HMGN1P27 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HMGN1P27
miRNA Products
- Search ViGene Biosciences for HMGN1P27
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P27
Flow Cytometry Products
Expression for HMGN1P27 Gene
NURSA nuclear receptor signaling pathways regulating expression of HMGN1P27 Gene:
HMGN1P27
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P27 Gene
Orthologs for HMGN1P27 Gene
No data available for Orthologs for HMGN1P27 Gene
Paralogs for HMGN1P27 Gene
No data available for Paralogs for HMGN1P27 Gene
Variants for HMGN1P27 Gene
Relevant External Links for HMGN1P27 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HMGN1P27
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P27 Gene
Disorders for HMGN1P27 Gene
No disorders were found for HMGN1P27 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P27 Gene
Publications for HMGN1P27 Gene
- Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
Products for HMGN1P27 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
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- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
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- Browse Immunoprecipitation Assays
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- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P27
- Origene Custom Protein Services for HMGN1P27
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- Browse CRISPR knockouts for HMGN1P27
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HMGN1P27
- GenScript: Custom all cDNA clones Services for HMGN1P27
- GenScript Custom Purified and Recombinant Proteins Services for HMGN1P27
- GenScript Custom Assay Services for HMGN1P27
- GenScript Custom overexpressing Cell Line Services for HMGN1P27
- Browse GenScript CRISPR for HMGN1P27
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Antibodies
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- Sino Biological Cell Lysates
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- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HMGN1P27
- VectorBuilder custom plasmid, inducible vectors for HMGN1P27
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HMGN1P27
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HMGN1P27 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
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- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer