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Aliases for HMGN1P22 Gene

Subcategory (RNA class) for HMGN1P22 Gene

lncRNA

Aliases for HMGN1P22 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 22 2 3
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 22 2
  • AC111188.3 5

External Ids for HMGN1P22 Gene

ORGUL Members for HMGN1P22 Gene

Previous GeneCards Identifiers for HMGN1P22 Gene

  • GC00U931412
  • GC11U901940

Summaries for HMGN1P22 Gene

GeneCards Summary for HMGN1P22 Gene

HMGN1P22 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 22) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HMGN1P22 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P22 Gene

Genomics for HMGN1P22 Gene

Regulatory Elements for HMGN1P22 Gene

Enhancers for HMGN1P22 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H011170 0.8 ENCODE 0.4 +10.5 10488 2 PKNOX1 EBF1 RELA EED ATF7 RUNX3 IKZF2 SMARCA5 ZNF687 NR2F1 HMGN1P22 LOC105376548
GH11H011178 0.4 ENCODE 0.7 +3.0 2963 1 JUND HMGN1P22 LOC105376548
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P22 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P22 Gene

Chromosome:
11
Start:
11,181,808 bp from pter
End:
11,182,413 bp from pter
Size:
606 bases
Orientation:
Minus strand

Genomic View for HMGN1P22 Gene

Genes around HMGN1P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P22 Gene

Proteins for HMGN1P22 Gene

Post-translational modifications for HMGN1P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P22 Gene

Domains & Families for HMGN1P22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P22 Gene

Function for HMGN1P22 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN1P22
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P22 Gene

Localization for HMGN1P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGN1P22 Gene

Pathways & Interactions for HMGN1P22 Gene

SuperPathways for HMGN1P22 Gene

No Data Available

Interacting Proteins for HMGN1P22 Gene

Gene Ontology (GO) - Biological Process for HMGN1P22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P22 Gene

Drugs & Compounds for HMGN1P22 Gene

No Compound Related Data Available

Transcripts for HMGN1P22 Gene

mRNA/cDNA for HMGN1P22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGN1P22
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P22 Gene

No ASD Table

Relevant External Links for HMGN1P22 Gene

GeneLoc Exon Structure for
HMGN1P22
ECgene alternative splicing isoforms for
HMGN1P22

Expression for HMGN1P22 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P22 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P22 Gene:

HMGN1P22
genes like me logo Genes that share expression patterns with HMGN1P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P22 Gene

Orthologs for HMGN1P22 Gene

Evolution for HMGN1P22 Gene

ENSEMBL:
Gene Tree for HMGN1P22 (if available)
TreeFam:
Gene Tree for HMGN1P22 (if available)

No data available for Orthologs for HMGN1P22 Gene

Paralogs for HMGN1P22 Gene

No data available for Paralogs for HMGN1P22 Gene

Variants for HMGN1P22 Gene

Relevant External Links for HMGN1P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P22 Gene

Disorders for HMGN1P22 Gene

No disorders were found for HMGN1P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P22 Gene

Publications for HMGN1P22 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60

Products for HMGN1P22 Gene

Sources for HMGN1P22 Gene

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